RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
TMEM116-217ENST00000552801 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
TMEM116-217ENST00000552801 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
TMEM116-217ENST00000552801 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
TMEM116-217ENST00000552801 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
TMEM116-217ENST00000552801 ABCC9O60706 1549 aa19.43■□□□□ 0.7
TMEM116-217ENST00000552801 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
TMEM116-217ENST00000552801 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
TMEM116-217ENST00000552801 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
TMEM116-217ENST00000552801 NACADO15069 1562 aa18.33■□□□□ 0.53
TMEM116-217ENST00000552801 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
TMEM116-217ENST00000552801 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
TMEM116-217ENST00000552801 FOXD1Q16676 465 aa18.04■□□□□ 0.48
TMEM116-217ENST00000552801 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
TMEM116-217ENST00000552801 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
TMEM116-217ENST00000552801 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
TMEM116-217ENST00000552801 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
TMEM116-217ENST00000552801 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
TMEM116-217ENST00000552801 DCAF1Q9Y4B6 1507 aa17.75■□□□□ 0.43
TMEM116-217ENST00000552801 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
TMEM116-217ENST00000552801 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
TMEM116-217ENST00000552801 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
TMEM116-217ENST00000552801 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
TMEM116-217ENST00000552801 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
TMEM116-217ENST00000552801 ADRA2BP18089 450 aa17.28■□□□□ 0.36
TMEM116-217ENST00000552801 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.35
TMEM116-217ENST00000552801 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
TMEM116-217ENST00000552801 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
TMEM116-217ENST00000552801 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
TMEM116-217ENST00000552801 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
TMEM116-217ENST00000552801 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
TMEM116-217ENST00000552801 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
TMEM116-217ENST00000552801 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
TMEM116-217ENST00000552801 HMGXB3Q12766 1538 aa16.77■□□□□ 0.27
TMEM116-217ENST00000552801 CUX2O14529 1486 aa16.76■□□□□ 0.27
TMEM116-217ENST00000552801 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
TMEM116-217ENST00000552801 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
TMEM116-217ENST00000552801 MSH5O43196 834 aa16.72■□□□□ 0.27
TMEM116-217ENST00000552801 NESP48681 1621 aa16.62■□□□□ 0.25
TMEM116-217ENST00000552801 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
TMEM116-217ENST00000552801 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
TMEM116-217ENST00000552801 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
TMEM116-217ENST00000552801 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
TMEM116-217ENST00000552801 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
TMEM116-217ENST00000552801 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
TMEM116-217ENST00000552801 WIZO95785 1651 aa16.4■□□□□ 0.22
TMEM116-217ENST00000552801 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
TMEM116-217ENST00000552801 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
TMEM116-217ENST00000552801 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
TMEM116-217ENST00000552801 WDR62O43379 1518 aa16.24■□□□□ 0.19
TMEM116-217ENST00000552801 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
TMEM116-217ENST00000552801 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
TMEM116-217ENST00000552801 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
TMEM116-217ENST00000552801 CFTRP13569 1480 aa16.17■□□□□ 0.18
TMEM116-217ENST00000552801 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
TMEM116-217ENST00000552801 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
TMEM116-217ENST00000552801 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
TMEM116-217ENST00000552801 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
TMEM116-217ENST00000552801 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
TMEM116-217ENST00000552801 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
TMEM116-217ENST00000552801 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
TMEM116-217ENST00000552801 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
TMEM116-217ENST00000552801 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
TMEM116-217ENST00000552801 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
TMEM116-217ENST00000552801 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
TMEM116-217ENST00000552801 DNMBPQ6XZF7 1577 aa15.85■□□□□ 0.13
TMEM116-217ENST00000552801 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
TMEM116-217ENST00000552801 FBLN2P98095 1184 aa15.78■□□□□ 0.12
TMEM116-217ENST00000552801 RIMBP3CA6NJZ7 1639 aa15.78■□□□□ 0.12
TMEM116-217ENST00000552801 RIMBP3BA6NNM3 1639 aa15.78■□□□□ 0.12
TMEM116-217ENST00000552801 RIMBP3Q9UFD9 1639 aa15.78■□□□□ 0.12
TMEM116-217ENST00000552801 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.118e-7■■■■■ 28.7
TMEM116-217ENST00000552801 CHD1O14646 1710 aa15.72■□□□□ 0.11
TMEM116-217ENST00000552801 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
TMEM116-217ENST00000552801 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
TMEM116-217ENST00000552801 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
TMEM116-217ENST00000552801 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
TMEM116-217ENST00000552801 SOGA1O94964 1423 aa15.69■□□□□ 0.1
TMEM116-217ENST00000552801 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
TMEM116-217ENST00000552801 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
TMEM116-217ENST00000552801 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
TMEM116-217ENST00000552801 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
TMEM116-217ENST00000552801 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
TMEM116-217ENST00000552801 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
TMEM116-217ENST00000552801 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
TMEM116-217ENST00000552801 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
TMEM116-217ENST00000552801 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
TMEM116-217ENST00000552801 CUX1P39880 1505 aa15.58■□□□□ 0.08
TMEM116-217ENST00000552801 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
TMEM116-217ENST00000552801 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
TMEM116-217ENST00000552801 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
TMEM116-217ENST00000552801 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
TMEM116-217ENST00000552801 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
TMEM116-217ENST00000552801 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
TMEM116-217ENST00000552801 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
TMEM116-217ENST00000552801 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
TMEM116-217ENST00000552801 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
TMEM116-217ENST00000552801 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
TMEM116-217ENST00000552801 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
TMEM116-217ENST00000552801 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms