RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
RUNX1-201ENST00000300305 EHMT2Q96KQ7 1210 aa27■■□□□ 1.91
RUNX1-201ENST00000300305 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
RUNX1-201ENST00000300305 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.8
RUNX1-201ENST00000300305 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
RUNX1-201ENST00000300305 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
RUNX1-201ENST00000300305 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
RUNX1-201ENST00000300305 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.69
RUNX1-201ENST00000300305 RANGAP1P46060 587 aaPredicted RBP25.5■■□□□ 1.67
RUNX1-201ENST00000300305 APLP2Q06481 763 aa25.45■■□□□ 1.67
RUNX1-201ENST00000300305 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
RUNX1-201ENST00000300305 ERICH6Q7L0X2 663 aa25.31■■□□□ 1.64
RUNX1-201ENST00000300305 ATP1B4Q9UN42 357 aaPredicted RBP25.06■■□□□ 1.6
RUNX1-201ENST00000300305 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
RUNX1-201ENST00000300305 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.58
RUNX1-201ENST00000300305 CENPBP07199 599 aaPredicted RBP24.82■■□□□ 1.56
RUNX1-201ENST00000300305 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
RUNX1-201ENST00000300305 MYT1Q01538 1121 aa24.75■■□□□ 1.55
RUNX1-201ENST00000300305 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
RUNX1-201ENST00000300305 NEFLP07196 543 aa24.47■■□□□ 1.51
RUNX1-201ENST00000300305 UBTFP17480 764 aaKnown RBP24.46■■□□□ 1.51
RUNX1-201ENST00000300305 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
RUNX1-201ENST00000300305 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
RUNX1-201ENST00000300305 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
RUNX1-201ENST00000300305 ITGAEP38570 1179 aa24.21■■□□□ 1.47
RUNX1-201ENST00000300305 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
RUNX1-201ENST00000300305 MYT1LQ9UL68 1186 aa24.05■■□□□ 1.44
RUNX1-201ENST00000300305 DAXXQ9UER7 740 aaPredicted RBP24.01■■□□□ 1.43
RUNX1-201ENST00000300305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
RUNX1-201ENST00000300305 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.41
RUNX1-201ENST00000300305 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
RUNX1-201ENST00000300305 HRCP23327 699 aa23.77■■□□□ 1.4
RUNX1-201ENST00000300305 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
RUNX1-201ENST00000300305 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
RUNX1-201ENST00000300305 BCANQ96GW7 911 aa23.57■■□□□ 1.36
RUNX1-201ENST00000300305 CLSPNQ9HAW4 1339 aa23.54■■□□□ 1.36
RUNX1-201ENST00000300305 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
RUNX1-201ENST00000300305 BCL11AQ9H165 835 aa23.5■■□□□ 1.35
RUNX1-201ENST00000300305 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.34
RUNX1-201ENST00000300305 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
RUNX1-201ENST00000300305 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
RUNX1-201ENST00000300305 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
RUNX1-201ENST00000300305 ZNF326Q5BKZ1 582 aaKnown RBP23.18■■□□□ 1.3
RUNX1-201ENST00000300305 TRIM52Q96A61 297 aa23.16■■□□□ 1.3
RUNX1-201ENST00000300305 SLC24A1O60721 1099 aa23.14■■□□□ 1.3
RUNX1-201ENST00000300305 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
RUNX1-201ENST00000300305 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
RUNX1-201ENST00000300305 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
RUNX1-201ENST00000300305 NPM2Q86SE8 214 aaKnown RBP22.87■■□□□ 1.25
RUNX1-201ENST00000300305 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
RUNX1-201ENST00000300305 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.24
RUNX1-201ENST00000300305 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
RUNX1-201ENST00000300305 ANP32CO43423 234 aa22.78■■□□□ 1.24
RUNX1-201ENST00000300305 FBLN2P98095 1184 aa22.7■■□□□ 1.22
RUNX1-201ENST00000300305 ABCC9O60706 1549 aa22.69■■□□□ 1.22
RUNX1-201ENST00000300305 EIF5BO60841 1220 aaKnown RBP22.66■■□□□ 1.22
RUNX1-201ENST00000300305 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
RUNX1-201ENST00000300305 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
RUNX1-201ENST00000300305 ARXQ96QS3 562 aa22.57■■□□□ 1.2
RUNX1-201ENST00000300305 SALL2Q9Y467 1007 aaPredicted RBP22.54■■□□□ 1.2
RUNX1-201ENST00000300305 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
RUNX1-201ENST00000300305 ZNF777Q9ULD5 760 aaPredicted RBP22.46■■□□□ 1.19
RUNX1-201ENST00000300305 FKBP8Q14318 412 aa22.44■■□□□ 1.18
RUNX1-201ENST00000300305 NBR1Q14596 966 aa22.42■■□□□ 1.18
RUNX1-201ENST00000300305 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
RUNX1-201ENST00000300305 NEFMP07197 916 aa22.36■■□□□ 1.17
RUNX1-201ENST00000300305 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
RUNX1-201ENST00000300305 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
RUNX1-201ENST00000300305 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
RUNX1-201ENST00000300305 CHGAP10645 457 aaKnown RBP22.3■■□□□ 1.16
RUNX1-201ENST00000300305 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
RUNX1-201ENST00000300305 PLEKHG5O94827 1062 aa22.24■■□□□ 1.15
RUNX1-201ENST00000300305 SENP3-EIF4A1A0A087X0R7 540 aa22.23■■□□□ 1.15
RUNX1-201ENST00000300305 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
RUNX1-201ENST00000300305 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
RUNX1-201ENST00000300305 ANP32BQ92688 251 aaKnown RBP22.15■■□□□ 1.14
RUNX1-201ENST00000300305 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
RUNX1-201ENST00000300305 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
RUNX1-201ENST00000300305 A0A0G2JS52 829 aa22.07■■□□□ 1.12
RUNX1-201ENST00000300305 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
RUNX1-201ENST00000300305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■■□□□ 11.6
RUNX1-201ENST00000300305 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
RUNX1-201ENST00000300305 CSRNP3Q8WYN3 585 aa22.03■■□□□ 1.12
RUNX1-201ENST00000300305 TPRNQ4KMQ1 711 aa22.02■■□□□ 1.12
RUNX1-201ENST00000300305 ZBTB7CA1YPR0 619 aa22■■□□□ 1.11
RUNX1-201ENST00000300305 UPF2Q9HAU5 1272 aaKnown RBP21.99■■□□□ 1.11
RUNX1-201ENST00000300305 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
RUNX1-201ENST00000300305 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
RUNX1-201ENST00000300305 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.11
RUNX1-201ENST00000300305 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
RUNX1-201ENST00000300305 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
RUNX1-201ENST00000300305 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
RUNX1-201ENST00000300305 TULP1O00294 542 aaPredicted RBP21.83■■□□□ 1.09
RUNX1-201ENST00000300305 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
RUNX1-201ENST00000300305 TAOK2Q9UL54 1235 aa21.8■■□□□ 1.08
RUNX1-201ENST00000300305 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
RUNX1-201ENST00000300305 MIER1Q8N108 512 aa21.78■■□□□ 1.08
RUNX1-201ENST00000300305 RTN4Q9NQC3 1192 aaKnown RBP21.75■■□□□ 1.07
RUNX1-201ENST00000300305 GLIPR1L2Q4G1C9 344 aa21.75■■□□□ 1.07
RUNX1-201ENST00000300305 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms