RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 NISCHQ9Y2I1 1504 aa40.85■■■■■ 4.13
SNTB1-203ENST00000519177 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
SNTB1-203ENST00000519177 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
SNTB1-203ENST00000519177 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
SNTB1-203ENST00000519177 DCAF1Q9Y4B6 1507 aa33.76■■■■□ 3
SNTB1-203ENST00000519177 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
SNTB1-203ENST00000519177 MYO15BQ96JP2 1530 aa33.12■■■□□ 2.89
SNTB1-203ENST00000519177 ABCC9O60706 1549 aa32.86■■■□□ 2.85
SNTB1-203ENST00000519177 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
SNTB1-203ENST00000519177 NACADO15069 1562 aa32.74■■■□□ 2.83
SNTB1-203ENST00000519177 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
SNTB1-203ENST00000519177 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
SNTB1-203ENST00000519177 RSF1Q96T23 1441 aaPredicted RBP31.95■■■□□ 2.7
SNTB1-203ENST00000519177 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
SNTB1-203ENST00000519177 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
SNTB1-203ENST00000519177 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.66
SNTB1-203ENST00000519177 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
SNTB1-203ENST00000519177 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
SNTB1-203ENST00000519177 WIZO95785 1651 aa31.37■■■□□ 2.61
SNTB1-203ENST00000519177 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
SNTB1-203ENST00000519177 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
SNTB1-203ENST00000519177 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
SNTB1-203ENST00000519177 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
SNTB1-203ENST00000519177 PEG3Q9GZU2 1588 aa30.85■■■□□ 2.53
SNTB1-203ENST00000519177 TRIM41Q8WV44 630 aa30.8■■■□□ 2.52
SNTB1-203ENST00000519177 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
SNTB1-203ENST00000519177 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
SNTB1-203ENST00000519177 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.52
SNTB1-203ENST00000519177 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
SNTB1-203ENST00000519177 LOC105371045A0A1W2PR82 267 aa30.57■■■□□ 2.48
SNTB1-203ENST00000519177 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
SNTB1-203ENST00000519177 ABCC8Q09428 1581 aa30.31■■■□□ 2.44
SNTB1-203ENST00000519177 FAM9AQ8IZU1 332 aaPredicted RBP30.27■■■□□ 2.44
SNTB1-203ENST00000519177 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
SNTB1-203ENST00000519177 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
SNTB1-203ENST00000519177 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
SNTB1-203ENST00000519177 EEA1Q15075 1411 aa29.93■■■□□ 2.38
SNTB1-203ENST00000519177 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
SNTB1-203ENST00000519177 SOGA1O94964 1423 aa29.89■■■□□ 2.37
SNTB1-203ENST00000519177 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
SNTB1-203ENST00000519177 PCGF6Q9BYE7 350 aa29.82■■■□□ 2.36
SNTB1-203ENST00000519177 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
SNTB1-203ENST00000519177 CFTRP13569 1480 aa29.74■■■□□ 2.35
SNTB1-203ENST00000519177 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
SNTB1-203ENST00000519177 CSRNP3Q8WYN3 585 aa29.73■■■□□ 2.35
SNTB1-203ENST00000519177 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
SNTB1-203ENST00000519177 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
SNTB1-203ENST00000519177 TRIM26Q12899 539 aaPredicted RBP29.66■■■□□ 2.34
SNTB1-203ENST00000519177 TNIKQ9UKE5 1360 aa29.59■■■□□ 2.33
SNTB1-203ENST00000519177 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
SNTB1-203ENST00000519177 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
SNTB1-203ENST00000519177 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
SNTB1-203ENST00000519177 KIF21BO75037 1637 aa29.51■■■□□ 2.31
SNTB1-203ENST00000519177 CUX1P39880 1505 aa29.5■■■□□ 2.31
SNTB1-203ENST00000519177 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
SNTB1-203ENST00000519177 HRCP23327 699 aa29.48■■■□□ 2.31
SNTB1-203ENST00000519177 CEP162Q5TB80 1403 aa29.47■■■□□ 2.31
SNTB1-203ENST00000519177 UBTFP17480 764 aaKnown RBP29.39■■■□□ 2.3
SNTB1-203ENST00000519177 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
SNTB1-203ENST00000519177 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
SNTB1-203ENST00000519177 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
SNTB1-203ENST00000519177 PRXQ9BXM0 1461 aa29.19■■■□□ 2.26
SNTB1-203ENST00000519177 FANCD2Q9BXW9 1451 aa29.19■■■□□ 2.26
SNTB1-203ENST00000519177 CLIP1P30622 1438 aa29.1■■■□□ 2.25
SNTB1-203ENST00000519177 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
SNTB1-203ENST00000519177 PPARGC1BQ86YN6 1023 aaKnown RBP29.08■■■□□ 2.25
SNTB1-203ENST00000519177 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
SNTB1-203ENST00000519177 NESP48681 1621 aa29.06■■■□□ 2.24
SNTB1-203ENST00000519177 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
SNTB1-203ENST00000519177 CUX2O14529 1486 aa29.01■■■□□ 2.23
SNTB1-203ENST00000519177 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
SNTB1-203ENST00000519177 VPS8Q8N3P4 1428 aa28.94■■■□□ 2.22
SNTB1-203ENST00000519177 IGF1RP08069 1367 aa28.92■■■□□ 2.22
SNTB1-203ENST00000519177 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
SNTB1-203ENST00000519177 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
SNTB1-203ENST00000519177 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
SNTB1-203ENST00000519177 ABCA10Q8WWZ4 1543 aa28.83■■■□□ 2.21
SNTB1-203ENST00000519177 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
SNTB1-203ENST00000519177 ZEB1P37275 1124 aaPredicted RBP28.79■■■□□ 2.2
SNTB1-203ENST00000519177 CARMIL1Q5VZK9 1371 aa28.78■■■□□ 2.2
SNTB1-203ENST00000519177 RAD54L2Q9Y4B4 1467 aa28.77■■■□□ 2.2
SNTB1-203ENST00000519177 ARAP1Q96P48 1450 aa28.75■■■□□ 2.19
SNTB1-203ENST00000519177 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
SNTB1-203ENST00000519177 TTBK1Q5TCY1 1321 aaPredicted RBP28.71■■■□□ 2.19
SNTB1-203ENST00000519177 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
SNTB1-203ENST00000519177 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
SNTB1-203ENST00000519177 APLP2Q06481 763 aa28.66■■■□□ 2.18
SNTB1-203ENST00000519177 ARHGAP35Q9NRY4 1499 aa28.63■■■□□ 2.17
SNTB1-203ENST00000519177 CUL7Q14999 1698 aa28.6■■■□□ 2.17
SNTB1-203ENST00000519177 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
SNTB1-203ENST00000519177 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
SNTB1-203ENST00000519177 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.15
SNTB1-203ENST00000519177 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
SNTB1-203ENST00000519177 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
SNTB1-203ENST00000519177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.41■■■□□ 2.14
SNTB1-203ENST00000519177 CTTNBP2Q8WZ74 1663 aa28.37■■■□□ 2.13
SNTB1-203ENST00000519177 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
SNTB1-203ENST00000519177 EFCAB5A4FU69 1503 aa28.33■■■□□ 2.13
SNTB1-203ENST00000519177 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
SNTB1-203ENST00000519177 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms