RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
HNRNPC-213ENST00000554891 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
HNRNPC-213ENST00000554891 ABCC9O60706 1549 aa23.46■■□□□ 1.35
HNRNPC-213ENST00000554891 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
HNRNPC-213ENST00000554891 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
HNRNPC-213ENST00000554891 NACADO15069 1562 aa22.21■■□□□ 1.15
HNRNPC-213ENST00000554891 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
HNRNPC-213ENST00000554891 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
HNRNPC-213ENST00000554891 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
HNRNPC-213ENST00000554891 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
HNRNPC-213ENST00000554891 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
HNRNPC-213ENST00000554891 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
HNRNPC-213ENST00000554891 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
HNRNPC-213ENST00000554891 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
HNRNPC-213ENST00000554891 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
HNRNPC-213ENST00000554891 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
HNRNPC-213ENST00000554891 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
HNRNPC-213ENST00000554891 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
HNRNPC-213ENST00000554891 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
HNRNPC-213ENST00000554891 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
HNRNPC-213ENST00000554891 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
HNRNPC-213ENST00000554891 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
HNRNPC-213ENST00000554891 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
HNRNPC-213ENST00000554891 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
HNRNPC-213ENST00000554891 HMGXB3Q12766 1538 aa20.36■□□□□ 0.85
HNRNPC-213ENST00000554891 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
HNRNPC-213ENST00000554891 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
HNRNPC-213ENST00000554891 NESP48681 1621 aa20.24■□□□□ 0.83
HNRNPC-213ENST00000554891 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
HNRNPC-213ENST00000554891 WIZO95785 1651 aa20.16■□□□□ 0.82
HNRNPC-213ENST00000554891 CUX2O14529 1486 aa20.04■□□□□ 0.8
HNRNPC-213ENST00000554891 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
HNRNPC-213ENST00000554891 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
HNRNPC-213ENST00000554891 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
HNRNPC-213ENST00000554891 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
HNRNPC-213ENST00000554891 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
HNRNPC-213ENST00000554891 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
HNRNPC-213ENST00000554891 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
HNRNPC-213ENST00000554891 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
HNRNPC-213ENST00000554891 CFTRP13569 1480 aa19.73■□□□□ 0.75
HNRNPC-213ENST00000554891 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
HNRNPC-213ENST00000554891 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
HNRNPC-213ENST00000554891 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
HNRNPC-213ENST00000554891 WDR62O43379 1518 aa19.67■□□□□ 0.74
HNRNPC-213ENST00000554891 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
HNRNPC-213ENST00000554891 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
HNRNPC-213ENST00000554891 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
HNRNPC-213ENST00000554891 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
HNRNPC-213ENST00000554891 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
HNRNPC-213ENST00000554891 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
HNRNPC-213ENST00000554891 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
HNRNPC-213ENST00000554891 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
HNRNPC-213ENST00000554891 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
HNRNPC-213ENST00000554891 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
HNRNPC-213ENST00000554891 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
HNRNPC-213ENST00000554891 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
HNRNPC-213ENST00000554891 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
HNRNPC-213ENST00000554891 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.664e-7■■■■■ 28.5
HNRNPC-213ENST00000554891 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
HNRNPC-213ENST00000554891 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
HNRNPC-213ENST00000554891 CUX1P39880 1505 aa19.12■□□□□ 0.65
HNRNPC-213ENST00000554891 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
HNRNPC-213ENST00000554891 SOGA1O94964 1423 aa19.08■□□□□ 0.65
HNRNPC-213ENST00000554891 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
HNRNPC-213ENST00000554891 CHD1O14646 1710 aa19.03■□□□□ 0.64
HNRNPC-213ENST00000554891 FBLN2P98095 1184 aa18.99■□□□□ 0.63
HNRNPC-213ENST00000554891 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
HNRNPC-213ENST00000554891 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
HNRNPC-213ENST00000554891 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
HNRNPC-213ENST00000554891 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
HNRNPC-213ENST00000554891 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
HNRNPC-213ENST00000554891 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
HNRNPC-213ENST00000554891 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
HNRNPC-213ENST00000554891 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
HNRNPC-213ENST00000554891 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
HNRNPC-213ENST00000554891 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
HNRNPC-213ENST00000554891 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
HNRNPC-213ENST00000554891 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
HNRNPC-213ENST00000554891 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
HNRNPC-213ENST00000554891 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
HNRNPC-213ENST00000554891 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
HNRNPC-213ENST00000554891 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
HNRNPC-213ENST00000554891 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
HNRNPC-213ENST00000554891 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
HNRNPC-213ENST00000554891 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
HNRNPC-213ENST00000554891 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
HNRNPC-213ENST00000554891 ARAP1Q96P48 1450 aa18.76■□□□□ 0.59
HNRNPC-213ENST00000554891 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
HNRNPC-213ENST00000554891 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
HNRNPC-213ENST00000554891 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
HNRNPC-213ENST00000554891 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
HNRNPC-213ENST00000554891 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
HNRNPC-213ENST00000554891 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
HNRNPC-213ENST00000554891 NUP160Q12769 1436 aa18.57■□□□□ 0.56
HNRNPC-213ENST00000554891 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
HNRNPC-213ENST00000554891 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
HNRNPC-213ENST00000554891 IGF1RP08069 1367 aa18.47■□□□□ 0.55
HNRNPC-213ENST00000554891 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
HNRNPC-213ENST00000554891 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
HNRNPC-213ENST00000554891 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms