RNA–Protein interactions for RNA: ENST00000263834.9

GREB1-202, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 2,448 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-202ENST00000263834 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
GREB1-202ENST00000263834 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
GREB1-202ENST00000263834 ABCC9O60706 1549 aa20.25■□□□□ 0.83
GREB1-202ENST00000263834 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
GREB1-202ENST00000263834 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
GREB1-202ENST00000263834 NACADO15069 1562 aa19.51■□□□□ 0.71
GREB1-202ENST00000263834 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
GREB1-202ENST00000263834 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
GREB1-202ENST00000263834 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.7
GREB1-202ENST00000263834 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
GREB1-202ENST00000263834 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
GREB1-202ENST00000263834 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
GREB1-202ENST00000263834 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
GREB1-202ENST00000263834 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
GREB1-202ENST00000263834 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
GREB1-202ENST00000263834 EIF4G1Q04637 1599 aaKnown RBP18.4■□□□□ 0.54
GREB1-202ENST00000263834 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
GREB1-202ENST00000263834 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
GREB1-202ENST00000263834 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
GREB1-202ENST00000263834 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
GREB1-202ENST00000263834 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
GREB1-202ENST00000263834 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
GREB1-202ENST00000263834 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
GREB1-202ENST00000263834 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
GREB1-202ENST00000263834 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
GREB1-202ENST00000263834 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
GREB1-202ENST00000263834 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
GREB1-202ENST00000263834 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
GREB1-202ENST00000263834 WIZO95785 1651 aa17.91■□□□□ 0.46
GREB1-202ENST00000263834 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
GREB1-202ENST00000263834 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
GREB1-202ENST00000263834 NESP48681 1621 aa17.55■□□□□ 0.4
GREB1-202ENST00000263834 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
GREB1-202ENST00000263834 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.4
GREB1-202ENST00000263834 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
GREB1-202ENST00000263834 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
GREB1-202ENST00000263834 CFTRP13569 1480 aa17.43■□□□□ 0.38
GREB1-202ENST00000263834 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
GREB1-202ENST00000263834 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.36
GREB1-202ENST00000263834 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
GREB1-202ENST00000263834 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
GREB1-202ENST00000263834 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
GREB1-202ENST00000263834 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
GREB1-202ENST00000263834 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
GREB1-202ENST00000263834 CUX2O14529 1486 aa17.17■□□□□ 0.34
GREB1-202ENST00000263834 WDR62O43379 1518 aa17.13■□□□□ 0.33
GREB1-202ENST00000263834 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
GREB1-202ENST00000263834 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
GREB1-202ENST00000263834 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
GREB1-202ENST00000263834 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
GREB1-202ENST00000263834 CUX1P39880 1505 aa16.97■□□□□ 0.31
GREB1-202ENST00000263834 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
GREB1-202ENST00000263834 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
GREB1-202ENST00000263834 FGD5Q6ZNL6 1462 aa16.9■□□□□ 0.3
GREB1-202ENST00000263834 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
GREB1-202ENST00000263834 SOGA1O94964 1423 aa16.87■□□□□ 0.29
GREB1-202ENST00000263834 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
GREB1-202ENST00000263834 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
GREB1-202ENST00000263834 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
GREB1-202ENST00000263834 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
GREB1-202ENST00000263834 BIVM-ERCC5R4GMW8 1640 aa16.83■□□□□ 0.28
GREB1-202ENST00000263834 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
GREB1-202ENST00000263834 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
GREB1-202ENST00000263834 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
GREB1-202ENST00000263834 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.275e-7■■■■□ 24.5
GREB1-202ENST00000263834 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
GREB1-202ENST00000263834 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
GREB1-202ENST00000263834 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
GREB1-202ENST00000263834 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
GREB1-202ENST00000263834 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
GREB1-202ENST00000263834 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
GREB1-202ENST00000263834 HRCP23327 699 aa16.67■□□□□ 0.26
GREB1-202ENST00000263834 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
GREB1-202ENST00000263834 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
GREB1-202ENST00000263834 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
GREB1-202ENST00000263834 FBLN2P98095 1184 aa16.6■□□□□ 0.25
GREB1-202ENST00000263834 MYT1Q01538 1121 aa16.6■□□□□ 0.25
GREB1-202ENST00000263834 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
GREB1-202ENST00000263834 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
GREB1-202ENST00000263834 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
GREB1-202ENST00000263834 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
GREB1-202ENST00000263834 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
GREB1-202ENST00000263834 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
GREB1-202ENST00000263834 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
GREB1-202ENST00000263834 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
GREB1-202ENST00000263834 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
GREB1-202ENST00000263834 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
GREB1-202ENST00000263834 CHD1O14646 1710 aa16.5■□□□□ 0.23
GREB1-202ENST00000263834 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
GREB1-202ENST00000263834 IGF1RP08069 1367 aa16.49■□□□□ 0.23
GREB1-202ENST00000263834 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
GREB1-202ENST00000263834 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
GREB1-202ENST00000263834 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
GREB1-202ENST00000263834 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
GREB1-202ENST00000263834 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
GREB1-202ENST00000263834 CUL7Q14999 1698 aa16.4■□□□□ 0.22
GREB1-202ENST00000263834 FAM9AQ8IZU1 332 aaPredicted RBP16.39■□□□□ 0.21
GREB1-202ENST00000263834 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
GREB1-202ENST00000263834 EEA1Q15075 1411 aa16.35■□□□□ 0.21
GREB1-202ENST00000263834 NUP160Q12769 1436 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms