RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
SLC13A3-202ENST00000290317 DCAF8L2P0C7V8 631 aa14.22□□□□□ -0.13
SLC13A3-202ENST00000290317 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
SLC13A3-202ENST00000290317 ABCC9O60706 1549 aa13.72□□□□□ -0.21
SLC13A3-202ENST00000290317 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.22
SLC13A3-202ENST00000290317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
SLC13A3-202ENST00000290317 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
SLC13A3-202ENST00000290317 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-202ENST00000290317 NACADO15069 1562 aa13.34□□□□□ -0.27
SLC13A3-202ENST00000290317 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
SLC13A3-202ENST00000290317 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
SLC13A3-202ENST00000290317 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
SLC13A3-202ENST00000290317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.31
SLC13A3-202ENST00000290317 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
SLC13A3-202ENST00000290317 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
SLC13A3-202ENST00000290317 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
SLC13A3-202ENST00000290317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.71□□□□□ -0.37
SLC13A3-202ENST00000290317 MYT1Q01538 1121 aa12.66□□□□□ -0.38
SLC13A3-202ENST00000290317 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
SLC13A3-202ENST00000290317 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
SLC13A3-202ENST00000290317 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
SLC13A3-202ENST00000290317 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
SLC13A3-202ENST00000290317 CHIC1Q5VXU3 224 aa12.54□□□□□ -0.4
SLC13A3-202ENST00000290317 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
SLC13A3-202ENST00000290317 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
SLC13A3-202ENST00000290317 WIZO95785 1651 aa12.48□□□□□ -0.41
SLC13A3-202ENST00000290317 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
SLC13A3-202ENST00000290317 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
SLC13A3-202ENST00000290317 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
SLC13A3-202ENST00000290317 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
SLC13A3-202ENST00000290317 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
SLC13A3-202ENST00000290317 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
SLC13A3-202ENST00000290317 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
SLC13A3-202ENST00000290317 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.45
SLC13A3-202ENST00000290317 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
SLC13A3-202ENST00000290317 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
SLC13A3-202ENST00000290317 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
SLC13A3-202ENST00000290317 HRCP23327 699 aa12.16□□□□□ -0.46
SLC13A3-202ENST00000290317 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
SLC13A3-202ENST00000290317 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
SLC13A3-202ENST00000290317 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
SLC13A3-202ENST00000290317 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
SLC13A3-202ENST00000290317 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
SLC13A3-202ENST00000290317 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
SLC13A3-202ENST00000290317 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
SLC13A3-202ENST00000290317 PDS5BQ9NTI5 1447 aa12.04□□□□□ -0.48
SLC13A3-202ENST00000290317 CFTRP13569 1480 aa12.04□□□□□ -0.48
SLC13A3-202ENST00000290317 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.48
SLC13A3-202ENST00000290317 EEA1Q15075 1411 aa12□□□□□ -0.49
SLC13A3-202ENST00000290317 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
SLC13A3-202ENST00000290317 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
SLC13A3-202ENST00000290317 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
SLC13A3-202ENST00000290317 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
SLC13A3-202ENST00000290317 APLP2Q06481 763 aa11.94□□□□□ -0.5
SLC13A3-202ENST00000290317 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
SLC13A3-202ENST00000290317 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
SLC13A3-202ENST00000290317 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
SLC13A3-202ENST00000290317 SOGA1O94964 1423 aa11.9□□□□□ -0.5
SLC13A3-202ENST00000290317 NESP48681 1621 aa11.9□□□□□ -0.5
SLC13A3-202ENST00000290317 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
SLC13A3-202ENST00000290317 CUX2O14529 1486 aa11.84□□□□□ -0.51
SLC13A3-202ENST00000290317 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
SLC13A3-202ENST00000290317 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
SLC13A3-202ENST00000290317 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
SLC13A3-202ENST00000290317 CUX1P39880 1505 aa11.8□□□□□ -0.52
SLC13A3-202ENST00000290317 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
SLC13A3-202ENST00000290317 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
SLC13A3-202ENST00000290317 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
SLC13A3-202ENST00000290317 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
SLC13A3-202ENST00000290317 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
SLC13A3-202ENST00000290317 FBLN2P98095 1184 aa11.75□□□□□ -0.53
SLC13A3-202ENST00000290317 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
SLC13A3-202ENST00000290317 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
SLC13A3-202ENST00000290317 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
SLC13A3-202ENST00000290317 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
SLC13A3-202ENST00000290317 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
SLC13A3-202ENST00000290317 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
SLC13A3-202ENST00000290317 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
SLC13A3-202ENST00000290317 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SLC13A3-202ENST00000290317 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
SLC13A3-202ENST00000290317 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
SLC13A3-202ENST00000290317 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
SLC13A3-202ENST00000290317 IGF1RP08069 1367 aa11.69□□□□□ -0.54
SLC13A3-202ENST00000290317 CLIP1P30622 1438 aa11.68□□□□□ -0.54
SLC13A3-202ENST00000290317 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
SLC13A3-202ENST00000290317 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
SLC13A3-202ENST00000290317 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
SLC13A3-202ENST00000290317 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
SLC13A3-202ENST00000290317 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
SLC13A3-202ENST00000290317 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
SLC13A3-202ENST00000290317 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
SLC13A3-202ENST00000290317 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
SLC13A3-202ENST00000290317 KIF21BO75037 1637 aa11.6□□□□□ -0.55
SLC13A3-202ENST00000290317 PRXQ9BXM0 1461 aa11.6□□□□□ -0.55
SLC13A3-202ENST00000290317 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
SLC13A3-202ENST00000290317 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
SLC13A3-202ENST00000290317 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
SLC13A3-202ENST00000290317 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
SLC13A3-202ENST00000290317 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
SLC13A3-202ENST00000290317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms