RNA–Protein interactions for RNA: ENST00000594521.5

ARHGEF1-210, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-210ENST00000594521 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.52
ARHGEF1-210ENST00000594521 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
ARHGEF1-210ENST00000594521 ABCC9O60706 1549 aa38.87■■■■□ 3.81
ARHGEF1-210ENST00000594521 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
ARHGEF1-210ENST00000594521 NACADO15069 1562 aa36.83■■■■□ 3.49
ARHGEF1-210ENST00000594521 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
ARHGEF1-210ENST00000594521 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
ARHGEF1-210ENST00000594521 DNAJC5BQ9UF47 199 aa36.35■■■■□ 3.41
ARHGEF1-210ENST00000594521 MYO15BQ96JP2 1530 aa36.33■■■■□ 3.41
ARHGEF1-210ENST00000594521 PABPN1Q86U42 306 aaKnown RBP eCLIP36.07■■■■□ 3.369e-7■■■■□ 25.9
ARHGEF1-210ENST00000594521 BICRAQ9NZM4 1560 aa35.99■■■■□ 3.35
ARHGEF1-210ENST00000594521 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
ARHGEF1-210ENST00000594521 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
ARHGEF1-210ENST00000594521 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
ARHGEF1-210ENST00000594521 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
ARHGEF1-210ENST00000594521 CC2D2AQ9P2K1 1620 aa35.2■■■■□ 3.23
ARHGEF1-210ENST00000594521 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
ARHGEF1-210ENST00000594521 CECR2Q9BXF3 1484 aa35.04■■■■□ 3.2
ARHGEF1-210ENST00000594521 NCAPD3P42695 1498 aa33.93■■■■□ 3.02
ARHGEF1-210ENST00000594521 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
ARHGEF1-210ENST00000594521 ATAD2BQ9ULI0 1458 aa33.81■■■■□ 3
ARHGEF1-210ENST00000594521 SMARCA2P51531 1590 aa33.81■■■■□ 3
ARHGEF1-210ENST00000594521 HMGXB3Q12766 1538 aa33.77■■■■□ 3
ARHGEF1-210ENST00000594521 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
ARHGEF1-210ENST00000594521 ERCC6Q03468 1493 aa33.61■■■□□ 2.97
ARHGEF1-210ENST00000594521 CUX2O14529 1486 aa33.6■■■□□ 2.97
ARHGEF1-210ENST00000594521 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
ARHGEF1-210ENST00000594521 BAZ1BQ9UIG0 1483 aaKnown RBP33.52■■■□□ 2.96
ARHGEF1-210ENST00000594521 DNAJC5Q9H3Z4 198 aa33.47■■■□□ 2.95
ARHGEF1-210ENST00000594521 NESP48681 1621 aa33.39■■■□□ 2.93
ARHGEF1-210ENST00000594521 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
ARHGEF1-210ENST00000594521 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
ARHGEF1-210ENST00000594521 THOC2Q8NI27 1593 aaKnown RBP33.18■■■□□ 2.9
ARHGEF1-210ENST00000594521 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
ARHGEF1-210ENST00000594521 WIZO95785 1651 aa33.01■■■□□ 2.88
ARHGEF1-210ENST00000594521 PDS5BQ9NTI5 1447 aa32.98■■■□□ 2.87
ARHGEF1-210ENST00000594521 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
ARHGEF1-210ENST00000594521 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
ARHGEF1-210ENST00000594521 WDR62O43379 1518 aa32.69■■■□□ 2.82
ARHGEF1-210ENST00000594521 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
ARHGEF1-210ENST00000594521 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
ARHGEF1-210ENST00000594521 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
ARHGEF1-210ENST00000594521 CFTRP13569 1480 aa32.53■■■□□ 2.8
ARHGEF1-210ENST00000594521 FANCD2Q9BXW9 1451 aa32.53■■■□□ 2.8
ARHGEF1-210ENST00000594521 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
ARHGEF1-210ENST00000594521 URB2Q14146 1524 aaKnown RBP32.26■■■□□ 2.75
ARHGEF1-210ENST00000594521 CCDC88BA6NC98 1476 aa32.14■■■□□ 2.74
ARHGEF1-210ENST00000594521 TRIM41Q8WV44 630 aa31.97■■■□□ 2.71
ARHGEF1-210ENST00000594521 IFT140Q96RY7 1462 aa31.93■■■□□ 2.7
ARHGEF1-210ENST00000594521 OSCARQ8IYS5 282 aa31.93■■■□□ 2.7
ARHGEF1-210ENST00000594521 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
ARHGEF1-210ENST00000594521 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
ARHGEF1-210ENST00000594521 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
ARHGEF1-210ENST00000594521 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
ARHGEF1-210ENST00000594521 EIF4G3O43432 1585 aaKnown RBP31.79■■■□□ 2.68
ARHGEF1-210ENST00000594521 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
ARHGEF1-210ENST00000594521 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
ARHGEF1-210ENST00000594521 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
ARHGEF1-210ENST00000594521 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
ARHGEF1-210ENST00000594521 CHD1O14646 1710 aa31.61■■■□□ 2.65
ARHGEF1-210ENST00000594521 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
ARHGEF1-210ENST00000594521 ARHGEF11O15085 1522 aa31.53■■■□□ 2.64
ARHGEF1-210ENST00000594521 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.644e-6■■■■■ 27.8
ARHGEF1-210ENST00000594521 WDR97A6NE52 1622 aa31.46■■■□□ 2.63
ARHGEF1-210ENST00000594521 RAD54L2Q9Y4B4 1467 aa31.41■■■□□ 2.62
ARHGEF1-210ENST00000594521 SOGA1O94964 1423 aa31.39■■■□□ 2.62
ARHGEF1-210ENST00000594521 FGD5Q6ZNL6 1462 aa31.39■■■□□ 2.62
ARHGEF1-210ENST00000594521 CUX1P39880 1505 aa31.35■■■□□ 2.61
ARHGEF1-210ENST00000594521 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
ARHGEF1-210ENST00000594521 FBLN2P98095 1184 aa31.27■■■□□ 2.6
ARHGEF1-210ENST00000594521 SNAPC4Q5SXM2 1469 aa31.26■■■□□ 2.59
ARHGEF1-210ENST00000594521 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
ARHGEF1-210ENST00000594521 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
ARHGEF1-210ENST00000594521 ARAP1Q96P48 1450 aa31.19■■■□□ 2.58
ARHGEF1-210ENST00000594521 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
ARHGEF1-210ENST00000594521 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
ARHGEF1-210ENST00000594521 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
ARHGEF1-210ENST00000594521 CYB5RLQ6IPT4 315 aa31.15■■■□□ 2.58
ARHGEF1-210ENST00000594521 SYNJ2O15056 1496 aa31.1■■■□□ 2.57
ARHGEF1-210ENST00000594521 ABCA5Q8WWZ7 1642 aa31.07■■■□□ 2.56
ARHGEF1-210ENST00000594521 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
ARHGEF1-210ENST00000594521 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
ARHGEF1-210ENST00000594521 ABCA10Q8WWZ4 1543 aa31.04■■■□□ 2.56
ARHGEF1-210ENST00000594521 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
ARHGEF1-210ENST00000594521 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
ARHGEF1-210ENST00000594521 TOP2BQ02880 1626 aa30.91■■■□□ 2.54
ARHGEF1-210ENST00000594521 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
ARHGEF1-210ENST00000594521 TRHP20396 242 aaPredicted RBP30.84■■■□□ 2.53
ARHGEF1-210ENST00000594521 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
ARHGEF1-210ENST00000594521 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
ARHGEF1-210ENST00000594521 CEP170Q5SW79 1584 aa30.71■■■□□ 2.51
ARHGEF1-210ENST00000594521 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
ARHGEF1-210ENST00000594521 NUP160Q12769 1436 aa30.67■■■□□ 2.5
ARHGEF1-210ENST00000594521 FHAD1B1AJZ9 1412 aa30.65■■■□□ 2.5
ARHGEF1-210ENST00000594521 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
ARHGEF1-210ENST00000594521 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
ARHGEF1-210ENST00000594521 RUSC2Q8N2Y8 1516 aa30.41■■■□□ 2.46
ARHGEF1-210ENST00000594521 PRG4Q92954 1404 aaPredicted RBP30.33■■■□□ 2.45
ARHGEF1-210ENST00000594521 CUL7Q14999 1698 aa30.31■■■□□ 2.44
ARHGEF1-210ENST00000594521 KIF13AQ9H1H9 1805 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms