RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 NISCHQ9Y2I1 1504 aa53.08■■■■■ 6.09
RUNX1-204ENST00000399237 CCDC180Q9P1Z9 1646 aa47.38■■■■■ 5.18
RUNX1-204ENST00000399237 ABCC9O60706 1549 aa47■■■■■ 5.11
RUNX1-204ENST00000399237 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
RUNX1-204ENST00000399237 NACADO15069 1562 aa44.56■■■■■ 4.72
RUNX1-204ENST00000399237 DCAF8L2P0C7V8 631 aa44.33■■■■■ 4.69
RUNX1-204ENST00000399237 ZCCHC6Q5VYS8 1495 aaKnown RBP44.17■■■■■ 4.66
RUNX1-204ENST00000399237 MYO15BQ96JP2 1530 aa44.16■■■■■ 4.66
RUNX1-204ENST00000399237 DNAJC5BQ9UF47 199 aa43.99■■■■■ 4.63
RUNX1-204ENST00000399237 UNC13AQ9UPW8 1703 aa43.93■■■■■ 4.62
RUNX1-204ENST00000399237 DCAF1Q9Y4B6 1507 aa43.86■■■■■ 4.61
RUNX1-204ENST00000399237 PABPN1Q86U42 306 aaKnown RBP eCLIP43.79■■■■■ 4.6
RUNX1-204ENST00000399237 BICRAQ9NZM4 1560 aa43.56■■■■■ 4.56
RUNX1-204ENST00000399237 SCRIBQ14160 1630 aa43.25■■■■■ 4.51
RUNX1-204ENST00000399237 SHROOM4Q9ULL8 1493 aa42.84■■■■■ 4.45
RUNX1-204ENST00000399237 CC2D2AQ9P2K1 1620 aa42.41■■■■■ 4.38
RUNX1-204ENST00000399237 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
RUNX1-204ENST00000399237 CECR2Q9BXF3 1484 aa42.31■■■■■ 4.36
RUNX1-204ENST00000399237 SMARCA4P51532 1647 aa41.32■■■■■ 4.2
RUNX1-204ENST00000399237 ATAD2BQ9ULI0 1458 aa41.15■■■■■ 4.18
RUNX1-204ENST00000399237 NCAPD3P42695 1498 aa41.14■■■■■ 4.18
RUNX1-204ENST00000399237 BAZ1AQ9NRL2 1556 aaPredicted RBP41.12■■■■■ 4.17
RUNX1-204ENST00000399237 SMARCA2P51531 1590 aa41.01■■■■■ 4.16
RUNX1-204ENST00000399237 MROH2BQ7Z745 1585 aa40.97■■■■■ 4.15
RUNX1-204ENST00000399237 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
RUNX1-204ENST00000399237 PEG3Q9GZU2 1588 aa40.9■■■■■ 4.14
RUNX1-204ENST00000399237 BAZ1BQ9UIG0 1483 aaKnown RBP40.74■■■■■ 4.11
RUNX1-204ENST00000399237 ERCC6Q03468 1493 aa40.58■■■■■ 4.09
RUNX1-204ENST00000399237 WIZO95785 1651 aa40.53■■■■■ 4.08
RUNX1-204ENST00000399237 CUX2O14529 1486 aa40.43■■■■■ 4.06
RUNX1-204ENST00000399237 NESP48681 1621 aa40.41■■■■■ 4.06
RUNX1-204ENST00000399237 DNAJC5Q9H3Z4 198 aa40.3■■■■■ 4.04
RUNX1-204ENST00000399237 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
RUNX1-204ENST00000399237 LAMC3Q9Y6N6 1575 aa40.13■■■■■ 4.01
RUNX1-204ENST00000399237 TOP2AP11388 1531 aaKnown RBP40■■■■□ 3.99
RUNX1-204ENST00000399237 KIF21AQ7Z4S6 1674 aa39.95■■■■□ 3.99
RUNX1-204ENST00000399237 THOC2Q8NI27 1593 aaKnown RBP39.93■■■■□ 3.98
RUNX1-204ENST00000399237 CADPSQ9ULU8 1353 aa39.88■■■■□ 3.97
RUNX1-204ENST00000399237 PDS5BQ9NTI5 1447 aa39.87■■■■□ 3.97
RUNX1-204ENST00000399237 CFTRP13569 1480 aa39.62■■■■□ 3.93
RUNX1-204ENST00000399237 CCDC88BA6NC98 1476 aa39.53■■■■□ 3.92
RUNX1-204ENST00000399237 MRC2Q9UBG0 1479 aa39.53■■■■□ 3.92
RUNX1-204ENST00000399237 FANCD2Q9BXW9 1451 aa39.48■■■■□ 3.91
RUNX1-204ENST00000399237 CEP164Q9UPV0 1460 aa39.44■■■■□ 3.9
RUNX1-204ENST00000399237 WDR62O43379 1518 aa39.43■■■■□ 3.9
RUNX1-204ENST00000399237 PRDM2Q13029 1718 aa39.38■■■■□ 3.89
RUNX1-204ENST00000399237 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
RUNX1-204ENST00000399237 SUPT5HO00267 1087 aaKnown RBP38.86■■■■□ 3.81
RUNX1-204ENST00000399237 TOPBP1Q92547 1522 aa38.84■■■■□ 3.81
RUNX1-204ENST00000399237 DNMBPQ6XZF7 1577 aa38.75■■■■□ 3.79
RUNX1-204ENST00000399237 ABCC8Q09428 1581 aa38.65■■■■□ 3.78
RUNX1-204ENST00000399237 TRIM41Q8WV44 630 aa38.64■■■■□ 3.78
RUNX1-204ENST00000399237 IFT140Q96RY7 1462 aa38.61■■■■□ 3.77
RUNX1-204ENST00000399237 ZNF608Q9ULD9 1512 aaPredicted RBP38.61■■■■□ 3.77
RUNX1-204ENST00000399237 OSCARQ8IYS5 282 aa38.6■■■■□ 3.77
RUNX1-204ENST00000399237 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
RUNX1-204ENST00000399237 POLA1P09884 1462 aaPredicted RBP38.49■■■■□ 3.75
RUNX1-204ENST00000399237 CUX1P39880 1505 aa38.45■■■■□ 3.75
RUNX1-204ENST00000399237 EIF4G3O43432 1585 aaKnown RBP38.44■■■■□ 3.74
RUNX1-204ENST00000399237 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
RUNX1-204ENST00000399237 FGD5Q6ZNL6 1462 aa38.34■■■■□ 3.73
RUNX1-204ENST00000399237 AQRO60306 1485 aaKnown RBP eCLIP38.28■■■■□ 3.721e-6■■■■□ 20.5
RUNX1-204ENST00000399237 SOGA1O94964 1423 aa38.23■■■■□ 3.71
RUNX1-204ENST00000399237 WDR97A6NE52 1622 aa38.16■■■■□ 3.7
RUNX1-204ENST00000399237 TDRD9Q8NDG6 1382 aaKnown RBP38.11■■■■□ 3.69
RUNX1-204ENST00000399237 RIMBP3CA6NJZ7 1639 aa38.07■■■■□ 3.68
RUNX1-204ENST00000399237 RIMBP3BA6NNM3 1639 aa38.07■■■■□ 3.68
RUNX1-204ENST00000399237 RIMBP3Q9UFD9 1639 aa38.07■■■■□ 3.68
RUNX1-204ENST00000399237 CHD1O14646 1710 aa38.06■■■■□ 3.68
RUNX1-204ENST00000399237 SYNJ1O43426 1573 aa38.02■■■■□ 3.68
RUNX1-204ENST00000399237 BIVM-ERCC5R4GMW8 1640 aa38.01■■■■□ 3.68
RUNX1-204ENST00000399237 ARHGEF11O15085 1522 aa38■■■■□ 3.67
RUNX1-204ENST00000399237 TOP2BQ02880 1626 aa37.98■■■■□ 3.67
RUNX1-204ENST00000399237 FBLN2P98095 1184 aa37.96■■■■□ 3.67
RUNX1-204ENST00000399237 WRNQ14191 1432 aaPredicted RBP eCLIP37.94■■■■□ 3.66
RUNX1-204ENST00000399237 SNAPC4Q5SXM2 1469 aa37.92■■■■□ 3.66
RUNX1-204ENST00000399237 ABCA10Q8WWZ4 1543 aa37.91■■■■□ 3.66
RUNX1-204ENST00000399237 ABCA5Q8WWZ7 1642 aa37.89■■■■□ 3.66
RUNX1-204ENST00000399237 PBRM1Q86U86 1689 aa37.88■■■■□ 3.66
RUNX1-204ENST00000399237 GRIN2BQ13224 1484 aa37.84■■■■□ 3.65
RUNX1-204ENST00000399237 GAPVD1Q14C86 1478 aa37.81■■■■□ 3.64
RUNX1-204ENST00000399237 MAGI1Q96QZ7 1491 aaPredicted RBP37.78■■■■□ 3.64
RUNX1-204ENST00000399237 CYB5RLQ6IPT4 315 aa37.72■■■■□ 3.63
RUNX1-204ENST00000399237 CHMP7Q8WUX9 453 aaPredicted RBP37.67■■■■□ 3.62
RUNX1-204ENST00000399237 SYNJ2O15056 1496 aa37.66■■■■□ 3.62
RUNX1-204ENST00000399237 ARAP1Q96P48 1450 aa37.64■■■■□ 3.62
RUNX1-204ENST00000399237 CLASP1Q7Z460 1538 aa37.61■■■■□ 3.61
RUNX1-204ENST00000399237 ADAMTS12P58397 1594 aa37.54■■■■□ 3.6
RUNX1-204ENST00000399237 ERICH3Q5RHP9 1530 aa37.43■■■■□ 3.58
RUNX1-204ENST00000399237 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
RUNX1-204ENST00000399237 FHAD1B1AJZ9 1412 aa37.33■■■■□ 3.57
RUNX1-204ENST00000399237 CEP170Q5SW79 1584 aa37.33■■■■□ 3.57
RUNX1-204ENST00000399237 TRHP20396 242 aaPredicted RBP37.29■■■■□ 3.56
RUNX1-204ENST00000399237 NUP160Q12769 1436 aa37.27■■■■□ 3.56
RUNX1-204ENST00000399237 ERCC6L2Q5T890 1561 aa37.14■■■■□ 3.54
RUNX1-204ENST00000399237 KIF27Q86VH2 1401 aa37.11■■■■□ 3.53
RUNX1-204ENST00000399237 SHROOM2Q13796 1616 aa37.1■■■■□ 3.53
RUNX1-204ENST00000399237 IGF1RP08069 1367 aa37.09■■■■□ 3.53
RUNX1-204ENST00000399237 CUL7Q14999 1698 aa37.03■■■■□ 3.52
RUNX1-204ENST00000399237 RUSC2Q8N2Y8 1516 aa37.01■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms