RNA–Protein interactions for RNA: ENST00000312239.9

HP1BP3-201, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HP1BP3, Length 3,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-201ENST00000312239 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
HP1BP3-201ENST00000312239 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
HP1BP3-201ENST00000312239 NISCHQ9Y2I1 1504 aa13.98□□□□□ -0.17
HP1BP3-201ENST00000312239 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
HP1BP3-201ENST00000312239 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
HP1BP3-201ENST00000312239 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
HP1BP3-201ENST00000312239 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
HP1BP3-201ENST00000312239 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
HP1BP3-201ENST00000312239 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
HP1BP3-201ENST00000312239 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
HP1BP3-201ENST00000312239 FOXD1Q16676 465 aa12.31□□□□□ -0.44
HP1BP3-201ENST00000312239 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
HP1BP3-201ENST00000312239 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
HP1BP3-201ENST00000312239 ADRA2BP18089 450 aa12.12□□□□□ -0.47
HP1BP3-201ENST00000312239 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
HP1BP3-201ENST00000312239 ABCC9O60706 1549 aa11.91□□□□□ -0.5
HP1BP3-201ENST00000312239 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
HP1BP3-201ENST00000312239 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
HP1BP3-201ENST00000312239 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
HP1BP3-201ENST00000312239 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
HP1BP3-201ENST00000312239 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
HP1BP3-201ENST00000312239 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
HP1BP3-201ENST00000312239 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
HP1BP3-201ENST00000312239 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
HP1BP3-201ENST00000312239 PIAS4Q8N2W9 510 aaPredicted RBP11.61□□□□□ -0.55
HP1BP3-201ENST00000312239 APLP2Q06481 763 aa11.56□□□□□ -0.56
HP1BP3-201ENST00000312239 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
HP1BP3-201ENST00000312239 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
HP1BP3-201ENST00000312239 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
HP1BP3-201ENST00000312239 CCER1Q8TC90 406 aaPredicted RBP11.41□□□□□ -0.58
HP1BP3-201ENST00000312239 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
HP1BP3-201ENST00000312239 HRCP23327 699 aa11.3□□□□□ -0.6
HP1BP3-201ENST00000312239 ITGAEP38570 1179 aa11.26□□□□□ -0.61
HP1BP3-201ENST00000312239 HNRNPUL2Q1KMD3 747 aaKnown RBP11.25□□□□□ -0.61
HP1BP3-201ENST00000312239 KCNA4P22459 653 aa11.24□□□□□ -0.61
HP1BP3-201ENST00000312239 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
HP1BP3-201ENST00000312239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
HP1BP3-201ENST00000312239 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
HP1BP3-201ENST00000312239 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
HP1BP3-201ENST00000312239 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
HP1BP3-201ENST00000312239 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
HP1BP3-201ENST00000312239 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
HP1BP3-201ENST00000312239 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
HP1BP3-201ENST00000312239 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
HP1BP3-201ENST00000312239 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
HP1BP3-201ENST00000312239 NACADO15069 1562 aa11.02□□□□□ -0.64
HP1BP3-201ENST00000312239 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.65
HP1BP3-201ENST00000312239 DCAF1Q9Y4B6 1507 aa11.02□□□□□ -0.65
HP1BP3-201ENST00000312239 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
HP1BP3-201ENST00000312239 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
HP1BP3-201ENST00000312239 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
HP1BP3-201ENST00000312239 MSH5O43196 834 aa10.92□□□□□ -0.66
HP1BP3-201ENST00000312239 FBLN2P98095 1184 aa10.92□□□□□ -0.66
HP1BP3-201ENST00000312239 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
HP1BP3-201ENST00000312239 CNGB1Q14028 1251 aaPredicted RBP10.87□□□□□ -0.67
HP1BP3-201ENST00000312239 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
HP1BP3-201ENST00000312239 BAZ1AQ9NRL2 1556 aaPredicted RBP10.84□□□□□ -0.67
HP1BP3-201ENST00000312239 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
HP1BP3-201ENST00000312239 WIZO95785 1651 aa10.82□□□□□ -0.68
HP1BP3-201ENST00000312239 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
HP1BP3-201ENST00000312239 POLR3GLQ9BT43 218 aa10.81□□□□□ -0.68
HP1BP3-201ENST00000312239 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
HP1BP3-201ENST00000312239 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
HP1BP3-201ENST00000312239 SOGA1O94964 1423 aa10.79□□□□□ -0.68
HP1BP3-201ENST00000312239 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
HP1BP3-201ENST00000312239 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.68
HP1BP3-201ENST00000312239 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
HP1BP3-201ENST00000312239 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
HP1BP3-201ENST00000312239 CEP162Q5TB80 1403 aa10.74□□□□□ -0.69
HP1BP3-201ENST00000312239 CLIP1P30622 1438 aa10.72□□□□□ -0.69
HP1BP3-201ENST00000312239 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
HP1BP3-201ENST00000312239 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
HP1BP3-201ENST00000312239 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
HP1BP3-201ENST00000312239 GOLGA3Q08378 1498 aa10.65□□□□□ -0.7
HP1BP3-201ENST00000312239 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.71
HP1BP3-201ENST00000312239 CHIC2Q9UKJ5 165 aa10.64□□□□□ -0.71
HP1BP3-201ENST00000312239 RUSC2Q8N2Y8 1516 aa10.62□□□□□ -0.71
HP1BP3-201ENST00000312239 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
HP1BP3-201ENST00000312239 EEA1Q15075 1411 aa10.59□□□□□ -0.71
HP1BP3-201ENST00000312239 SMARCA4P51532 1647 aa10.59□□□□□ -0.71
HP1BP3-201ENST00000312239 TOP2AP11388 1531 aaKnown RBP10.59□□□□□ -0.71
HP1BP3-201ENST00000312239 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
HP1BP3-201ENST00000312239 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
HP1BP3-201ENST00000312239 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
HP1BP3-201ENST00000312239 ATAD2BQ9ULI0 1458 aa10.57□□□□□ -0.72
HP1BP3-201ENST00000312239 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
HP1BP3-201ENST00000312239 NEFLP07196 543 aa10.56□□□□□ -0.72
HP1BP3-201ENST00000312239 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
HP1BP3-201ENST00000312239 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
HP1BP3-201ENST00000312239 CUX2O14529 1486 aa10.54□□□□□ -0.72
HP1BP3-201ENST00000312239 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
HP1BP3-201ENST00000312239 CHMP7Q8WUX9 453 aaPredicted RBP10.54□□□□□ -0.72
HP1BP3-201ENST00000312239 SLC4A1APQ9BWU0 796 aaKnown RBP10.53□□□□□ -0.72
HP1BP3-201ENST00000312239 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
HP1BP3-201ENST00000312239 MTUS2Q5JR59 1369 aa10.52□□□□□ -0.73
HP1BP3-201ENST00000312239 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
HP1BP3-201ENST00000312239 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
HP1BP3-201ENST00000312239 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
HP1BP3-201ENST00000312239 BCANQ96GW7 911 aa10.49□□□□□ -0.73
HP1BP3-201ENST00000312239 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms