Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CCDC18-AS1-216ENST00000447577 431 ntTSL 58.66□□□□□ -1.029e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-218ENST00000450843 600 ntTSL 57.19□□□□□ -1.269e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-212ENST00000440778 596 ntTSL 57.13□□□□□ -1.279e-11■■□□□ 11.9
XRN2Q9H0D6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.56□□□□□ -1.369e-11■■□□□ 11.9
XRN2Q9H0D6 UBA1-206ENST00000442035 1054 ntTSL 525.24■■□□□ 1.632e-11■■□□□ 11.9
XRN2Q9H0D6 UBA1-208ENST00000457753 809 ntTSL 520.88■□□□□ 0.932e-11■■□□□ 11.9
XRN2Q9H0D6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.548e-9■■□□□ 11.9
XRN2Q9H0D6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.83■□□□□ 0.288e-9■■□□□ 11.9
XRN2Q9H0D6 UBA1-204ENST00000412206 1148 ntTSL 516.8■□□□□ 0.282e-11■■□□□ 11.9
XRN2Q9H0D6 UBA1-205ENST00000427561 671 ntTSL 516.76■□□□□ 0.272e-11■■□□□ 11.9
XRN2Q9H0D6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.062e-11■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-231ENST00000557336 580 ntTSL 313.63□□□□□ -0.232e-34■■□□□ 11.9
XRN2Q9H0D6 EXOC7-211ENST00000465252 3336 ntTSL 213.62□□□□□ -0.237e-9■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-213ENST00000554891 644 ntTSL 512.75□□□□□ -0.372e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-209ENST00000554383 1039 ntTSL 512.34□□□□□ -0.432e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-218ENST00000555215 781 ntTSL 512.34□□□□□ -0.432e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-216ENST00000555137 789 ntTSL 311.9□□□□□ -0.52e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-224ENST00000556226 629 ntTSL 511.9□□□□□ -0.52e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-228ENST00000557033 760 ntTSL 311.67□□□□□ -0.542e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-207ENST00000553614 604 ntTSL 511.23□□□□□ -0.612e-34■■□□□ 11.9
XRN2Q9H0D6 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.932e-11■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-215ENST00000555127 929 ntTSL 27.58□□□□□ -1.22e-34■■□□□ 11.9
XRN2Q9H0D6 HNRNPC-233ENST00000557768 599 ntTSL 36.6□□□□□ -1.352e-34■■□□□ 11.9
XRN2Q9H0D6 UBC-214ENST00000546271 559 ntTSL 414.24□□□□□ -0.133e-7■■□□□ 11.9
XRN2Q9H0D6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.45■□□□□ 0.862e-6■■□□□ 11.9
XRN2Q9H0D6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.742e-6■■□□□ 11.9
XRN2Q9H0D6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.28■□□□□ 0.682e-6■■□□□ 11.9
XRN2Q9H0D6 LPP-206ENST00000430340 521 ntTSL 311.61□□□□□ -0.554e-7■■□□□ 11.9
XRN2Q9H0D6 LPP-209ENST00000454789 343 ntTSL 510.7□□□□□ -0.74e-7■■□□□ 11.9
XRN2Q9H0D6 LPP-203ENST00000416784 612 ntTSL 310.2□□□□□ -0.784e-7■■□□□ 11.9
XRN2Q9H0D6 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.31□□□□□ -1.084e-7■■□□□ 11.9
XRN2Q9H0D6 LPP-201ENST00000414139 502 ntTSL 48.3□□□□□ -1.084e-7■■□□□ 11.9
XRN2Q9H0D6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.947e-7■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.6■■□□□ 1.855e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.655e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-208ENST00000473485 1664 ntTSL 223.53■■□□□ 1.365e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.91■■□□□ 1.265e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-206ENST00000472277 536 ntTSL 322.12■■□□□ 1.135e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)21.58■■□□□ 1.045e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-202ENST00000461670 530 ntTSL 521.22■□□□□ 0.995e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.01■□□□□ 0.635e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.01■□□□□ 0.635e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-209ENST00000496131 962 ntTSL 316.56■□□□□ 0.245e-6■■□□□ 11.9
XRN2Q9H0D6 ATP6V0B-207ENST00000472505 411 ntTSL 515.43■□□□□ 0.065e-6■■□□□ 11.9
XRN2Q9H0D6 CELF1-213ENST00000530151 583 ntTSL 325.82■■□□□ 1.721e-6■■□□□ 11.9
XRN2Q9H0D6 CELF1-210ENST00000526419 476 ntTSL 422.21■■□□□ 1.151e-6■■□□□ 11.9
XRN2Q9H0D6 CELF1-208ENST00000525841 622 ntTSL 517.54■□□□□ 0.41e-6■■□□□ 11.9
XRN2Q9H0D6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.091e-6■■□□□ 11.9
XRN2Q9H0D6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.12□□□□□ -0.151e-6■■□□□ 11.9
XRN2Q9H0D6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.52■■□□□ 1.045e-7■■□□□ 11.9
XRN2Q9H0D6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.77■□□□□ 0.285e-7■■□□□ 11.9
XRN2Q9H0D6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.215e-7■■□□□ 11.9
XRN2Q9H0D6 CUL4A-210ENST00000494985 292 ntTSL 527■■□□□ 1.913e-7■■□□□ 11.9
XRN2Q9H0D6 ARHGEF1-221ENST00000600387 2272 ntTSL 317.97■□□□□ 0.475e-6■■□□□ 11.9
XRN2Q9H0D6 ARHGEF1-214ENST00000596957 570 ntTSL 316.96■□□□□ 0.315e-6■■□□□ 11.9
XRN2Q9H0D6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.376e-9■■□□□ 11.9
XRN2Q9H0D6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.276e-9■■□□□ 11.9
XRN2Q9H0D6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.116e-9■■□□□ 11.9
XRN2Q9H0D6 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.36e-9■■□□□ 11.9
XRN2Q9H0D6 NME3-203ENST00000563367 891 ntTSL 333.32■■■□□ 2.921e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-202ENST00000561637 1014 ntTSL 230.66■■■□□ 2.51e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-208ENST00000565379 911 ntTSL 230.27■■■□□ 2.441e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-209ENST00000566600 913 ntTSL 230.18■■■□□ 2.421e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-206ENST00000564252 599 ntTSL 228.97■■■□□ 2.231e-12■■□□□ 11.8
XRN2Q9H0D6 PSMA7-205ENST00000484488 1023 ntTSL 328.19■■■□□ 2.11e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-210ENST00000567271 752 ntTSL 225.22■■□□□ 1.631e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.99■■□□□ 1.271e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-207ENST00000564628 811 ntTSL 522.99■■□□□ 1.271e-12■■□□□ 11.8
XRN2Q9H0D6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.236e-10■■□□□ 11.8
XRN2Q9H0D6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.081e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-205ENST00000563854 583 ntTSL 521.22■□□□□ 0.991e-12■■□□□ 11.8
XRN2Q9H0D6 DEF8-214ENST00000564379 2354 ntTSL 220.85■□□□□ 0.931e-12■■□□□ 11.8
XRN2Q9H0D6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.98■□□□□ 0.791e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.691e-12■■□□□ 11.8
XRN2Q9H0D6 NME3-211ENST00000568561 813 ntTSL 1 (best)19.03■□□□□ 0.641e-12■■□□□ 11.8
XRN2Q9H0D6 DEF8-212ENST00000563805 992 ntTSL 318.76■□□□□ 0.591e-12■■□□□ 11.8
XRN2Q9H0D6 P2RY11-202ENST00000471843 554 ntTSL 418.62■□□□□ 0.571e-12■■□□□ 11.8
XRN2Q9H0D6 DEF8-207ENST00000562163 473 ntTSL 418.19■□□□□ 0.51e-12■■□□□ 11.8
XRN2Q9H0D6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.471e-10■■□□□ 11.8
XRN2Q9H0D6 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.8□□□□□ -0.361e-10■■□□□ 11.8
XRN2Q9H0D6 TAB2-206ENST00000606202 648 ntTSL 44.07□□□□□ -1.761e-10■■□□□ 11.8
XRN2Q9H0D6 CTDSP1-207ENST00000473420 922 ntTSL 321.73■■□□□ 1.073e-7■■□□□ 11.8
XRN2Q9H0D6 CTDSP1-212ENST00000494067 362 ntTSL 316.12■□□□□ 0.173e-7■■□□□ 11.8
XRN2Q9H0D6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.242e-7■■□□□ 11.8
XRN2Q9H0D6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.2■□□□□ 0.342e-7■■□□□ 11.8
XRN2Q9H0D6 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.89■□□□□ 0.132e-7■■□□□ 11.8
XRN2Q9H0D6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.52□□□□□ -0.092e-7■■□□□ 11.8
XRN2Q9H0D6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.4□□□□□ -0.12e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-220ENST00000556433 1259 ntTSL 327.31■■□□□ 1.966e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-217ENST00000556203 564 ntTSL 317.8■□□□□ 0.446e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.71□□□□□ -0.056e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.48□□□□□ -0.416e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.76e-7■■□□□ 11.8
XRN2Q9H0D6 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-7■■□□□ 11.8
XRN2Q9H0D6 C16orf70-211ENST00000569914 768 ntTSL 321.44■■□□□ 1.023e-7■■□□□ 11.8
XRN2Q9H0D6 C16orf70-210ENST00000569683 905 ntTSL 320.06■□□□□ 0.83e-7■■□□□ 11.8
XRN2Q9H0D6 C16orf70-203ENST00000563853 1025 ntTSL 317.75■□□□□ 0.433e-7■■□□□ 11.8
XRN2Q9H0D6 GPS1-223ENST00000584229 535 ntTSL 328.66■■■□□ 2.185e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-209ENST00000578642 579 ntTSL 422.69■■□□□ 1.225e-6■■□□□ 11.8
XRN2Q9H0D6 GPS1-214ENST00000581418 580 ntTSL 221.69■■□□□ 1.065e-6■■□□□ 11.8
Retrieved 100 of 21,068 protein–RNA pairs in 129.5 ms