RNA–Protein interactions for RNA: ENST00000492478.5

CCNY-208, Transcript of cyclin Y, humanhuman

TSL 5

Gene CCNY, Length 809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-208ENST00000492478 NISCHQ9Y2I1 1504 aa21.07■□□□□ 0.96
CCNY-208ENST00000492478 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
CCNY-208ENST00000492478 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
CCNY-208ENST00000492478 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
CCNY-208ENST00000492478 ABCC9O60706 1549 aa17.87■□□□□ 0.45
CCNY-208ENST00000492478 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
CCNY-208ENST00000492478 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
CCNY-208ENST00000492478 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
CCNY-208ENST00000492478 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
CCNY-208ENST00000492478 NACADO15069 1562 aa17.36■□□□□ 0.37
CCNY-208ENST00000492478 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
CCNY-208ENST00000492478 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
CCNY-208ENST00000492478 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
CCNY-208ENST00000492478 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CCNY-208ENST00000492478 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
CCNY-208ENST00000492478 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
CCNY-208ENST00000492478 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
CCNY-208ENST00000492478 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCNY-208ENST00000492478 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
CCNY-208ENST00000492478 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
CCNY-208ENST00000492478 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
CCNY-208ENST00000492478 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
CCNY-208ENST00000492478 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
CCNY-208ENST00000492478 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
CCNY-208ENST00000492478 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
CCNY-208ENST00000492478 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
CCNY-208ENST00000492478 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
CCNY-208ENST00000492478 WIZO95785 1651 aa16.11■□□□□ 0.17
CCNY-208ENST00000492478 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
CCNY-208ENST00000492478 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
CCNY-208ENST00000492478 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
CCNY-208ENST00000492478 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
CCNY-208ENST00000492478 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
CCNY-208ENST00000492478 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
CCNY-208ENST00000492478 HMGXB3Q12766 1538 aa15.96■□□□□ 0.15
CCNY-208ENST00000492478 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
CCNY-208ENST00000492478 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
CCNY-208ENST00000492478 FOXD1Q16676 465 aa15.71■□□□□ 0.11
CCNY-208ENST00000492478 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.08
CCNY-208ENST00000492478 CFTRP13569 1480 aa15.55■□□□□ 0.08
CCNY-208ENST00000492478 NESP48681 1621 aa15.54■□□□□ 0.08
CCNY-208ENST00000492478 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
CCNY-208ENST00000492478 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
CCNY-208ENST00000492478 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
CCNY-208ENST00000492478 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
CCNY-208ENST00000492478 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
CCNY-208ENST00000492478 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
CCNY-208ENST00000492478 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.05
CCNY-208ENST00000492478 CUX2O14529 1486 aa15.32■□□□□ 0.04
CCNY-208ENST00000492478 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
CCNY-208ENST00000492478 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
CCNY-208ENST00000492478 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
CCNY-208ENST00000492478 URB2Q14146 1524 aaKnown RBP15.23■□□□□ 0.03
CCNY-208ENST00000492478 CUX1P39880 1505 aa15.22■□□□□ 0.03
CCNY-208ENST00000492478 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
CCNY-208ENST00000492478 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
CCNY-208ENST00000492478 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
CCNY-208ENST00000492478 ADRA2BP18089 450 aa15.2■□□□□ 0.02
CCNY-208ENST00000492478 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
CCNY-208ENST00000492478 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
CCNY-208ENST00000492478 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
CCNY-208ENST00000492478 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
CCNY-208ENST00000492478 WDR62O43379 1518 aa15.17■□□□□ 0.02
CCNY-208ENST00000492478 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CCNY-208ENST00000492478 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
CCNY-208ENST00000492478 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
CCNY-208ENST00000492478 SOGA1O94964 1423 aa15.04■□□□□ -0
CCNY-208ENST00000492478 KCNA4P22459 653 aa15.04■□□□□ -0
CCNY-208ENST00000492478 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
CCNY-208ENST00000492478 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
CCNY-208ENST00000492478 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
CCNY-208ENST00000492478 IFT140Q96RY7 1462 aa15□□□□□ -0.01
CCNY-208ENST00000492478 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
CCNY-208ENST00000492478 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
CCNY-208ENST00000492478 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
CCNY-208ENST00000492478 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
CCNY-208ENST00000492478 TDRD9Q8NDG6 1382 aaKnown RBP14.92□□□□□ -0.02
CCNY-208ENST00000492478 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
CCNY-208ENST00000492478 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
CCNY-208ENST00000492478 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
CCNY-208ENST00000492478 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
CCNY-208ENST00000492478 FAM9AQ8IZU1 332 aaPredicted RBP14.89□□□□□ -0.03
CCNY-208ENST00000492478 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.038e-7■■■■■ 33.9
CCNY-208ENST00000492478 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
CCNY-208ENST00000492478 EEA1Q15075 1411 aa14.87□□□□□ -0.03
CCNY-208ENST00000492478 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
CCNY-208ENST00000492478 PBRM1Q86U86 1689 aa14.83□□□□□ -0.04
CCNY-208ENST00000492478 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
CCNY-208ENST00000492478 IGF1RP08069 1367 aa14.82□□□□□ -0.04
CCNY-208ENST00000492478 GRIN2BQ13224 1484 aa14.81□□□□□ -0.04
CCNY-208ENST00000492478 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
CCNY-208ENST00000492478 MSH5O43196 834 aa14.79□□□□□ -0.04
CCNY-208ENST00000492478 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
CCNY-208ENST00000492478 CUL7Q14999 1698 aa14.74□□□□□ -0.05
CCNY-208ENST00000492478 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
CCNY-208ENST00000492478 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
CCNY-208ENST00000492478 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
CCNY-208ENST00000492478 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
CCNY-208ENST00000492478 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
CCNY-208ENST00000492478 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms