RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 NISCHQ9Y2I1 1504 aa33.47■■■□□ 2.95
SNTB1-201ENST00000395601 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
SNTB1-201ENST00000395601 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
SNTB1-201ENST00000395601 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
SNTB1-201ENST00000395601 ABCC9O60706 1549 aa29.06■■■□□ 2.24
SNTB1-201ENST00000395601 EHMT2Q96KQ7 1210 aa28.82■■■□□ 2.2
SNTB1-201ENST00000395601 FAM9AQ8IZU1 332 aaPredicted RBP28.44■■■□□ 2.14
SNTB1-201ENST00000395601 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.13
SNTB1-201ENST00000395601 TRIM41Q8WV44 630 aa28.25■■■□□ 2.11
SNTB1-201ENST00000395601 APLP2Q06481 763 aa28.14■■■□□ 2.09
SNTB1-201ENST00000395601 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
SNTB1-201ENST00000395601 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
SNTB1-201ENST00000395601 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
SNTB1-201ENST00000395601 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
SNTB1-201ENST00000395601 ATP1B4Q9UN42 357 aaPredicted RBP27.64■■■□□ 2.02
SNTB1-201ENST00000395601 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
SNTB1-201ENST00000395601 SCRIBQ14160 1630 aa27.54■■■□□ 2
SNTB1-201ENST00000395601 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
SNTB1-201ENST00000395601 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
SNTB1-201ENST00000395601 NACADO15069 1562 aa27.16■■□□□ 1.94
SNTB1-201ENST00000395601 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
SNTB1-201ENST00000395601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
SNTB1-201ENST00000395601 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
SNTB1-201ENST00000395601 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
SNTB1-201ENST00000395601 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
SNTB1-201ENST00000395601 FBLN2P98095 1184 aa26.77■■□□□ 1.88
SNTB1-201ENST00000395601 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
SNTB1-201ENST00000395601 MYT1LQ9UL68 1186 aa26.66■■□□□ 1.86
SNTB1-201ENST00000395601 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
SNTB1-201ENST00000395601 ITGAEP38570 1179 aa26.52■■□□□ 1.84
SNTB1-201ENST00000395601 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
SNTB1-201ENST00000395601 CSRNP3Q8WYN3 585 aa26.39■■□□□ 1.81
SNTB1-201ENST00000395601 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
SNTB1-201ENST00000395601 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
SNTB1-201ENST00000395601 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
SNTB1-201ENST00000395601 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
SNTB1-201ENST00000395601 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
SNTB1-201ENST00000395601 P3H3Q8IVL6 736 aa26.22■■□□□ 1.79
SNTB1-201ENST00000395601 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
SNTB1-201ENST00000395601 FAM50AQ14320 339 aaKnown RBP26.12■■□□□ 1.77
SNTB1-201ENST00000395601 ARID3CA6NKF2 412 aa26.07■■□□□ 1.76
SNTB1-201ENST00000395601 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
SNTB1-201ENST00000395601 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
SNTB1-201ENST00000395601 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
SNTB1-201ENST00000395601 CDK11AQ9UQ88 783 aaPredicted RBP25.86■■□□□ 1.73
SNTB1-201ENST00000395601 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
SNTB1-201ENST00000395601 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SNTB1-201ENST00000395601 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
SNTB1-201ENST00000395601 TRIM52Q96A61 297 aa25.82■■□□□ 1.72
SNTB1-201ENST00000395601 ZNF777Q9ULD5 760 aaPredicted RBP25.72■■□□□ 1.71
SNTB1-201ENST00000395601 POLR3GLQ9BT43 218 aa25.67■■□□□ 1.7
SNTB1-201ENST00000395601 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
SNTB1-201ENST00000395601 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
SNTB1-201ENST00000395601 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
SNTB1-201ENST00000395601 EEA1Q15075 1411 aa25.58■■□□□ 1.68
SNTB1-201ENST00000395601 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
SNTB1-201ENST00000395601 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
SNTB1-201ENST00000395601 WIZO95785 1651 aa25.49■■□□□ 1.67
SNTB1-201ENST00000395601 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
SNTB1-201ENST00000395601 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
SNTB1-201ENST00000395601 SMARCA4P51532 1647 aa25.45■■□□□ 1.67
SNTB1-201ENST00000395601 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
SNTB1-201ENST00000395601 CLIP1P30622 1438 aa25.43■■□□□ 1.66
SNTB1-201ENST00000395601 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
SNTB1-201ENST00000395601 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
SNTB1-201ENST00000395601 CUX2O14529 1486 aa25.37■■□□□ 1.65
SNTB1-201ENST00000395601 HRCP23327 699 aa25.36■■□□□ 1.65
SNTB1-201ENST00000395601 SLC4A1APQ9BWU0 796 aaKnown RBP25.36■■□□□ 1.65
SNTB1-201ENST00000395601 MTUS2Q5JR59 1369 aa25.34■■□□□ 1.65
SNTB1-201ENST00000395601 ESF1Q9H501 851 aaKnown RBP25.34■■□□□ 1.65
SNTB1-201ENST00000395601 CNGB1Q14028 1251 aaPredicted RBP25.32■■□□□ 1.64
SNTB1-201ENST00000395601 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
SNTB1-201ENST00000395601 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SNTB1-201ENST00000395601 KCNH8Q96L42 1107 aa25.28■■□□□ 1.64
SNTB1-201ENST00000395601 YTHDC1Q96MU7 727 aaKnown RBP25.27■■□□□ 1.64
SNTB1-201ENST00000395601 SOGA1O94964 1423 aa25.26■■□□□ 1.63
SNTB1-201ENST00000395601 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
SNTB1-201ENST00000395601 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
SNTB1-201ENST00000395601 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
SNTB1-201ENST00000395601 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
SNTB1-201ENST00000395601 BCANQ96GW7 911 aa25.2■■□□□ 1.62
SNTB1-201ENST00000395601 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
SNTB1-201ENST00000395601 CEP162Q5TB80 1403 aa25.19■■□□□ 1.62
SNTB1-201ENST00000395601 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
SNTB1-201ENST00000395601 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
SNTB1-201ENST00000395601 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
SNTB1-201ENST00000395601 TNIKQ9UKE5 1360 aa25.14■■□□□ 1.62
SNTB1-201ENST00000395601 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
SNTB1-201ENST00000395601 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
SNTB1-201ENST00000395601 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.61
SNTB1-201ENST00000395601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.61e-18■■■□□ 17.2
SNTB1-201ENST00000395601 STAG3Q9UJ98 1225 aa25.04■■□□□ 1.6
SNTB1-201ENST00000395601 CHGAP10645 457 aaKnown RBP25.04■■□□□ 1.6
SNTB1-201ENST00000395601 NEFLP07196 543 aa25.03■■□□□ 1.6
SNTB1-201ENST00000395601 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
SNTB1-201ENST00000395601 CARMIL2Q6F5E8 1435 aa24.88■■□□□ 1.57
SNTB1-201ENST00000395601 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
SNTB1-201ENST00000395601 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
SNTB1-201ENST00000395601 RRP7BPQ9NSQ0 103 aa24.86■■□□□ 1.57
SNTB1-201ENST00000395601 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms