RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
SREBF1-205ENST00000395757 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
SREBF1-205ENST00000395757 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
SREBF1-205ENST00000395757 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
SREBF1-205ENST00000395757 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
SREBF1-205ENST00000395757 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
SREBF1-205ENST00000395757 FAM9AQ8IZU1 332 aaPredicted RBP23.8■■□□□ 1.4
SREBF1-205ENST00000395757 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
SREBF1-205ENST00000395757 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
SREBF1-205ENST00000395757 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
SREBF1-205ENST00000395757 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
SREBF1-205ENST00000395757 ABCC9O60706 1549 aa23.38■■□□□ 1.33
SREBF1-205ENST00000395757 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
SREBF1-205ENST00000395757 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
SREBF1-205ENST00000395757 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
SREBF1-205ENST00000395757 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
SREBF1-205ENST00000395757 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
SREBF1-205ENST00000395757 HRCP23327 699 aa23.02■■□□□ 1.28
SREBF1-205ENST00000395757 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
SREBF1-205ENST00000395757 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-205ENST00000395757 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-205ENST00000395757 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-205ENST00000395757 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.21
SREBF1-205ENST00000395757 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
SREBF1-205ENST00000395757 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
SREBF1-205ENST00000395757 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
SREBF1-205ENST00000395757 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
SREBF1-205ENST00000395757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.18
SREBF1-205ENST00000395757 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
SREBF1-205ENST00000395757 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
SREBF1-205ENST00000395757 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
SREBF1-205ENST00000395757 NACADO15069 1562 aa22.1■■□□□ 1.13
SREBF1-205ENST00000395757 WIZO95785 1651 aa22.1■■□□□ 1.13
SREBF1-205ENST00000395757 APLP2Q06481 763 aa22.09■■□□□ 1.13
SREBF1-205ENST00000395757 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-205ENST00000395757 MYT1Q01538 1121 aa22■■□□□ 1.11
SREBF1-205ENST00000395757 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.11
SREBF1-205ENST00000395757 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
SREBF1-205ENST00000395757 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.1
SREBF1-205ENST00000395757 ITGAEP38570 1179 aa21.86■■□□□ 1.09
SREBF1-205ENST00000395757 SOGA1O94964 1423 aa21.84■■□□□ 1.09
SREBF1-205ENST00000395757 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
SREBF1-205ENST00000395757 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
SREBF1-205ENST00000395757 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-205ENST00000395757 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
SREBF1-205ENST00000395757 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
SREBF1-205ENST00000395757 DIEXFQ68CQ4 756 aaKnown RBP21.62■■□□□ 1.05
SREBF1-205ENST00000395757 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
SREBF1-205ENST00000395757 P3H3Q8IVL6 736 aa21.54■■□□□ 1.04
SREBF1-205ENST00000395757 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
SREBF1-205ENST00000395757 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
SREBF1-205ENST00000395757 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
SREBF1-205ENST00000395757 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
SREBF1-205ENST00000395757 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
SREBF1-205ENST00000395757 CLIP1P30622 1438 aa21.38■■□□□ 1.01
SREBF1-205ENST00000395757 CENPBP07199 599 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-205ENST00000395757 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
SREBF1-205ENST00000395757 GOLGA3Q08378 1498 aa21.32■■□□□ 1
SREBF1-205ENST00000395757 NEUROD1Q13562 356 aa21.29■■□□□ 1
SREBF1-205ENST00000395757 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
SREBF1-205ENST00000395757 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-205ENST00000395757 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
SREBF1-205ENST00000395757 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
SREBF1-205ENST00000395757 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
SREBF1-205ENST00000395757 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
SREBF1-205ENST00000395757 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
SREBF1-205ENST00000395757 EEA1Q15075 1411 aa21.16■□□□□ 0.98
SREBF1-205ENST00000395757 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
SREBF1-205ENST00000395757 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
SREBF1-205ENST00000395757 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.98
SREBF1-205ENST00000395757 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
SREBF1-205ENST00000395757 MIER1Q8N108 512 aa21.12■□□□□ 0.97
SREBF1-205ENST00000395757 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
SREBF1-205ENST00000395757 PRKCSHP14314 528 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-205ENST00000395757 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-205ENST00000395757 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
SREBF1-205ENST00000395757 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-205ENST00000395757 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
SREBF1-205ENST00000395757 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
SREBF1-205ENST00000395757 CUX2O14529 1486 aa20.9■□□□□ 0.94
SREBF1-205ENST00000395757 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.93
SREBF1-205ENST00000395757 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
SREBF1-205ENST00000395757 FBLN2P98095 1184 aa20.79■□□□□ 0.92
SREBF1-205ENST00000395757 CARMIL1Q5VZK9 1371 aa20.77■□□□□ 0.92
SREBF1-205ENST00000395757 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
SREBF1-205ENST00000395757 BCANQ96GW7 911 aa20.76■□□□□ 0.91
SREBF1-205ENST00000395757 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
SREBF1-205ENST00000395757 TRIM52Q96A61 297 aa20.75■□□□□ 0.91
SREBF1-205ENST00000395757 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
SREBF1-205ENST00000395757 KIF21BO75037 1637 aa20.72■□□□□ 0.91
SREBF1-205ENST00000395757 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
SREBF1-205ENST00000395757 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
SREBF1-205ENST00000395757 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
SREBF1-205ENST00000395757 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
SREBF1-205ENST00000395757 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
SREBF1-205ENST00000395757 CUX1P39880 1505 aa20.65■□□□□ 0.9
SREBF1-205ENST00000395757 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
SREBF1-205ENST00000395757 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
SREBF1-205ENST00000395757 IGF1RP08069 1367 aa20.62■□□□□ 0.89
SREBF1-205ENST00000395757 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms