RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
RUNX1-202ENST00000344691 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
RUNX1-202ENST00000344691 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
RUNX1-202ENST00000344691 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
RUNX1-202ENST00000344691 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
RUNX1-202ENST00000344691 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
RUNX1-202ENST00000344691 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
RUNX1-202ENST00000344691 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
RUNX1-202ENST00000344691 APLP2Q06481 763 aa24.01■■□□□ 1.43
RUNX1-202ENST00000344691 ERICH6Q7L0X2 663 aa23.87■■□□□ 1.41
RUNX1-202ENST00000344691 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
RUNX1-202ENST00000344691 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
RUNX1-202ENST00000344691 MYT1Q01538 1121 aa23.44■■□□□ 1.34
RUNX1-202ENST00000344691 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
RUNX1-202ENST00000344691 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
RUNX1-202ENST00000344691 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
RUNX1-202ENST00000344691 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
RUNX1-202ENST00000344691 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
RUNX1-202ENST00000344691 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
RUNX1-202ENST00000344691 POLR3GLQ9BT43 218 aa23.07■■□□□ 1.28
RUNX1-202ENST00000344691 MYT1LQ9UL68 1186 aa23.02■■□□□ 1.28
RUNX1-202ENST00000344691 NEFLP07196 543 aa22.98■■□□□ 1.27
RUNX1-202ENST00000344691 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
RUNX1-202ENST00000344691 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
RUNX1-202ENST00000344691 ITGAEP38570 1179 aa22.81■■□□□ 1.24
RUNX1-202ENST00000344691 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
RUNX1-202ENST00000344691 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
RUNX1-202ENST00000344691 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.22
RUNX1-202ENST00000344691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
RUNX1-202ENST00000344691 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
RUNX1-202ENST00000344691 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
RUNX1-202ENST00000344691 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
RUNX1-202ENST00000344691 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
RUNX1-202ENST00000344691 ZNF316A6NFI3 1004 aaPredicted RBP22.17■■□□□ 1.14
RUNX1-202ENST00000344691 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
RUNX1-202ENST00000344691 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
RUNX1-202ENST00000344691 BCANQ96GW7 911 aa22■■□□□ 1.11
RUNX1-202ENST00000344691 HRCP23327 699 aa21.93■■□□□ 1.1
RUNX1-202ENST00000344691 RTL5Q5HYW3 569 aaPredicted RBP21.92■■□□□ 1.1
RUNX1-202ENST00000344691 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
RUNX1-202ENST00000344691 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
RUNX1-202ENST00000344691 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
RUNX1-202ENST00000344691 ZNF326Q5BKZ1 582 aaKnown RBP21.85■■□□□ 1.09
RUNX1-202ENST00000344691 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
RUNX1-202ENST00000344691 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.07
RUNX1-202ENST00000344691 ZBTB47Q9UFB7 747 aaPredicted RBP21.64■■□□□ 1.05
RUNX1-202ENST00000344691 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
RUNX1-202ENST00000344691 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
RUNX1-202ENST00000344691 FBLN2P98095 1184 aa21.57■■□□□ 1.04
RUNX1-202ENST00000344691 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
RUNX1-202ENST00000344691 NPM2Q86SE8 214 aaKnown RBP21.47■■□□□ 1.03
RUNX1-202ENST00000344691 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
RUNX1-202ENST00000344691 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1.01
RUNX1-202ENST00000344691 PLEKHG5O94827 1062 aa21.3■■□□□ 1
RUNX1-202ENST00000344691 ANP32CO43423 234 aa21.29■■□□□ 1
RUNX1-202ENST00000344691 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
RUNX1-202ENST00000344691 P3H3Q8IVL6 736 aa21.29■■□□□ 1
RUNX1-202ENST00000344691 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
RUNX1-202ENST00000344691 ARXQ96QS3 562 aa21.27■■□□□ 1
RUNX1-202ENST00000344691 EIF5BO60841 1220 aaKnown RBP21.24■□□□□ 0.99
RUNX1-202ENST00000344691 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
RUNX1-202ENST00000344691 A0A0G2JS52 829 aa21.22■□□□□ 0.99
RUNX1-202ENST00000344691 NEFMP07197 916 aa21.21■□□□□ 0.99
RUNX1-202ENST00000344691 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
RUNX1-202ENST00000344691 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
RUNX1-202ENST00000344691 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
RUNX1-202ENST00000344691 HSP90AA1P07900 732 aaKnown RBP21.09■□□□□ 0.97
RUNX1-202ENST00000344691 STAG3Q9UJ98 1225 aa21.02■□□□□ 0.96
RUNX1-202ENST00000344691 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
RUNX1-202ENST00000344691 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
RUNX1-202ENST00000344691 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
RUNX1-202ENST00000344691 TULP1O00294 542 aaPredicted RBP20.96■□□□□ 0.95
RUNX1-202ENST00000344691 NBR1Q14596 966 aa20.96■□□□□ 0.95
RUNX1-202ENST00000344691 FAM9BQ8IZU0 186 aa20.89■□□□□ 0.93
RUNX1-202ENST00000344691 ANP32BQ92688 251 aaKnown RBP20.87■□□□□ 0.93
RUNX1-202ENST00000344691 FKBP8Q14318 412 aa20.86■□□□□ 0.93
RUNX1-202ENST00000344691 TPRNQ4KMQ1 711 aa20.86■□□□□ 0.93
RUNX1-202ENST00000344691 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
RUNX1-202ENST00000344691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.922e-6■■□□□ 11.6
RUNX1-202ENST00000344691 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
RUNX1-202ENST00000344691 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
RUNX1-202ENST00000344691 ABCC9O60706 1549 aa20.75■□□□□ 0.91
RUNX1-202ENST00000344691 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
RUNX1-202ENST00000344691 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
RUNX1-202ENST00000344691 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
RUNX1-202ENST00000344691 UPF2Q9HAU5 1272 aaKnown RBP20.67■□□□□ 0.9
RUNX1-202ENST00000344691 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
RUNX1-202ENST00000344691 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
RUNX1-202ENST00000344691 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
RUNX1-202ENST00000344691 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
RUNX1-202ENST00000344691 CDK11BP21127 795 aaKnown RBP20.62■□□□□ 0.89
RUNX1-202ENST00000344691 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
RUNX1-202ENST00000344691 CCDC136Q96JN2 1154 aa20.52■□□□□ 0.88
RUNX1-202ENST00000344691 TMC1Q8TDI8 760 aa20.52■□□□□ 0.87
RUNX1-202ENST00000344691 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
RUNX1-202ENST00000344691 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
RUNX1-202ENST00000344691 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
RUNX1-202ENST00000344691 HAP1P54257 671 aaPredicted RBP20.43■□□□□ 0.86
RUNX1-202ENST00000344691 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
RUNX1-202ENST00000344691 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms