Protein–RNA interactions for Protein: P09651

HNRNPA1, Heterogeneous nuclear ribonucleoprotein A1, humanhuman

Known RBP eCLIP

Length 372 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P09651 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.237e-10■■■□□ 19.1
HNRNPA1P09651 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.317e-10■■■□□ 19.1
HNRNPA1P09651 SREBF1-209ENST00000470247 374 ntTSL 511.81□□□□□ -0.527e-10■■■□□ 19.1
HNRNPA1P09651 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.471e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.69■■□□□ 1.77e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-204ENST00000399237 822 ntTSL 523.21■■□□□ 1.317e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)22.41■■□□□ 1.187e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.517e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-204ENST00000418304 1759 ntTSL 518.03■□□□□ 0.487e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.267e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-208ENST00000466653 2315 ntTSL 216.68■□□□□ 0.267e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.81■□□□□ 0.127e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.027e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.84□□□□□ -0.037e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.127e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-202ENST00000420267 590 ntTSL 413.7□□□□□ -0.227e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.337e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.15□□□□□ -0.467e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.67e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)10.72□□□□□ -0.697e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.97□□□□□ -0.977e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-202ENST00000520048 904 ntTSL 38.94□□□□□ -0.987e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)7.18□□□□□ -1.267e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.6□□□□□ -1.357e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.633e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.633e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC10.48□□□□□ -0.733e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.2□□□□□ -0.943e-6■■■□□ 18.1
HNRNPA1P09651 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.398e-9■■■□□ 17.9
HNRNPA1P09651 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)18.44■□□□□ 0.548e-9■■■□□ 17.9
HNRNPA1P09651 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.448e-9■■■□□ 17.9
HNRNPA1P09651 YARS-207ENST00000481895 1018 ntTSL 521.77■■□□□ 1.087e-6■■■□□ 17.7
HNRNPA1P09651 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.017e-6■■■□□ 17.7
HNRNPA1P09651 YARS-202ENST00000466052 728 ntTSL 310.91□□□□□ -0.667e-6■■■□□ 17.7
HNRNPA1P09651 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.91□□□□□ -0.827e-6■■■□□ 17.7
HNRNPA1P09651 YARS-204ENST00000470377 782 ntTSL 38.57□□□□□ -1.047e-6■■■□□ 17.7
HNRNPA1P09651 HNRNPA2B1-203ENST00000360787 1724 ntTSL 514.49□□□□□ -0.095e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.19□□□□□ -0.35e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.33□□□□□ -0.765e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.195e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-205ENST00000476233 1220 ntTSL 1 (best)6.26□□□□□ -1.415e-6■■■□□ 17.6
HNRNPA1P09651 HP1BP3-210ENST00000438032 1159 ntTSL 522.5■■□□□ 1.191e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.53■■□□□ 1.041e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-208ENST00000424732 970 ntTSL 319.89■□□□□ 0.771e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-205ENST00000417710 572 ntTSL 510.36□□□□□ -0.751e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.261e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-212ENST00000487117 1598 ntTSL 26.17□□□□□ -1.421e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-207ENST00000419948 759 ntTSL 55.44□□□□□ -1.541e-10■■■□□ 17.5
HNRNPA1P09651 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)20.35■□□□□ 0.851e-8■■■□□ 17.1
HNRNPA1P09651 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.81e-8■■■□□ 17.1
HNRNPA1P09651 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.01■□□□□ 0.631e-8■■■□□ 17.1
HNRNPA1P09651 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.037e-6■■■□□ 17
HNRNPA1P09651 NRIP1-207ENST00000638122 543 ntTSL 1 (best)13.04□□□□□ -0.327e-6■■■□□ 17
HNRNPA1P09651 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.797e-6■■■□□ 17
HNRNPA1P09651 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.73□□□□□ -1.497e-6■■■□□ 17
HNRNPA1P09651 NRIP1-204ENST00000411932 720 ntTSL 35.23□□□□□ -1.577e-6■■■□□ 17
HNRNPA1P09651 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.677e-6■■■□□ 17
HNRNPA1P09651 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC12.09□□□□□ -0.476e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC11.77□□□□□ -0.536e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC10.98□□□□□ -0.656e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-206ENST00000514844 667 ntTSL 1 (best)5.51□□□□□ -1.536e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-201ENST00000503107 458 ntTSL 1 (best)4.66□□□□□ -1.666e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.32□□□□□ -1.726e-6■■■□□ 16.8
HNRNPA1P09651 DDX17-205ENST00000432525 1354 ntTSL 211.45□□□□□ -0.589e-9■■■□□ 16.6
HNRNPA1P09651 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.78e-15■■■□□ 16.4
HNRNPA1P09651 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.058e-7■■■□□ 16.3
HNRNPA1P09651 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.168e-7■■■□□ 16.3
HNRNPA1P09651 HNMT-206ENST00000475675 743 ntTSL 39.09□□□□□ -0.957e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-207ENST00000480534 339 ntTSL 36.83□□□□□ -1.327e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.63□□□□□ -1.357e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-205ENST00000467390 532 ntTSL 26.06□□□□□ -1.447e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.557e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.657e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-208ENST00000485653 675 ntTSL 53.13□□□□□ -1.917e-6■■■□□ 16.3
HNRNPA1P09651 CCNY-209ENST00000493157 816 ntTSL 518.54■□□□□ 0.564e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-207ENST00000490012 793 ntTSL 317.18■□□□□ 0.344e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.45■□□□□ 0.064e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.434e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.784e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-208ENST00000492478 809 ntTSL 59.4□□□□□ -0.94e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-206ENST00000470025 346 ntTSL 54.39□□□□□ -1.714e-8■■■□□ 16.1
HNRNPA1P09651 CASC19-272ENST00000641991 1360 nt11.86□□□□□ -0.511e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-229ENST00000641418 1373 ntBASIC11.49□□□□□ -0.571e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-247ENST00000641642 1107 nt10.88□□□□□ -0.671e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-230ENST00000641421 1530 ntBASIC10.59□□□□□ -0.711e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-235ENST00000641496 1154 nt10.43□□□□□ -0.741e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-263ENST00000641880 1404 nt9.6□□□□□ -0.871e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-273ENST00000642010 925 nt9.4□□□□□ -0.91e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-254ENST00000641719 1443 nt9.05□□□□□ -0.961e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-214ENST00000641171 1493 nt8.78□□□□□ -11e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-252ENST00000641704 1313 nt8.49□□□□□ -1.051e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-216ENST00000641179 1140 nt8.39□□□□□ -1.071e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-266ENST00000641934 1050 nt8.29□□□□□ -1.081e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-218ENST00000641218 1522 nt8.03□□□□□ -1.121e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-240ENST00000641578 1061 nt7.93□□□□□ -1.141e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-257ENST00000641786 816 nt7.87□□□□□ -1.151e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-211ENST00000641106 1184 nt7.8□□□□□ -1.161e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-250ENST00000641696 886 nt7.78□□□□□ -1.161e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-244ENST00000641604 1251 nt7.64□□□□□ -1.191e-5■■■□□ 15.8
Retrieved 100 of 921 protein–RNA pairs in 42.3 ms