RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 MYT1Q01538 1121 aa8.56□□□□□ -1.04
NEAT1-202ENST00000501122 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.06
NEAT1-202ENST00000501122 TTBK1Q5TCY1 1321 aaPredicted RBP7.91□□□□□ -1.14
NEAT1-202ENST00000501122 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
NEAT1-202ENST00000501122 CENPBP07199 599 aaPredicted RBP7.58□□□□□ -1.2
NEAT1-202ENST00000501122 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
NEAT1-202ENST00000501122 YTHDC1Q96MU7 727 aaKnown RBP7.48□□□□□ -1.21
NEAT1-202ENST00000501122 RANGAP1P46060 587 aaPredicted RBP7.43□□□□□ -1.22
NEAT1-202ENST00000501122 SLC24A1O60721 1099 aa7.41□□□□□ -1.22
NEAT1-202ENST00000501122 HRCP23327 699 aa7.33□□□□□ -1.24
NEAT1-202ENST00000501122 ZEB1P37275 1124 aaPredicted RBP7.32□□□□□ -1.24
NEAT1-202ENST00000501122 PPARGC1BQ86YN6 1023 aaKnown RBP7.3□□□□□ -1.24
NEAT1-202ENST00000501122 GLIPR1L2Q4G1C9 344 aa7.27□□□□□ -1.25
NEAT1-202ENST00000501122 PCGF6Q9BYE7 350 aa7.26□□□□□ -1.25
NEAT1-202ENST00000501122 NEFLP07196 543 aa7.19□□□□□ -1.26
NEAT1-202ENST00000501122 EIF5BO60841 1220 aaKnown RBP7.19□□□□□ -1.26
NEAT1-202ENST00000501122 EHMT2Q96KQ7 1210 aa7.19□□□□□ -1.26
NEAT1-202ENST00000501122 RTL5Q5HYW3 569 aaPredicted RBP7.14□□□□□ -1.27
NEAT1-202ENST00000501122 BCL11AQ9H165 835 aa7.13□□□□□ -1.27
NEAT1-202ENST00000501122 DAXXQ9UER7 740 aaPredicted RBP7.09□□□□□ -1.27
NEAT1-202ENST00000501122 SCAF1Q9H7N4 1312 aaKnown RBP7.08□□□□□ -1.28
NEAT1-202ENST00000501122 MYT1LQ9UL68 1186 aa7.07□□□□□ -1.28
NEAT1-202ENST00000501122 GTF3C3Q9Y5Q9 886 aa7.05□□□□□ -1.28
NEAT1-202ENST00000501122 DCAF8L2P0C7V8 631 aa7.04□□□□□ -1.28
NEAT1-202ENST00000501122 SUPT5HO00267 1087 aaKnown RBP6.96□□□□□ -1.29
NEAT1-202ENST00000501122 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
NEAT1-202ENST00000501122 ACIN1Q9UKV3 1341 aaKnown RBP6.94□□□□□ -1.3
NEAT1-202ENST00000501122 ANP32EQ9BTT0 268 aa6.92□□□□□ -1.3
NEAT1-202ENST00000501122 ZNF316A6NFI3 1004 aaPredicted RBP6.91□□□□□ -1.3
NEAT1-202ENST00000501122 CLSPNQ9HAW4 1339 aa6.88□□□□□ -1.31
NEAT1-202ENST00000501122 TNNT2P45379 298 aaPredicted RBP6.88□□□□□ -1.31
NEAT1-202ENST00000501122 CDK11AQ9UQ88 783 aaPredicted RBP6.87□□□□□ -1.31
NEAT1-202ENST00000501122 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
NEAT1-202ENST00000501122 POLR3GLQ9BT43 218 aa6.84□□□□□ -1.31
NEAT1-202ENST00000501122 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
NEAT1-202ENST00000501122 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
NEAT1-202ENST00000501122 NEUROD1Q13562 356 aa6.82□□□□□ -1.32
NEAT1-202ENST00000501122 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
NEAT1-202ENST00000501122 TRIM26Q12899 539 aaPredicted RBP6.78□□□□□ -1.32
NEAT1-202ENST00000501122 FAM9AQ8IZU1 332 aaPredicted RBP6.77□□□□□ -1.33
NEAT1-202ENST00000501122 ZNF326Q5BKZ1 582 aaKnown RBP6.76□□□□□ -1.33
NEAT1-202ENST00000501122 BCANQ96GW7 911 aa6.74□□□□□ -1.33
NEAT1-202ENST00000501122 ERICH6BQ5W0A0 696 aa6.74□□□□□ -1.33
NEAT1-202ENST00000501122 APLP2Q06481 763 aa6.73□□□□□ -1.33
NEAT1-202ENST00000501122 NBR1Q14596 966 aa6.72□□□□□ -1.33
NEAT1-202ENST00000501122 ANP32AP39687 249 aaKnown RBP6.72□□□□□ -1.33
NEAT1-202ENST00000501122 CDK11BP21127 795 aaKnown RBP6.71□□□□□ -1.34
NEAT1-202ENST00000501122 PTMSP20962 102 aa6.69□□□□□ -1.34
NEAT1-202ENST00000501122 ANP32BQ92688 251 aaKnown RBP6.68□□□□□ -1.34
NEAT1-202ENST00000501122 CNGB1Q14028 1251 aaPredicted RBP6.68□□□□□ -1.34
NEAT1-202ENST00000501122 PKNOX2Q96KN3 472 aa6.68□□□□□ -1.34
NEAT1-202ENST00000501122 TRIM44Q96DX7 344 aaPredicted RBP6.67□□□□□ -1.34
NEAT1-202ENST00000501122 RTN4Q9NQC3 1192 aaKnown RBP6.67□□□□□ -1.34
NEAT1-202ENST00000501122 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.66□□□□□ -1.34
NEAT1-202ENST00000501122 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
NEAT1-202ENST00000501122 VSIG10Q8N0Z9 540 aa6.65□□□□□ -1.34
NEAT1-202ENST00000501122 DEKP35659 375 aaKnown RBP6.65□□□□□ -1.34
NEAT1-202ENST00000501122 CHIC1Q5VXU3 224 aa6.65□□□□□ -1.34
NEAT1-202ENST00000501122 A0A0U1RQG5 324 aaPredicted RBP6.65□□□□□ -1.35
NEAT1-202ENST00000501122 CSRNP3Q8WYN3 585 aa6.64□□□□□ -1.35
NEAT1-202ENST00000501122 CCDC136Q96JN2 1154 aa6.63□□□□□ -1.35
NEAT1-202ENST00000501122 NAP1L5Q96NT1 182 aaPredicted RBP6.62□□□□□ -1.35
NEAT1-202ENST00000501122 HSP90AA1P07900 732 aaKnown RBP6.61□□□□□ -1.35
NEAT1-202ENST00000501122 PDE4CQ08493 712 aa6.6□□□□□ -1.35
NEAT1-202ENST00000501122 AMER1Q5JTC6 1135 aaPredicted RBP6.59□□□□□ -1.36
NEAT1-202ENST00000501122 RSPH6AQ9H0K4 717 aa6.57□□□□□ -1.36
NEAT1-202ENST00000501122 ANO8Q9HCE9 1232 aaPredicted RBP6.56□□□□□ -1.36
NEAT1-202ENST00000501122 NEFMP07197 916 aa6.56□□□□□ -1.36
NEAT1-202ENST00000501122 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
NEAT1-202ENST00000501122 APPP05067 770 aa6.55□□□□□ -1.36
NEAT1-202ENST00000501122 FKBP8Q14318 412 aa6.54□□□□□ -1.36
NEAT1-202ENST00000501122 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
NEAT1-202ENST00000501122 TNNT3P45378 269 aaPredicted RBP6.52□□□□□ -1.37
NEAT1-202ENST00000501122 UBE2Q2Q8WVN8 375 aa6.51□□□□□ -1.37
NEAT1-202ENST00000501122 MIER1Q8N108 512 aa6.51□□□□□ -1.37
NEAT1-202ENST00000501122 DNTTIP2Q5QJE6 756 aaKnown RBP6.49□□□□□ -1.37
NEAT1-202ENST00000501122 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
NEAT1-202ENST00000501122 SHROOM4Q9ULL8 1493 aa6.49□□□□□ -1.37
NEAT1-202ENST00000501122 HAP1P54257 671 aaPredicted RBP6.47□□□□□ -1.37
NEAT1-202ENST00000501122 TSHZ2Q9NRE2 1034 aa6.47□□□□□ -1.37
NEAT1-202ENST00000501122 PPM1GO15355 546 aaPredicted RBP6.47□□□□□ -1.37
NEAT1-202ENST00000501122 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
NEAT1-202ENST00000501122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.46□□□□□ -1.38
NEAT1-202ENST00000501122 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
NEAT1-202ENST00000501122 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
NEAT1-202ENST00000501122 PNNQ9H307 717 aaKnown RBP6.45□□□□□ -1.38
NEAT1-202ENST00000501122 ARXQ96QS3 562 aa6.44□□□□□ -1.38
NEAT1-202ENST00000501122 ATP1B4Q9UN42 357 aaPredicted RBP6.44□□□□□ -1.38
NEAT1-202ENST00000501122 NOP58Q9Y2X3 529 aaKnown RBP6.44□□□□□ -1.38
NEAT1-202ENST00000501122 CANXP27824 592 aaKnown RBP6.44□□□□□ -1.38
NEAT1-202ENST00000501122 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
NEAT1-202ENST00000501122 CALRP27797 417 aaKnown RBP6.42□□□□□ -1.38
NEAT1-202ENST00000501122 ITGAEP38570 1179 aa6.42□□□□□ -1.38
NEAT1-202ENST00000501122 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
NEAT1-202ENST00000501122 TAF7LQ5H9L4 462 aa6.42□□□□□ -1.38
NEAT1-202ENST00000501122 DDRGK1Q96HY6 314 aa6.41□□□□□ -1.38
NEAT1-202ENST00000501122 ANP32CO43423 234 aa6.4□□□□□ -1.38
NEAT1-202ENST00000501122 SALL2Q9Y467 1007 aaPredicted RBP6.4□□□□□ -1.39
NEAT1-202ENST00000501122 TULP1O00294 542 aaPredicted RBP6.38□□□□□ -1.39
NEAT1-202ENST00000501122 L1TD1Q5T7N2 865 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms