RNA–Protein interactions for RNA: ENST00000374704.7

CCNY-203, Transcript of cyclin Y, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCNY, Length 3,960 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-203ENST00000374704 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.54
CCNY-203ENST00000374704 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
CCNY-203ENST00000374704 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
CCNY-203ENST00000374704 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
CCNY-203ENST00000374704 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
CCNY-203ENST00000374704 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
CCNY-203ENST00000374704 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
CCNY-203ENST00000374704 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
CCNY-203ENST00000374704 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CCNY-203ENST00000374704 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
CCNY-203ENST00000374704 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
CCNY-203ENST00000374704 HRCP23327 699 aa21.29■■□□□ 1
CCNY-203ENST00000374704 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
CCNY-203ENST00000374704 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
CCNY-203ENST00000374704 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
CCNY-203ENST00000374704 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.93
CCNY-203ENST00000374704 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
CCNY-203ENST00000374704 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
CCNY-203ENST00000374704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
CCNY-203ENST00000374704 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
CCNY-203ENST00000374704 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.87
CCNY-203ENST00000374704 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
CCNY-203ENST00000374704 APLP2Q06481 763 aa20.35■□□□□ 0.85
CCNY-203ENST00000374704 ABCC9O60706 1549 aa20.33■□□□□ 0.85
CCNY-203ENST00000374704 HNRNPUL2Q1KMD3 747 aaKnown RBP20.25■□□□□ 0.83
CCNY-203ENST00000374704 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCNY-203ENST00000374704 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
CCNY-203ENST00000374704 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
CCNY-203ENST00000374704 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
CCNY-203ENST00000374704 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
CCNY-203ENST00000374704 ITGAEP38570 1179 aa20.03■□□□□ 0.8
CCNY-203ENST00000374704 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
CCNY-203ENST00000374704 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CCNY-203ENST00000374704 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
CCNY-203ENST00000374704 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
CCNY-203ENST00000374704 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
CCNY-203ENST00000374704 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
CCNY-203ENST00000374704 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
CCNY-203ENST00000374704 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
CCNY-203ENST00000374704 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
CCNY-203ENST00000374704 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
CCNY-203ENST00000374704 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
CCNY-203ENST00000374704 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
CCNY-203ENST00000374704 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
CCNY-203ENST00000374704 MIER1Q8N108 512 aa19.45■□□□□ 0.7
CCNY-203ENST00000374704 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
CCNY-203ENST00000374704 BCANQ96GW7 911 aa19.42■□□□□ 0.7
CCNY-203ENST00000374704 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
CCNY-203ENST00000374704 FAM50AQ14320 339 aaKnown RBP19.4■□□□□ 0.7
CCNY-203ENST00000374704 SOGA1O94964 1423 aa19.37■□□□□ 0.69
CCNY-203ENST00000374704 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
CCNY-203ENST00000374704 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
CCNY-203ENST00000374704 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
CCNY-203ENST00000374704 HIRIP3Q9BW71 556 aaPredicted RBP19.24■□□□□ 0.67
CCNY-203ENST00000374704 NEFLP07196 543 aa19.19■□□□□ 0.66
CCNY-203ENST00000374704 WIZO95785 1651 aa19.18■□□□□ 0.66
CCNY-203ENST00000374704 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
CCNY-203ENST00000374704 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
CCNY-203ENST00000374704 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CCNY-203ENST00000374704 RUSC2Q8N2Y8 1516 aa19.12■□□□□ 0.65
CCNY-203ENST00000374704 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
CCNY-203ENST00000374704 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
CCNY-203ENST00000374704 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CCNY-203ENST00000374704 NACADO15069 1562 aa19.02■□□□□ 0.64
CCNY-203ENST00000374704 TRIM52Q96A61 297 aa18.99■□□□□ 0.63
CCNY-203ENST00000374704 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
CCNY-203ENST00000374704 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
CCNY-203ENST00000374704 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
CCNY-203ENST00000374704 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
CCNY-203ENST00000374704 FKBP8Q14318 412 aa18.92■□□□□ 0.62
CCNY-203ENST00000374704 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
CCNY-203ENST00000374704 ANP32CO43423 234 aa18.86■□□□□ 0.61
CCNY-203ENST00000374704 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
CCNY-203ENST00000374704 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
CCNY-203ENST00000374704 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
CCNY-203ENST00000374704 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
CCNY-203ENST00000374704 EEA1Q15075 1411 aa18.81■□□□□ 0.6
CCNY-203ENST00000374704 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
CCNY-203ENST00000374704 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
CCNY-203ENST00000374704 MYT1Q01538 1121 aa18.79■□□□□ 0.6
CCNY-203ENST00000374704 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
CCNY-203ENST00000374704 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
CCNY-203ENST00000374704 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
CCNY-203ENST00000374704 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.588e-7■□□□□ 8.5
CCNY-203ENST00000374704 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
CCNY-203ENST00000374704 FBLN2P98095 1184 aa18.67■□□□□ 0.58
CCNY-203ENST00000374704 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
CCNY-203ENST00000374704 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
CCNY-203ENST00000374704 FAM9BQ8IZU0 186 aa18.65■□□□□ 0.58
CCNY-203ENST00000374704 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
CCNY-203ENST00000374704 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
CCNY-203ENST00000374704 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.56
CCNY-203ENST00000374704 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
CCNY-203ENST00000374704 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
CCNY-203ENST00000374704 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
CCNY-203ENST00000374704 SALL2Q9Y467 1007 aaPredicted RBP18.54■□□□□ 0.56
CCNY-203ENST00000374704 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
CCNY-203ENST00000374704 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
CCNY-203ENST00000374704 CDK11AQ9UQ88 783 aaPredicted RBP18.49■□□□□ 0.55
CCNY-203ENST00000374704 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms