Protein–RNA interactions for Protein: P09651

HNRNPA1, Heterogeneous nuclear ribonucleoprotein A1, humanhuman

Known RBP eCLIP

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P09651 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.237e-10■■■□□ 19.1
HNRNPA1P09651 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.317e-10■■■□□ 19.1
HNRNPA1P09651 SREBF1-209ENST00000470247 374 ntTSL 511.81□□□□□ -0.527e-10■■■□□ 19.1
HNRNPA1P09651 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.471e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.69■■□□□ 1.77e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-204ENST00000399237 822 ntTSL 523.21■■□□□ 1.317e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)22.41■■□□□ 1.187e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.517e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-204ENST00000418304 1759 ntTSL 518.03■□□□□ 0.487e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.267e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-208ENST00000466653 2315 ntTSL 216.68■□□□□ 0.267e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.81■□□□□ 0.127e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.027e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.84□□□□□ -0.037e-6■■■□□ 18.1
HNRNPA1P09651 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.127e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-202ENST00000420267 590 ntTSL 413.7□□□□□ -0.227e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.337e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.15□□□□□ -0.467e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.67e-6■■■□□ 18.1
HNRNPA1P09651 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)10.72□□□□□ -0.697e-6■■■□□ 18.1
HNRNPA1P09651 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC8.97□□□□□ -0.977e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-202ENST00000520048 904 ntTSL 38.94□□□□□ -0.987e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)7.18□□□□□ -1.267e-6■■■□□ 18.1
HNRNPA1P09651 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.6□□□□□ -1.357e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.633e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.633e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC10.48□□□□□ -0.733e-6■■■□□ 18.1
HNRNPA1P09651 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC9.2□□□□□ -0.943e-6■■■□□ 18.1
HNRNPA1P09651 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.398e-9■■■□□ 17.9
HNRNPA1P09651 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)18.44■□□□□ 0.548e-9■■■□□ 17.9
HNRNPA1P09651 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.448e-9■■■□□ 17.9
HNRNPA1P09651 YARS-207ENST00000481895 1018 ntTSL 521.77■■□□□ 1.087e-6■■■□□ 17.7
HNRNPA1P09651 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.017e-6■■■□□ 17.7
HNRNPA1P09651 YARS-202ENST00000466052 728 ntTSL 310.91□□□□□ -0.667e-6■■■□□ 17.7
HNRNPA1P09651 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.91□□□□□ -0.827e-6■■■□□ 17.7
HNRNPA1P09651 YARS-204ENST00000470377 782 ntTSL 38.57□□□□□ -1.047e-6■■■□□ 17.7
HNRNPA1P09651 HNRNPA2B1-203ENST00000360787 1724 ntTSL 514.49□□□□□ -0.095e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.19□□□□□ -0.35e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.33□□□□□ -0.765e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.195e-6■■■□□ 17.6
HNRNPA1P09651 HNRNPA2B1-205ENST00000476233 1220 ntTSL 1 (best)6.26□□□□□ -1.415e-6■■■□□ 17.6
HNRNPA1P09651 HP1BP3-210ENST00000438032 1159 ntTSL 522.5■■□□□ 1.191e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.53■■□□□ 1.041e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-208ENST00000424732 970 ntTSL 319.89■□□□□ 0.771e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-205ENST00000417710 572 ntTSL 510.36□□□□□ -0.751e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.261e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-212ENST00000487117 1598 ntTSL 26.17□□□□□ -1.421e-10■■■□□ 17.5
HNRNPA1P09651 HP1BP3-207ENST00000419948 759 ntTSL 55.44□□□□□ -1.541e-10■■■□□ 17.5
HNRNPA1P09651 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)20.35■□□□□ 0.851e-8■■■□□ 17.1
HNRNPA1P09651 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.81e-8■■■□□ 17.1
HNRNPA1P09651 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.01■□□□□ 0.631e-8■■■□□ 17.1
HNRNPA1P09651 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.037e-6■■■□□ 17
HNRNPA1P09651 NRIP1-207ENST00000638122 543 ntTSL 1 (best)13.04□□□□□ -0.327e-6■■■□□ 17
HNRNPA1P09651 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.797e-6■■■□□ 17
HNRNPA1P09651 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.73□□□□□ -1.497e-6■■■□□ 17
HNRNPA1P09651 NRIP1-204ENST00000411932 720 ntTSL 35.23□□□□□ -1.577e-6■■■□□ 17
HNRNPA1P09651 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.677e-6■■■□□ 17
HNRNPA1P09651 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC12.09□□□□□ -0.476e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC11.77□□□□□ -0.536e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC10.98□□□□□ -0.656e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-206ENST00000514844 667 ntTSL 1 (best)5.51□□□□□ -1.536e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-201ENST00000503107 458 ntTSL 1 (best)4.66□□□□□ -1.666e-6■■■□□ 16.8
HNRNPA1P09651 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.32□□□□□ -1.726e-6■■■□□ 16.8
HNRNPA1P09651 DDX17-205ENST00000432525 1354 ntTSL 211.45□□□□□ -0.589e-9■■■□□ 16.6
HNRNPA1P09651 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.78e-15■■■□□ 16.4
HNRNPA1P09651 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.058e-7■■■□□ 16.3
HNRNPA1P09651 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.168e-7■■■□□ 16.3
HNRNPA1P09651 HNMT-206ENST00000475675 743 ntTSL 39.09□□□□□ -0.957e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-207ENST00000480534 339 ntTSL 36.83□□□□□ -1.327e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.63□□□□□ -1.357e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-205ENST00000467390 532 ntTSL 26.06□□□□□ -1.447e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.557e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.657e-6■■■□□ 16.3
HNRNPA1P09651 HNMT-208ENST00000485653 675 ntTSL 53.13□□□□□ -1.917e-6■■■□□ 16.3
HNRNPA1P09651 CCNY-209ENST00000493157 816 ntTSL 518.54■□□□□ 0.564e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-207ENST00000490012 793 ntTSL 317.18■□□□□ 0.344e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.45■□□□□ 0.064e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.434e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.784e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-208ENST00000492478 809 ntTSL 59.4□□□□□ -0.94e-8■■■□□ 16.1
HNRNPA1P09651 CCNY-206ENST00000470025 346 ntTSL 54.39□□□□□ -1.714e-8■■■□□ 16.1
HNRNPA1P09651 CASC19-272ENST00000641991 1360 nt11.86□□□□□ -0.511e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-229ENST00000641418 1373 ntBASIC11.49□□□□□ -0.571e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-247ENST00000641642 1107 nt10.88□□□□□ -0.671e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-230ENST00000641421 1530 ntBASIC10.59□□□□□ -0.711e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-235ENST00000641496 1154 nt10.43□□□□□ -0.741e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-263ENST00000641880 1404 nt9.6□□□□□ -0.871e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-273ENST00000642010 925 nt9.4□□□□□ -0.91e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-254ENST00000641719 1443 nt9.05□□□□□ -0.961e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-214ENST00000641171 1493 nt8.78□□□□□ -11e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-252ENST00000641704 1313 nt8.49□□□□□ -1.051e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-216ENST00000641179 1140 nt8.39□□□□□ -1.071e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-266ENST00000641934 1050 nt8.29□□□□□ -1.081e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-218ENST00000641218 1522 nt8.03□□□□□ -1.121e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-240ENST00000641578 1061 nt7.93□□□□□ -1.141e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-257ENST00000641786 816 nt7.87□□□□□ -1.151e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-211ENST00000641106 1184 nt7.8□□□□□ -1.161e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-250ENST00000641696 886 nt7.78□□□□□ -1.161e-5■■■□□ 15.8
HNRNPA1P09651 CASC19-244ENST00000641604 1251 nt7.64□□□□□ -1.191e-5■■■□□ 15.8
Retrieved 100 of 921 protein–RNA pairs in 292.8 ms