RNA–Protein interactions for RNA: ENST00000490012.6

CCNY-207, Transcript of cyclin Y, humanhuman

TSL 3

Gene CCNY, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-207ENST00000490012 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
CCNY-207ENST00000490012 ABCC9O60706 1549 aa36.04■■■■□ 3.36
CCNY-207ENST00000490012 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
CCNY-207ENST00000490012 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
CCNY-207ENST00000490012 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
CCNY-207ENST00000490012 NACADO15069 1562 aa33.64■■■□□ 2.98
CCNY-207ENST00000490012 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
CCNY-207ENST00000490012 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
CCNY-207ENST00000490012 UNC13AQ9UPW8 1703 aa33.14■■■□□ 2.89
CCNY-207ENST00000490012 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
CCNY-207ENST00000490012 MYO15BQ96JP2 1530 aa32.97■■■□□ 2.87
CCNY-207ENST00000490012 CECR2Q9BXF3 1484 aa32.5■■■□□ 2.79
CCNY-207ENST00000490012 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
CCNY-207ENST00000490012 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
CCNY-207ENST00000490012 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
CCNY-207ENST00000490012 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
CCNY-207ENST00000490012 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
CCNY-207ENST00000490012 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
CCNY-207ENST00000490012 DNAJC5Q9H3Z4 198 aa31.82■■■□□ 2.68
CCNY-207ENST00000490012 CUX2O14529 1486 aa31.21■■■□□ 2.59
CCNY-207ENST00000490012 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
CCNY-207ENST00000490012 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
CCNY-207ENST00000490012 ATAD2BQ9ULI0 1458 aa30.94■■■□□ 2.54
CCNY-207ENST00000490012 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
CCNY-207ENST00000490012 NESP48681 1621 aa30.79■■■□□ 2.52
CCNY-207ENST00000490012 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
CCNY-207ENST00000490012 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
CCNY-207ENST00000490012 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
CCNY-207ENST00000490012 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
CCNY-207ENST00000490012 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
CCNY-207ENST00000490012 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.46
CCNY-207ENST00000490012 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
CCNY-207ENST00000490012 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
CCNY-207ENST00000490012 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
CCNY-207ENST00000490012 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
CCNY-207ENST00000490012 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
CCNY-207ENST00000490012 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
CCNY-207ENST00000490012 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
CCNY-207ENST00000490012 WDR62O43379 1518 aa30.01■■■□□ 2.39
CCNY-207ENST00000490012 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
CCNY-207ENST00000490012 WIZO95785 1651 aa29.86■■■□□ 2.37
CCNY-207ENST00000490012 FANCD2Q9BXW9 1451 aa29.8■■■□□ 2.36
CCNY-207ENST00000490012 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
CCNY-207ENST00000490012 CFTRP13569 1480 aa29.68■■■□□ 2.34
CCNY-207ENST00000490012 URB2Q14146 1524 aaKnown RBP29.58■■■□□ 2.33
CCNY-207ENST00000490012 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
CCNY-207ENST00000490012 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
CCNY-207ENST00000490012 RIMBP3CA6NJZ7 1639 aa29.36■■■□□ 2.29
CCNY-207ENST00000490012 RIMBP3BA6NNM3 1639 aa29.36■■■□□ 2.29
CCNY-207ENST00000490012 RIMBP3Q9UFD9 1639 aa29.36■■■□□ 2.29
CCNY-207ENST00000490012 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
CCNY-207ENST00000490012 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
CCNY-207ENST00000490012 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
CCNY-207ENST00000490012 PRDM2Q13029 1718 aa29.2■■■□□ 2.27
CCNY-207ENST00000490012 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
CCNY-207ENST00000490012 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
CCNY-207ENST00000490012 CYB5RLQ6IPT4 315 aa29.14■■■□□ 2.26
CCNY-207ENST00000490012 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
CCNY-207ENST00000490012 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CCNY-207ENST00000490012 TRHP20396 242 aaPredicted RBP29.01■■■□□ 2.23
CCNY-207ENST00000490012 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.233e-6■■■■□ 22.9
CCNY-207ENST00000490012 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
CCNY-207ENST00000490012 FBLN2P98095 1184 aa28.99■■■□□ 2.23
CCNY-207ENST00000490012 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
CCNY-207ENST00000490012 CHD1O14646 1710 aa28.92■■■□□ 2.22
CCNY-207ENST00000490012 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
CCNY-207ENST00000490012 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
CCNY-207ENST00000490012 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
CCNY-207ENST00000490012 TDRD9Q8NDG6 1382 aaKnown RBP28.76■■■□□ 2.2
CCNY-207ENST00000490012 SOGA1O94964 1423 aa28.73■■■□□ 2.19
CCNY-207ENST00000490012 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
CCNY-207ENST00000490012 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
CCNY-207ENST00000490012 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
CCNY-207ENST00000490012 FGD5Q6ZNL6 1462 aa28.6■■■□□ 2.17
CCNY-207ENST00000490012 SYNJ1O43426 1573 aa28.57■■■□□ 2.16
CCNY-207ENST00000490012 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
CCNY-207ENST00000490012 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
CCNY-207ENST00000490012 AEBP2Q6ZN18 517 aaPredicted RBP28.54■■■□□ 2.16
CCNY-207ENST00000490012 GRIN2BQ13224 1484 aa28.52■■■□□ 2.16
CCNY-207ENST00000490012 CUX1P39880 1505 aa28.48■■■□□ 2.15
CCNY-207ENST00000490012 SYNJ2O15056 1496 aa28.48■■■□□ 2.15
CCNY-207ENST00000490012 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
CCNY-207ENST00000490012 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
CCNY-207ENST00000490012 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
CCNY-207ENST00000490012 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
CCNY-207ENST00000490012 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
CCNY-207ENST00000490012 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
CCNY-207ENST00000490012 NUP160Q12769 1436 aa28.07■■■□□ 2.08
CCNY-207ENST00000490012 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
CCNY-207ENST00000490012 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
CCNY-207ENST00000490012 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
CCNY-207ENST00000490012 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
CCNY-207ENST00000490012 SHROOM2Q13796 1616 aa27.94■■■□□ 2.06
CCNY-207ENST00000490012 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
CCNY-207ENST00000490012 PRG4Q92954 1404 aaPredicted RBP27.87■■■□□ 2.05
CCNY-207ENST00000490012 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
CCNY-207ENST00000490012 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
CCNY-207ENST00000490012 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
CCNY-207ENST00000490012 JPH4Q96JJ6 628 aa27.82■■■□□ 2.04
CCNY-207ENST00000490012 KIF13AQ9H1H9 1805 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms