RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.56
RUNX1-216ENST00000482318 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.54
RUNX1-216ENST00000482318 ZCCHC6Q5VYS8 1495 aaKnown RBP41.83■■■■■ 4.29
RUNX1-216ENST00000482318 DCAF1Q9Y4B6 1507 aa41.21■■■■■ 4.19
RUNX1-216ENST00000482318 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
RUNX1-216ENST00000482318 ABCC9O60706 1549 aa40.79■■■■■ 4.12
RUNX1-216ENST00000482318 MYO15BQ96JP2 1530 aa40.69■■■■■ 4.1
RUNX1-216ENST00000482318 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
RUNX1-216ENST00000482318 NACADO15069 1562 aa40.38■■■■■ 4.05
RUNX1-216ENST00000482318 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
RUNX1-216ENST00000482318 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
RUNX1-216ENST00000482318 UNC13AQ9UPW8 1703 aa39.2■■■■□ 3.87
RUNX1-216ENST00000482318 SUPT5HO00267 1087 aaKnown RBP39.11■■■■□ 3.85
RUNX1-216ENST00000482318 BICRAQ9NZM4 1560 aa38.71■■■■□ 3.79
RUNX1-216ENST00000482318 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
RUNX1-216ENST00000482318 CECR2Q9BXF3 1484 aa38.56■■■■□ 3.76
RUNX1-216ENST00000482318 BAZ1AQ9NRL2 1556 aaPredicted RBP38.46■■■■□ 3.75
RUNX1-216ENST00000482318 PABPN1Q86U42 306 aaKnown RBP eCLIP38.42■■■■□ 3.74
RUNX1-216ENST00000482318 MROH2BQ7Z745 1585 aa38.4■■■■□ 3.74
RUNX1-216ENST00000482318 SMARCA4P51532 1647 aa38.25■■■■□ 3.71
RUNX1-216ENST00000482318 WIZO95785 1651 aa38.12■■■■□ 3.69
RUNX1-216ENST00000482318 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
RUNX1-216ENST00000482318 TOP2AP11388 1531 aaKnown RBP37.78■■■■□ 3.64
RUNX1-216ENST00000482318 SMARCA2P51531 1590 aa37.6■■■■□ 3.61
RUNX1-216ENST00000482318 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
RUNX1-216ENST00000482318 ATAD2BQ9ULI0 1458 aa37.54■■■■□ 3.6
RUNX1-216ENST00000482318 CHIC1Q5VXU3 224 aa37.53■■■■□ 3.6
RUNX1-216ENST00000482318 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
RUNX1-216ENST00000482318 CCDC88BA6NC98 1476 aa37.33■■■■□ 3.57
RUNX1-216ENST00000482318 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
RUNX1-216ENST00000482318 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
RUNX1-216ENST00000482318 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
RUNX1-216ENST00000482318 TRIM41Q8WV44 630 aa36.82■■■■□ 3.49
RUNX1-216ENST00000482318 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
RUNX1-216ENST00000482318 CFTRP13569 1480 aa36.42■■■■□ 3.42
RUNX1-216ENST00000482318 PRDM2Q13029 1718 aa36.38■■■■□ 3.42
RUNX1-216ENST00000482318 WRNQ14191 1432 aaPredicted RBP eCLIP36.37■■■■□ 3.41
RUNX1-216ENST00000482318 CADPSQ9ULU8 1353 aa36.26■■■■□ 3.39
RUNX1-216ENST00000482318 SYNJ1O43426 1573 aa36.2■■■■□ 3.39
RUNX1-216ENST00000482318 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
RUNX1-216ENST00000482318 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
RUNX1-216ENST00000482318 FAM9AQ8IZU1 332 aaPredicted RBP36.07■■■■□ 3.36
RUNX1-216ENST00000482318 LOC105371045A0A1W2PR82 267 aa36.03■■■■□ 3.36
RUNX1-216ENST00000482318 EEA1Q15075 1411 aa36■■■■□ 3.35
RUNX1-216ENST00000482318 LAMC3Q9Y6N6 1575 aa35.99■■■■□ 3.35
RUNX1-216ENST00000482318 CUX1P39880 1505 aa35.91■■■■□ 3.34
RUNX1-216ENST00000482318 SOGA1O94964 1423 aa35.89■■■■□ 3.34
RUNX1-216ENST00000482318 FANCD2Q9BXW9 1451 aa35.87■■■■□ 3.33
RUNX1-216ENST00000482318 NESP48681 1621 aa35.83■■■■□ 3.33
RUNX1-216ENST00000482318 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
RUNX1-216ENST00000482318 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
RUNX1-216ENST00000482318 CSRNP3Q8WYN3 585 aa35.69■■■■□ 3.3
RUNX1-216ENST00000482318 PDS5BQ9NTI5 1447 aa35.67■■■■□ 3.3
RUNX1-216ENST00000482318 CEP164Q9UPV0 1460 aa35.66■■■■□ 3.3
RUNX1-216ENST00000482318 DNMBPQ6XZF7 1577 aa35.61■■■■□ 3.29
RUNX1-216ENST00000482318 FGD5Q6ZNL6 1462 aa35.51■■■■□ 3.28
RUNX1-216ENST00000482318 KIF21BO75037 1637 aa35.51■■■■□ 3.27
RUNX1-216ENST00000482318 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
RUNX1-216ENST00000482318 EHMT2Q96KQ7 1210 aa35.5■■■■□ 3.27
RUNX1-216ENST00000482318 TOPBP1Q92547 1522 aa35.5■■■■□ 3.27
RUNX1-216ENST00000482318 KIF27Q86VH2 1401 aa35.47■■■■□ 3.27
RUNX1-216ENST00000482318 GOLGA3Q08378 1498 aa35.47■■■■□ 3.27
RUNX1-216ENST00000482318 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.26
RUNX1-216ENST00000482318 TNIKQ9UKE5 1360 aa35.35■■■■□ 3.25
RUNX1-216ENST00000482318 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
RUNX1-216ENST00000482318 CUX2O14529 1486 aa35.31■■■■□ 3.24
RUNX1-216ENST00000482318 ERICH3Q5RHP9 1530 aa35.25■■■■□ 3.23
RUNX1-216ENST00000482318 UBTFP17480 764 aaKnown RBP35.23■■■■□ 3.23
RUNX1-216ENST00000482318 ABCA10Q8WWZ4 1543 aa35.23■■■■□ 3.23
RUNX1-216ENST00000482318 PRXQ9BXM0 1461 aa35.23■■■■□ 3.23
RUNX1-216ENST00000482318 MRC2Q9UBG0 1479 aa35.2■■■■□ 3.23
RUNX1-216ENST00000482318 RAPGEF2Q9Y4G8 1499 aa35.18■■■■□ 3.22
RUNX1-216ENST00000482318 CEP162Q5TB80 1403 aa35.16■■■■□ 3.22
RUNX1-216ENST00000482318 RAD54L2Q9Y4B4 1467 aa35.15■■■■□ 3.22
RUNX1-216ENST00000482318 WDR97A6NE52 1622 aa35.14■■■■□ 3.22
RUNX1-216ENST00000482318 IGF1RP08069 1367 aa35.06■■■■□ 3.2
RUNX1-216ENST00000482318 ERCC6Q03468 1493 aa35.02■■■■□ 3.2
RUNX1-216ENST00000482318 WDR62O43379 1518 aa35.01■■■■□ 3.2
RUNX1-216ENST00000482318 TARBP1Q13395 1621 aaKnown RBP34.97■■■■□ 3.19
RUNX1-216ENST00000482318 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.19
RUNX1-216ENST00000482318 CUL7Q14999 1698 aa34.93■■■■□ 3.18
RUNX1-216ENST00000482318 CARMIL1Q5VZK9 1371 aa34.92■■■■□ 3.18
RUNX1-216ENST00000482318 CLIP1P30622 1438 aa34.87■■■■□ 3.17
RUNX1-216ENST00000482318 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
RUNX1-216ENST00000482318 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
RUNX1-216ENST00000482318 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
RUNX1-216ENST00000482318 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
RUNX1-216ENST00000482318 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
RUNX1-216ENST00000482318 TRIM26Q12899 539 aaPredicted RBP34.62■■■■□ 3.13
RUNX1-216ENST00000482318 VPS8Q8N3P4 1428 aa34.6■■■■□ 3.13
RUNX1-216ENST00000482318 PCGF6Q9BYE7 350 aa34.57■■■■□ 3.12
RUNX1-216ENST00000482318 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.127e-7■■■■□ 24.7
RUNX1-216ENST00000482318 GRIN2BQ13224 1484 aa34.57■■■■□ 3.12
RUNX1-216ENST00000482318 CTTNBP2Q8WZ74 1663 aa34.56■■■■□ 3.12
RUNX1-216ENST00000482318 RANGAP1P46060 587 aaPredicted RBP34.53■■■■□ 3.12
RUNX1-216ENST00000482318 ZNF608Q9ULD9 1512 aaPredicted RBP34.51■■■■□ 3.11
RUNX1-216ENST00000482318 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
RUNX1-216ENST00000482318 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
RUNX1-216ENST00000482318 ARAP1Q96P48 1450 aa34.49■■■■□ 3.11
RUNX1-216ENST00000482318 FHAD1B1AJZ9 1412 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms