RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
GREB1-201ENST00000234142 DCAF8L2P0C7V8 631 aa19.49■□□□□ 0.71
GREB1-201ENST00000234142 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
GREB1-201ENST00000234142 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
GREB1-201ENST00000234142 APLP2Q06481 763 aa18.48■□□□□ 0.55
GREB1-201ENST00000234142 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
GREB1-201ENST00000234142 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
GREB1-201ENST00000234142 MYT1Q01538 1121 aa18.31■□□□□ 0.52
GREB1-201ENST00000234142 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
GREB1-201ENST00000234142 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
GREB1-201ENST00000234142 NEFLP07196 543 aa17.97■□□□□ 0.47
GREB1-201ENST00000234142 YTHDC1Q96MU7 727 aaKnown RBP17.9■□□□□ 0.46
GREB1-201ENST00000234142 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.46
GREB1-201ENST00000234142 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
GREB1-201ENST00000234142 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.43
GREB1-201ENST00000234142 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
GREB1-201ENST00000234142 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
GREB1-201ENST00000234142 ATP1B4Q9UN42 357 aaPredicted RBP17.49■□□□□ 0.39
GREB1-201ENST00000234142 NISCHQ9Y2I1 1504 aa17.35■□□□□ 0.37
GREB1-201ENST00000234142 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
GREB1-201ENST00000234142 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
GREB1-201ENST00000234142 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
GREB1-201ENST00000234142 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
GREB1-201ENST00000234142 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
GREB1-201ENST00000234142 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
GREB1-201ENST00000234142 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
GREB1-201ENST00000234142 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
GREB1-201ENST00000234142 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
GREB1-201ENST00000234142 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
GREB1-201ENST00000234142 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.29
GREB1-201ENST00000234142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
GREB1-201ENST00000234142 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
GREB1-201ENST00000234142 ITGAEP38570 1179 aa16.69■□□□□ 0.26
GREB1-201ENST00000234142 HRCP23327 699 aa16.68■□□□□ 0.26
GREB1-201ENST00000234142 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
GREB1-201ENST00000234142 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
GREB1-201ENST00000234142 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
GREB1-201ENST00000234142 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.25
GREB1-201ENST00000234142 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.24
GREB1-201ENST00000234142 GLIPR1L2Q4G1C9 344 aa16.55■□□□□ 0.24
GREB1-201ENST00000234142 NEFMP07197 916 aa16.5■□□□□ 0.23
GREB1-201ENST00000234142 CANXP27824 592 aaKnown RBP16.49■□□□□ 0.23
GREB1-201ENST00000234142 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
GREB1-201ENST00000234142 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
GREB1-201ENST00000234142 SLC24A1O60721 1099 aa16.42■□□□□ 0.22
GREB1-201ENST00000234142 ANP32CO43423 234 aa16.4■□□□□ 0.22
GREB1-201ENST00000234142 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
GREB1-201ENST00000234142 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
GREB1-201ENST00000234142 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
GREB1-201ENST00000234142 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
GREB1-201ENST00000234142 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.2
GREB1-201ENST00000234142 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
GREB1-201ENST00000234142 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
GREB1-201ENST00000234142 BCANQ96GW7 911 aa16.23■□□□□ 0.19
GREB1-201ENST00000234142 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
GREB1-201ENST00000234142 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
GREB1-201ENST00000234142 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
GREB1-201ENST00000234142 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
GREB1-201ENST00000234142 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
GREB1-201ENST00000234142 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
GREB1-201ENST00000234142 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
GREB1-201ENST00000234142 ANP32EQ9BTT0 268 aa15.92■□□□□ 0.14
GREB1-201ENST00000234142 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
GREB1-201ENST00000234142 TRIM44Q96DX7 344 aaPredicted RBP15.86■□□□□ 0.13
GREB1-201ENST00000234142 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
GREB1-201ENST00000234142 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
GREB1-201ENST00000234142 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
GREB1-201ENST00000234142 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
GREB1-201ENST00000234142 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
GREB1-201ENST00000234142 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
GREB1-201ENST00000234142 BECN1Q14457 450 aa15.78■□□□□ 0.12
GREB1-201ENST00000234142 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
GREB1-201ENST00000234142 FKBP8Q14318 412 aa15.76■□□□□ 0.11
GREB1-201ENST00000234142 NBR1Q14596 966 aa15.75■□□□□ 0.11
GREB1-201ENST00000234142 ARXQ96QS3 562 aa15.75■□□□□ 0.11
GREB1-201ENST00000234142 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
GREB1-201ENST00000234142 FBLN2P98095 1184 aa15.71■□□□□ 0.11
GREB1-201ENST00000234142 TONSLQ96HA7 1378 aa15.71■□□□□ 0.1
GREB1-201ENST00000234142 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.19e-8■■□□□ 13.2
GREB1-201ENST00000234142 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
GREB1-201ENST00000234142 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
GREB1-201ENST00000234142 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
GREB1-201ENST00000234142 DNTTIP2Q5QJE6 756 aaKnown RBP15.66■□□□□ 0.1
GREB1-201ENST00000234142 GOLGA6L6A8MZA4 724 aa15.65■□□□□ 0.1
GREB1-201ENST00000234142 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
GREB1-201ENST00000234142 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
GREB1-201ENST00000234142 CHGAP10645 457 aaKnown RBP15.61■□□□□ 0.09
GREB1-201ENST00000234142 NRDCO43847 1150 aa15.6■□□□□ 0.09
GREB1-201ENST00000234142 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
GREB1-201ENST00000234142 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
GREB1-201ENST00000234142 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
GREB1-201ENST00000234142 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
GREB1-201ENST00000234142 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
GREB1-201ENST00000234142 A0A0G2JS52 829 aa15.51■□□□□ 0.07
GREB1-201ENST00000234142 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
GREB1-201ENST00000234142 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
GREB1-201ENST00000234142 TULP1O00294 542 aaPredicted RBP15.45■□□□□ 0.06
GREB1-201ENST00000234142 NAP1L5Q96NT1 182 aaPredicted RBP15.45■□□□□ 0.06
GREB1-201ENST00000234142 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
GREB1-201ENST00000234142 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms