RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-212ENST00000550800 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
TMEM116-212ENST00000550800 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-212ENST00000550800 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
TMEM116-212ENST00000550800 PLPPR3Q6T4P5 718 aa10.89□□□□□ -0.67
TMEM116-212ENST00000550800 FOXD1Q16676 465 aa10.6□□□□□ -0.71
TMEM116-212ENST00000550800 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
TMEM116-212ENST00000550800 ADRA2BP18089 450 aa10.2□□□□□ -0.78
TMEM116-212ENST00000550800 PPP6R1Q9UPN7 881 aa10.18□□□□□ -0.78
TMEM116-212ENST00000550800 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
TMEM116-212ENST00000550800 MSH5O43196 834 aa9.9□□□□□ -0.82
TMEM116-212ENST00000550800 MYT1Q01538 1121 aa9.73□□□□□ -0.85
TMEM116-212ENST00000550800 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
TMEM116-212ENST00000550800 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
TMEM116-212ENST00000550800 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
TMEM116-212ENST00000550800 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-212ENST00000550800 NCBP3Q53F19 620 aaKnown RBP9.43□□□□□ -0.9
TMEM116-212ENST00000550800 KCNA4P22459 653 aa9.34□□□□□ -0.91
TMEM116-212ENST00000550800 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
TMEM116-212ENST00000550800 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
TMEM116-212ENST00000550800 MAPK8IP2Q13387 824 aaPredicted RBP9.19□□□□□ -0.94
TMEM116-212ENST00000550800 NPM3O75607 178 aaKnown RBP9.15□□□□□ -0.94
TMEM116-212ENST00000550800 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-212ENST00000550800 HOXD11P31277 338 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-212ENST00000550800 DNAJC5BQ9UF47 199 aa9.02□□□□□ -0.97
TMEM116-212ENST00000550800 SLC4A1APQ9BWU0 796 aaKnown RBP8.98□□□□□ -0.97
TMEM116-212ENST00000550800 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
TMEM116-212ENST00000550800 DCAF8L1A6NGE4 600 aa8.76□□□□□ -1.01
TMEM116-212ENST00000550800 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
TMEM116-212ENST00000550800 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
TMEM116-212ENST00000550800 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
TMEM116-212ENST00000550800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.62□□□□□ -1.03
TMEM116-212ENST00000550800 SLC4A2P04920 1241 aa8.59□□□□□ -1.03
TMEM116-212ENST00000550800 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
TMEM116-212ENST00000550800 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-212ENST00000550800 ZBTB22O15209 634 aa8.55□□□□□ -1.04
TMEM116-212ENST00000550800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-212ENST00000550800 CACNB1Q02641 598 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-212ENST00000550800 APLP2Q06481 763 aa8.52□□□□□ -1.05
TMEM116-212ENST00000550800 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
TMEM116-212ENST00000550800 SAMD1Q6SPF0 538 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-212ENST00000550800 U3KPZ7 1027 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-212ENST00000550800 ATXN8OSP0DMR3 200 aa8.43□□□□□ -1.06
TMEM116-212ENST00000550800 RNF39Q9H2S5 420 aa8.41□□□□□ -1.06
TMEM116-212ENST00000550800 DAXXQ9UER7 740 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-212ENST00000550800 C1QBPQ07021 282 aaKnown RBP8.38□□□□□ -1.07
TMEM116-212ENST00000550800 HRCP23327 699 aa8.36□□□□□ -1.07
TMEM116-212ENST00000550800 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-212ENST00000550800 ZNF219Q9P2Y4 722 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-212ENST00000550800 CENPBP07199 599 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-212ENST00000550800 CAPN15O75808 1086 aa8.18□□□□□ -1.1
TMEM116-212ENST00000550800 ATF5Q9Y2D1 282 aaPredicted RBP8.14□□□□□ -1.11
TMEM116-212ENST00000550800 TRHP20396 242 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-212ENST00000550800 SPINK5Q9NQ38 1064 aaPredicted RBP8.13□□□□□ -1.11
TMEM116-212ENST00000550800 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
TMEM116-212ENST00000550800 ZEB1P37275 1124 aaPredicted RBP8.08□□□□□ -1.12
TMEM116-212ENST00000550800 POTEHQ6S545 545 aa8.08□□□□□ -1.12
TMEM116-212ENST00000550800 ZBTB12Q9Y330 459 aaPredicted RBP8.05□□□□□ -1.12
TMEM116-212ENST00000550800 CLSPNQ9HAW4 1339 aa8.01□□□□□ -1.13
TMEM116-212ENST00000550800 DSG3P32926 999 aa8□□□□□ -1.13
TMEM116-212ENST00000550800 POLA2Q14181 598 aa8□□□□□ -1.13
TMEM116-212ENST00000550800 FBLN2P98095 1184 aa7.99□□□□□ -1.13
TMEM116-212ENST00000550800 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
TMEM116-212ENST00000550800 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
TMEM116-212ENST00000550800 ABCB7O75027 752 aa7.97□□□□□ -1.13
TMEM116-212ENST00000550800 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
TMEM116-212ENST00000550800 CCDC180Q9P1Z9 1646 aa7.87□□□□□ -1.15
TMEM116-212ENST00000550800 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
TMEM116-212ENST00000550800 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
TMEM116-212ENST00000550800 ARXQ96QS3 562 aa7.84□□□□□ -1.15
TMEM116-212ENST00000550800 MKRN4PQ13434 485 aaPredicted RBP7.83□□□□□ -1.16
TMEM116-212ENST00000550800 FAM9AQ8IZU1 332 aaPredicted RBP7.83□□□□□ -1.16
TMEM116-212ENST00000550800 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
TMEM116-212ENST00000550800 DCAF1Q9Y4B6 1507 aa7.82□□□□□ -1.16
TMEM116-212ENST00000550800 UBE2Q2Q8WVN8 375 aa7.81□□□□□ -1.16
TMEM116-212ENST00000550800 FKBP8Q14318 412 aa7.8□□□□□ -1.16
TMEM116-212ENST00000550800 SPDYE2BA6NHP3 402 aa7.77□□□□□ -1.17
TMEM116-212ENST00000550800 SPDYE4A6NLX3 237 aa7.77□□□□□ -1.17
TMEM116-212ENST00000550800 SPDYE6P0CI01 402 aa7.77□□□□□ -1.17
TMEM116-212ENST00000550800 SPDYE2Q495Y8 402 aa7.77□□□□□ -1.17
TMEM116-212ENST00000550800 RBM42Q9BTD8 480 aaKnown RBP7.77□□□□□ -1.17
TMEM116-212ENST00000550800 NISCHQ9Y2I1 1504 aa7.76□□□□□ -1.17
TMEM116-212ENST00000550800 OSCARQ8IYS5 282 aa7.74□□□□□ -1.17
TMEM116-212ENST00000550800 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
TMEM116-212ENST00000550800 SSUH2Q9Y2M2 353 aa7.68□□□□□ -1.18
TMEM116-212ENST00000550800 PROM2Q8N271 834 aa7.66□□□□□ -1.18
TMEM116-212ENST00000550800 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
TMEM116-212ENST00000550800 NEFLP07196 543 aa7.64□□□□□ -1.19
TMEM116-212ENST00000550800 FBXO3Q9UK99 471 aa7.64□□□□□ -1.19
TMEM116-212ENST00000550800 AKT1S1Q96B36 256 aa7.63□□□□□ -1.19
TMEM116-212ENST00000550800 GLIPR1L2Q4G1C9 344 aa7.61□□□□□ -1.19
TMEM116-212ENST00000550800 STAG3Q9UJ98 1225 aa7.58□□□□□ -1.2
TMEM116-212ENST00000550800 ABCC9O60706 1549 aa7.57□□□□□ -1.2
TMEM116-212ENST00000550800 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
TMEM116-212ENST00000550800 PABPN1Q86U42 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
TMEM116-212ENST00000550800 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
TMEM116-212ENST00000550800 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
TMEM116-212ENST00000550800 NEUROD1Q13562 356 aa7.54□□□□□ -1.2
TMEM116-212ENST00000550800 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
TMEM116-212ENST00000550800 PPARGC1BQ86YN6 1023 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms