RNA–Protein interactions for RNA: ENST00000381486.6

GREB1-204, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GREB1, Length 8,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-204ENST00000381486 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
GREB1-204ENST00000381486 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
GREB1-204ENST00000381486 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
GREB1-204ENST00000381486 APLP2Q06481 763 aa18.38■□□□□ 0.53
GREB1-204ENST00000381486 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
GREB1-204ENST00000381486 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
GREB1-204ENST00000381486 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
GREB1-204ENST00000381486 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
GREB1-204ENST00000381486 MYT1Q01538 1121 aa18.2■□□□□ 0.5
GREB1-204ENST00000381486 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
GREB1-204ENST00000381486 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
GREB1-204ENST00000381486 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
GREB1-204ENST00000381486 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
GREB1-204ENST00000381486 NEFLP07196 543 aa17.8■□□□□ 0.44
GREB1-204ENST00000381486 PCGF6Q9BYE7 350 aa17.78■□□□□ 0.44
GREB1-204ENST00000381486 YTHDC1Q96MU7 727 aaKnown RBP17.57■□□□□ 0.4
GREB1-204ENST00000381486 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
GREB1-204ENST00000381486 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
GREB1-204ENST00000381486 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
GREB1-204ENST00000381486 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
GREB1-204ENST00000381486 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
GREB1-204ENST00000381486 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
GREB1-204ENST00000381486 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
GREB1-204ENST00000381486 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
GREB1-204ENST00000381486 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.31
GREB1-204ENST00000381486 HRCP23327 699 aa16.88■□□□□ 0.29
GREB1-204ENST00000381486 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
GREB1-204ENST00000381486 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
GREB1-204ENST00000381486 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
GREB1-204ENST00000381486 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
GREB1-204ENST00000381486 ITGAEP38570 1179 aa16.71■□□□□ 0.27
GREB1-204ENST00000381486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
GREB1-204ENST00000381486 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
GREB1-204ENST00000381486 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
GREB1-204ENST00000381486 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
GREB1-204ENST00000381486 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
GREB1-204ENST00000381486 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
GREB1-204ENST00000381486 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
GREB1-204ENST00000381486 ANP32CO43423 234 aa16.43■□□□□ 0.22
GREB1-204ENST00000381486 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
GREB1-204ENST00000381486 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
GREB1-204ENST00000381486 ANP32BQ92688 251 aaKnown RBP16.37■□□□□ 0.21
GREB1-204ENST00000381486 FAM50AQ14320 339 aaKnown RBP16.35■□□□□ 0.21
GREB1-204ENST00000381486 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
GREB1-204ENST00000381486 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
GREB1-204ENST00000381486 NEFMP07197 916 aa16.32■□□□□ 0.2
GREB1-204ENST00000381486 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
GREB1-204ENST00000381486 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
GREB1-204ENST00000381486 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
GREB1-204ENST00000381486 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
GREB1-204ENST00000381486 BCANQ96GW7 911 aa16.22■□□□□ 0.19
GREB1-204ENST00000381486 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
GREB1-204ENST00000381486 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
GREB1-204ENST00000381486 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
GREB1-204ENST00000381486 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
GREB1-204ENST00000381486 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
GREB1-204ENST00000381486 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
GREB1-204ENST00000381486 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
GREB1-204ENST00000381486 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
GREB1-204ENST00000381486 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
GREB1-204ENST00000381486 CDK11BP21127 795 aaKnown RBP15.84■□□□□ 0.13
GREB1-204ENST00000381486 FKBP8Q14318 412 aa15.84■□□□□ 0.13
GREB1-204ENST00000381486 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
GREB1-204ENST00000381486 ANP32EQ9BTT0 268 aa15.82■□□□□ 0.12
GREB1-204ENST00000381486 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
GREB1-204ENST00000381486 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
GREB1-204ENST00000381486 HNRNPUQ00839 825 aaKnown RBP eCLIP15.77■□□□□ 0.119e-8■■□□□ 13.2
GREB1-204ENST00000381486 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
GREB1-204ENST00000381486 NBR1Q14596 966 aa15.73■□□□□ 0.11
GREB1-204ENST00000381486 FBLN2P98095 1184 aa15.73■□□□□ 0.11
GREB1-204ENST00000381486 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
GREB1-204ENST00000381486 BECN1Q14457 450 aa15.72■□□□□ 0.11
GREB1-204ENST00000381486 TRIM44Q96DX7 344 aaPredicted RBP15.72■□□□□ 0.11
GREB1-204ENST00000381486 TMC1Q8TDI8 760 aa15.72■□□□□ 0.11
GREB1-204ENST00000381486 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
GREB1-204ENST00000381486 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
GREB1-204ENST00000381486 NCLP19338 710 aaKnown RBP15.67■□□□□ 0.1
GREB1-204ENST00000381486 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
GREB1-204ENST00000381486 GOLGA6L22H0YM25 854 aa15.66■□□□□ 0.1
GREB1-204ENST00000381486 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
GREB1-204ENST00000381486 DCAF1Q9Y4B6 1507 aa15.65■□□□□ 0.1
GREB1-204ENST00000381486 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
GREB1-204ENST00000381486 ARXQ96QS3 562 aa15.61■□□□□ 0.09
GREB1-204ENST00000381486 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
GREB1-204ENST00000381486 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
GREB1-204ENST00000381486 ZRSR1Q15695 479 aaKnown RBP15.57■□□□□ 0.08
GREB1-204ENST00000381486 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
GREB1-204ENST00000381486 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
GREB1-204ENST00000381486 ABCC9O60706 1549 aa15.54■□□□□ 0.08
GREB1-204ENST00000381486 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
GREB1-204ENST00000381486 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.07
GREB1-204ENST00000381486 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
GREB1-204ENST00000381486 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
GREB1-204ENST00000381486 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■□□□ 12.1
GREB1-204ENST00000381486 PTMAP06454 111 aaKnown RBP15.49■□□□□ 0.07
GREB1-204ENST00000381486 DNTTIP2Q5QJE6 756 aaKnown RBP15.48■□□□□ 0.07
GREB1-204ENST00000381486 ARID3CA6NKF2 412 aa15.46■□□□□ 0.07
GREB1-204ENST00000381486 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
GREB1-204ENST00000381486 GOLGA6L6A8MZA4 724 aa15.44■□□□□ 0.06
GREB1-204ENST00000381486 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms