RNA–Protein interactions for RNA: ENST00000374706.5

CCNY-204, Transcript of cyclin Y, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNY, Length 3,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-204ENST00000374706 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
CCNY-204ENST00000374706 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
CCNY-204ENST00000374706 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
CCNY-204ENST00000374706 ABCC9O60706 1549 aa18.15■□□□□ 0.5
CCNY-204ENST00000374706 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
CCNY-204ENST00000374706 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
CCNY-204ENST00000374706 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
CCNY-204ENST00000374706 NACADO15069 1562 aa17.55■□□□□ 0.4
CCNY-204ENST00000374706 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
CCNY-204ENST00000374706 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
CCNY-204ENST00000374706 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
CCNY-204ENST00000374706 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
CCNY-204ENST00000374706 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCNY-204ENST00000374706 HRCP23327 699 aa16.98■□□□□ 0.31
CCNY-204ENST00000374706 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
CCNY-204ENST00000374706 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.27
CCNY-204ENST00000374706 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
CCNY-204ENST00000374706 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
CCNY-204ENST00000374706 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
CCNY-204ENST00000374706 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
CCNY-204ENST00000374706 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
CCNY-204ENST00000374706 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
CCNY-204ENST00000374706 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.25
CCNY-204ENST00000374706 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
CCNY-204ENST00000374706 WIZO95785 1651 aa16.45■□□□□ 0.22
CCNY-204ENST00000374706 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
CCNY-204ENST00000374706 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
CCNY-204ENST00000374706 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
CCNY-204ENST00000374706 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
CCNY-204ENST00000374706 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
CCNY-204ENST00000374706 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
CCNY-204ENST00000374706 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
CCNY-204ENST00000374706 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
CCNY-204ENST00000374706 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
CCNY-204ENST00000374706 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
CCNY-204ENST00000374706 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
CCNY-204ENST00000374706 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.18
CCNY-204ENST00000374706 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
CCNY-204ENST00000374706 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
CCNY-204ENST00000374706 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
CCNY-204ENST00000374706 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
CCNY-204ENST00000374706 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
CCNY-204ENST00000374706 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
CCNY-204ENST00000374706 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
CCNY-204ENST00000374706 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
CCNY-204ENST00000374706 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
CCNY-204ENST00000374706 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
CCNY-204ENST00000374706 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
CCNY-204ENST00000374706 CFTRP13569 1480 aa15.84■□□□□ 0.13
CCNY-204ENST00000374706 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
CCNY-204ENST00000374706 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
CCNY-204ENST00000374706 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.11
CCNY-204ENST00000374706 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
CCNY-204ENST00000374706 NESP48681 1621 aa15.75■□□□□ 0.11
CCNY-204ENST00000374706 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
CCNY-204ENST00000374706 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
CCNY-204ENST00000374706 EEA1Q15075 1411 aa15.69■□□□□ 0.1
CCNY-204ENST00000374706 MYT1Q01538 1121 aa15.68■□□□□ 0.1
CCNY-204ENST00000374706 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
CCNY-204ENST00000374706 SOGA1O94964 1423 aa15.66■□□□□ 0.1
CCNY-204ENST00000374706 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
CCNY-204ENST00000374706 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
CCNY-204ENST00000374706 NEUROD1Q13562 356 aa15.62■□□□□ 0.09
CCNY-204ENST00000374706 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
CCNY-204ENST00000374706 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
CCNY-204ENST00000374706 CCER1Q8TC90 406 aaPredicted RBP15.6■□□□□ 0.09
CCNY-204ENST00000374706 GTF3C3Q9Y5Q9 886 aa15.59■□□□□ 0.09
CCNY-204ENST00000374706 APLP2Q06481 763 aa15.58■□□□□ 0.09
CCNY-204ENST00000374706 CUX2O14529 1486 aa15.58■□□□□ 0.08
CCNY-204ENST00000374706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
CCNY-204ENST00000374706 CUX1P39880 1505 aa15.55■□□□□ 0.08
CCNY-204ENST00000374706 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
CCNY-204ENST00000374706 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
CCNY-204ENST00000374706 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
CCNY-204ENST00000374706 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
CCNY-204ENST00000374706 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
CCNY-204ENST00000374706 FBLN2P98095 1184 aa15.49■□□□□ 0.07
CCNY-204ENST00000374706 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
CCNY-204ENST00000374706 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
CCNY-204ENST00000374706 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
CCNY-204ENST00000374706 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
CCNY-204ENST00000374706 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
CCNY-204ENST00000374706 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
CCNY-204ENST00000374706 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
CCNY-204ENST00000374706 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
CCNY-204ENST00000374706 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
CCNY-204ENST00000374706 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
CCNY-204ENST00000374706 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
CCNY-204ENST00000374706 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
CCNY-204ENST00000374706 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
CCNY-204ENST00000374706 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
CCNY-204ENST00000374706 IGF1RP08069 1367 aa15.34■□□□□ 0.05
CCNY-204ENST00000374706 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
CCNY-204ENST00000374706 YTHDC1Q96MU7 727 aaKnown RBP15.34■□□□□ 0.05
CCNY-204ENST00000374706 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
CCNY-204ENST00000374706 CLIP1P30622 1438 aa15.33■□□□□ 0.04
CCNY-204ENST00000374706 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
CCNY-204ENST00000374706 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
CCNY-204ENST00000374706 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
CCNY-204ENST00000374706 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms