RNA–Protein interactions for RNA: ENST00000349213.7

ARID4B-202, Transcript of AT-rich interaction domain 4B, humanhuman

TSL 1 (best) BASIC

Gene ARID4B, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4B-202ENST00000349213 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
ARID4B-202ENST00000349213 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
ARID4B-202ENST00000349213 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
ARID4B-202ENST00000349213 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
ARID4B-202ENST00000349213 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
ARID4B-202ENST00000349213 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
ARID4B-202ENST00000349213 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
ARID4B-202ENST00000349213 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
ARID4B-202ENST00000349213 APLP2Q06481 763 aa24.32■■□□□ 1.48
ARID4B-202ENST00000349213 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
ARID4B-202ENST00000349213 MYT1Q01538 1121 aa24.25■■□□□ 1.47
ARID4B-202ENST00000349213 ERICH6Q7L0X2 663 aa24.13■■□□□ 1.45
ARID4B-202ENST00000349213 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
ARID4B-202ENST00000349213 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
ARID4B-202ENST00000349213 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
ARID4B-202ENST00000349213 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
ARID4B-202ENST00000349213 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
ARID4B-202ENST00000349213 NEFLP07196 543 aa23.63■■□□□ 1.37
ARID4B-202ENST00000349213 HRCP23327 699 aa23.62■■□□□ 1.37
ARID4B-202ENST00000349213 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
ARID4B-202ENST00000349213 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
ARID4B-202ENST00000349213 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
ARID4B-202ENST00000349213 UBTFP17480 764 aaKnown RBP23.33■■□□□ 1.33
ARID4B-202ENST00000349213 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
ARID4B-202ENST00000349213 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
ARID4B-202ENST00000349213 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
ARID4B-202ENST00000349213 DAXXQ9UER7 740 aaPredicted RBP22.89■■□□□ 1.26
ARID4B-202ENST00000349213 DIEXFQ68CQ4 756 aaKnown RBP22.82■■□□□ 1.24
ARID4B-202ENST00000349213 MYT1LQ9UL68 1186 aa22.76■■□□□ 1.23
ARID4B-202ENST00000349213 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.23
ARID4B-202ENST00000349213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
ARID4B-202ENST00000349213 ITGAEP38570 1179 aa22.67■■□□□ 1.22
ARID4B-202ENST00000349213 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
ARID4B-202ENST00000349213 GTF3C3Q9Y5Q9 886 aa22.61■■□□□ 1.21
ARID4B-202ENST00000349213 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
ARID4B-202ENST00000349213 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
ARID4B-202ENST00000349213 CNGB1Q14028 1251 aaPredicted RBP22.36■■□□□ 1.17
ARID4B-202ENST00000349213 BCANQ96GW7 911 aa22.33■■□□□ 1.17
ARID4B-202ENST00000349213 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
ARID4B-202ENST00000349213 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
ARID4B-202ENST00000349213 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
ARID4B-202ENST00000349213 ANP32CO43423 234 aa22.12■■□□□ 1.13
ARID4B-202ENST00000349213 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
ARID4B-202ENST00000349213 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
ARID4B-202ENST00000349213 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
ARID4B-202ENST00000349213 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
ARID4B-202ENST00000349213 ABCC9O60706 1549 aa21.99■■□□□ 1.11
ARID4B-202ENST00000349213 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
ARID4B-202ENST00000349213 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
ARID4B-202ENST00000349213 FBLN2P98095 1184 aa21.81■■□□□ 1.08
ARID4B-202ENST00000349213 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
ARID4B-202ENST00000349213 FKBP8Q14318 412 aa21.74■■□□□ 1.07
ARID4B-202ENST00000349213 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
ARID4B-202ENST00000349213 ZNF326Q5BKZ1 582 aaKnown RBP21.69■■□□□ 1.06
ARID4B-202ENST00000349213 NPM2Q86SE8 214 aaKnown RBP21.65■■□□□ 1.06
ARID4B-202ENST00000349213 EIF5BO60841 1220 aaKnown RBP21.63■■□□□ 1.05
ARID4B-202ENST00000349213 ZBTB47Q9UFB7 747 aaPredicted RBP21.63■■□□□ 1.05
ARID4B-202ENST00000349213 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
ARID4B-202ENST00000349213 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
ARID4B-202ENST00000349213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
ARID4B-202ENST00000349213 GLIPR1L2Q4G1C9 344 aa21.45■■□□□ 1.02
ARID4B-202ENST00000349213 NBR1Q14596 966 aa21.41■■□□□ 1.02
ARID4B-202ENST00000349213 ANP32BQ92688 251 aaKnown RBP21.41■■□□□ 1.02
ARID4B-202ENST00000349213 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
ARID4B-202ENST00000349213 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
ARID4B-202ENST00000349213 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
ARID4B-202ENST00000349213 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
ARID4B-202ENST00000349213 MIER1Q8N108 512 aa21.35■■□□□ 1.01
ARID4B-202ENST00000349213 BCL11AQ9H165 835 aa21.34■■□□□ 1.01
ARID4B-202ENST00000349213 P3H3Q8IVL6 736 aa21.32■■□□□ 1
ARID4B-202ENST00000349213 FAM9BQ8IZU0 186 aa21.32■■□□□ 1
ARID4B-202ENST00000349213 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
ARID4B-202ENST00000349213 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
ARID4B-202ENST00000349213 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
ARID4B-202ENST00000349213 NEFMP07197 916 aa21.29■■□□□ 1
ARID4B-202ENST00000349213 ZNF777Q9ULD5 760 aaPredicted RBP21.27■■□□□ 1
ARID4B-202ENST00000349213 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
ARID4B-202ENST00000349213 ANP32EQ9BTT0 268 aa21.24■□□□□ 0.99
ARID4B-202ENST00000349213 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
ARID4B-202ENST00000349213 IRX6P78412 446 aaPredicted RBP21.13■□□□□ 0.97
ARID4B-202ENST00000349213 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
ARID4B-202ENST00000349213 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
ARID4B-202ENST00000349213 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
ARID4B-202ENST00000349213 MRS2Q9HD23 443 aa21.11■□□□□ 0.97
ARID4B-202ENST00000349213 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.1■□□□□ 0.97
ARID4B-202ENST00000349213 SALL2Q9Y467 1007 aaPredicted RBP21.1■□□□□ 0.97
ARID4B-202ENST00000349213 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
ARID4B-202ENST00000349213 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
ARID4B-202ENST00000349213 ARXQ96QS3 562 aa21.06■□□□□ 0.96
ARID4B-202ENST00000349213 CHGAP10645 457 aaKnown RBP21.05■□□□□ 0.96
ARID4B-202ENST00000349213 DDRGK1Q96HY6 314 aa21.02■□□□□ 0.96
ARID4B-202ENST00000349213 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
ARID4B-202ENST00000349213 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
ARID4B-202ENST00000349213 WDR43Q15061 677 aaKnown RBP eCLIP20.93■□□□□ 0.949e-6■■■□□ 15.6
ARID4B-202ENST00000349213 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
ARID4B-202ENST00000349213 BECN1Q14457 450 aa20.89■□□□□ 0.93
ARID4B-202ENST00000349213 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
ARID4B-202ENST00000349213 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
ARID4B-202ENST00000349213 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
ARID4B-202ENST00000349213 CLIP1P30622 1438 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms