RNA–Protein interactions for RNA: ENST00000462877.5

TMCO3-204, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-204ENST00000462877 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
TMCO3-204ENST00000462877 ABCC9O60706 1549 aa19.19■□□□□ 0.66
TMCO3-204ENST00000462877 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
TMCO3-204ENST00000462877 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
TMCO3-204ENST00000462877 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
TMCO3-204ENST00000462877 NACADO15069 1562 aa17.85■□□□□ 0.45
TMCO3-204ENST00000462877 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
TMCO3-204ENST00000462877 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMCO3-204ENST00000462877 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
TMCO3-204ENST00000462877 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
TMCO3-204ENST00000462877 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
TMCO3-204ENST00000462877 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.37
TMCO3-204ENST00000462877 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
TMCO3-204ENST00000462877 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
TMCO3-204ENST00000462877 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
TMCO3-204ENST00000462877 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
TMCO3-204ENST00000462877 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
TMCO3-204ENST00000462877 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
TMCO3-204ENST00000462877 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
TMCO3-204ENST00000462877 CUX2O14529 1486 aa16.59■□□□□ 0.25
TMCO3-204ENST00000462877 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
TMCO3-204ENST00000462877 NESP48681 1621 aa16.46■□□□□ 0.23
TMCO3-204ENST00000462877 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
TMCO3-204ENST00000462877 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
TMCO3-204ENST00000462877 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
TMCO3-204ENST00000462877 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
TMCO3-204ENST00000462877 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
TMCO3-204ENST00000462877 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
TMCO3-204ENST00000462877 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
TMCO3-204ENST00000462877 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.18
TMCO3-204ENST00000462877 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
TMCO3-204ENST00000462877 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
TMCO3-204ENST00000462877 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
TMCO3-204ENST00000462877 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
TMCO3-204ENST00000462877 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
TMCO3-204ENST00000462877 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
TMCO3-204ENST00000462877 WDR62O43379 1518 aa15.99■□□□□ 0.15
TMCO3-204ENST00000462877 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
TMCO3-204ENST00000462877 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
TMCO3-204ENST00000462877 WIZO95785 1651 aa15.93■□□□□ 0.14
TMCO3-204ENST00000462877 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
TMCO3-204ENST00000462877 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
TMCO3-204ENST00000462877 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
TMCO3-204ENST00000462877 CFTRP13569 1480 aa15.76■□□□□ 0.11
TMCO3-204ENST00000462877 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
TMCO3-204ENST00000462877 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
TMCO3-204ENST00000462877 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
TMCO3-204ENST00000462877 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
TMCO3-204ENST00000462877 ZNF608Q9ULD9 1512 aaPredicted RBP15.65■□□□□ 0.1
TMCO3-204ENST00000462877 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
TMCO3-204ENST00000462877 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
TMCO3-204ENST00000462877 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
TMCO3-204ENST00000462877 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
TMCO3-204ENST00000462877 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
TMCO3-204ENST00000462877 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
TMCO3-204ENST00000462877 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
TMCO3-204ENST00000462877 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
TMCO3-204ENST00000462877 CHD1O14646 1710 aa15.48■□□□□ 0.07
TMCO3-204ENST00000462877 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
TMCO3-204ENST00000462877 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
TMCO3-204ENST00000462877 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
TMCO3-204ENST00000462877 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
TMCO3-204ENST00000462877 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
TMCO3-204ENST00000462877 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
TMCO3-204ENST00000462877 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
TMCO3-204ENST00000462877 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
TMCO3-204ENST00000462877 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
TMCO3-204ENST00000462877 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
TMCO3-204ENST00000462877 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
TMCO3-204ENST00000462877 FBLN2P98095 1184 aa15.24■□□□□ 0.03
TMCO3-204ENST00000462877 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
TMCO3-204ENST00000462877 SOGA1O94964 1423 aa15.19■□□□□ 0.02
TMCO3-204ENST00000462877 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
TMCO3-204ENST00000462877 CUX1P39880 1505 aa15.17■□□□□ 0.02
TMCO3-204ENST00000462877 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
TMCO3-204ENST00000462877 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
TMCO3-204ENST00000462877 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
TMCO3-204ENST00000462877 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
TMCO3-204ENST00000462877 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
TMCO3-204ENST00000462877 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
TMCO3-204ENST00000462877 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
TMCO3-204ENST00000462877 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
TMCO3-204ENST00000462877 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
TMCO3-204ENST00000462877 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
TMCO3-204ENST00000462877 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
TMCO3-204ENST00000462877 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
TMCO3-204ENST00000462877 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
TMCO3-204ENST00000462877 KIF13AQ9H1H9 1805 aa14.96□□□□□ -0.01
TMCO3-204ENST00000462877 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
TMCO3-204ENST00000462877 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
TMCO3-204ENST00000462877 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
TMCO3-204ENST00000462877 NUP160Q12769 1436 aa14.92□□□□□ -0.02
TMCO3-204ENST00000462877 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
TMCO3-204ENST00000462877 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
TMCO3-204ENST00000462877 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
TMCO3-204ENST00000462877 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.04
TMCO3-204ENST00000462877 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
TMCO3-204ENST00000462877 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
TMCO3-204ENST00000462877 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
TMCO3-204ENST00000462877 ADCY10Q96PN6 1610 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms