RNA–Protein interactions for RNA: ENST00000421364.5

ARID4B-205, Transcript of AT-rich interaction domain 4B, humanhuman

TSL 1 (best)

Gene ARID4B, Length 5,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4B-205ENST00000421364 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
ARID4B-205ENST00000421364 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
ARID4B-205ENST00000421364 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
ARID4B-205ENST00000421364 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.85
ARID4B-205ENST00000421364 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
ARID4B-205ENST00000421364 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
ARID4B-205ENST00000421364 APLP2Q06481 763 aa19.53■□□□□ 0.72
ARID4B-205ENST00000421364 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
ARID4B-205ENST00000421364 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
ARID4B-205ENST00000421364 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
ARID4B-205ENST00000421364 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
ARID4B-205ENST00000421364 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
ARID4B-205ENST00000421364 ABCC9O60706 1549 aa18.83■□□□□ 0.61
ARID4B-205ENST00000421364 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
ARID4B-205ENST00000421364 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
ARID4B-205ENST00000421364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
ARID4B-205ENST00000421364 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
ARID4B-205ENST00000421364 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
ARID4B-205ENST00000421364 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
ARID4B-205ENST00000421364 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
ARID4B-205ENST00000421364 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
ARID4B-205ENST00000421364 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
ARID4B-205ENST00000421364 ITGAEP38570 1179 aa18.3■□□□□ 0.52
ARID4B-205ENST00000421364 FBLN2P98095 1184 aa18.28■□□□□ 0.52
ARID4B-205ENST00000421364 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
ARID4B-205ENST00000421364 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
ARID4B-205ENST00000421364 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
ARID4B-205ENST00000421364 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
ARID4B-205ENST00000421364 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
ARID4B-205ENST00000421364 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
ARID4B-205ENST00000421364 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
ARID4B-205ENST00000421364 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
ARID4B-205ENST00000421364 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
ARID4B-205ENST00000421364 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
ARID4B-205ENST00000421364 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
ARID4B-205ENST00000421364 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
ARID4B-205ENST00000421364 BCANQ96GW7 911 aa17.69■□□□□ 0.42
ARID4B-205ENST00000421364 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
ARID4B-205ENST00000421364 NEFLP07196 543 aa17.69■□□□□ 0.42
ARID4B-205ENST00000421364 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
ARID4B-205ENST00000421364 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
ARID4B-205ENST00000421364 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
ARID4B-205ENST00000421364 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
ARID4B-205ENST00000421364 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
ARID4B-205ENST00000421364 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
ARID4B-205ENST00000421364 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
ARID4B-205ENST00000421364 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
ARID4B-205ENST00000421364 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
ARID4B-205ENST00000421364 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
ARID4B-205ENST00000421364 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
ARID4B-205ENST00000421364 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
ARID4B-205ENST00000421364 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
ARID4B-205ENST00000421364 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.36
ARID4B-205ENST00000421364 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
ARID4B-205ENST00000421364 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
ARID4B-205ENST00000421364 HRCP23327 699 aa17.2■□□□□ 0.34
ARID4B-205ENST00000421364 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
ARID4B-205ENST00000421364 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
ARID4B-205ENST00000421364 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
ARID4B-205ENST00000421364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.345e-7■■□□□ 14
ARID4B-205ENST00000421364 NEFMP07197 916 aa17.13■□□□□ 0.33
ARID4B-205ENST00000421364 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
ARID4B-205ENST00000421364 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.33
ARID4B-205ENST00000421364 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
ARID4B-205ENST00000421364 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
ARID4B-205ENST00000421364 TSPY4P0CV99 314 aa17.06■□□□□ 0.32
ARID4B-205ENST00000421364 TSPY10P0CW01 314 aa17.06■□□□□ 0.32
ARID4B-205ENST00000421364 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
ARID4B-205ENST00000421364 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
ARID4B-205ENST00000421364 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.31
ARID4B-205ENST00000421364 NACADO15069 1562 aa17■□□□□ 0.31
ARID4B-205ENST00000421364 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
ARID4B-205ENST00000421364 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
ARID4B-205ENST00000421364 ANP32CO43423 234 aa16.96■□□□□ 0.31
ARID4B-205ENST00000421364 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.3
ARID4B-205ENST00000421364 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
ARID4B-205ENST00000421364 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
ARID4B-205ENST00000421364 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
ARID4B-205ENST00000421364 A0A0G2JS52 829 aa16.92■□□□□ 0.3
ARID4B-205ENST00000421364 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
ARID4B-205ENST00000421364 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
ARID4B-205ENST00000421364 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
ARID4B-205ENST00000421364 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
ARID4B-205ENST00000421364 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
ARID4B-205ENST00000421364 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
ARID4B-205ENST00000421364 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
ARID4B-205ENST00000421364 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.28
ARID4B-205ENST00000421364 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
ARID4B-205ENST00000421364 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
ARID4B-205ENST00000421364 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
ARID4B-205ENST00000421364 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
ARID4B-205ENST00000421364 MLECQ14165 292 aa16.71■□□□□ 0.27
ARID4B-205ENST00000421364 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
ARID4B-205ENST00000421364 CLIP1P30622 1438 aa16.69■□□□□ 0.26
ARID4B-205ENST00000421364 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
ARID4B-205ENST00000421364 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
ARID4B-205ENST00000421364 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
ARID4B-205ENST00000421364 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
ARID4B-205ENST00000421364 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
ARID4B-205ENST00000421364 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms