RNA–Protein interactions for RNA: ENST00000562163.5

DEF8-207, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 4

Gene DEF8, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-207ENST00000562163 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
DEF8-207ENST00000562163 CCDC180Q9P1Z9 1646 aa33.6■■■□□ 2.97
DEF8-207ENST00000562163 ABCC9O60706 1549 aa33.39■■■□□ 2.94
DEF8-207ENST00000562163 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
DEF8-207ENST00000562163 NACADO15069 1562 aa31.69■■■□□ 2.66
DEF8-207ENST00000562163 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
DEF8-207ENST00000562163 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
DEF8-207ENST00000562163 UNC13AQ9UPW8 1703 aa31.17■■■□□ 2.58
DEF8-207ENST00000562163 DNAJC5BQ9UF47 199 aa31.06■■■□□ 2.56
DEF8-207ENST00000562163 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
DEF8-207ENST00000562163 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.55
DEF8-207ENST00000562163 DCAF1Q9Y4B6 1507 aa30.9■■■□□ 2.54
DEF8-207ENST00000562163 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
DEF8-207ENST00000562163 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
DEF8-207ENST00000562163 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
DEF8-207ENST00000562163 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
DEF8-207ENST00000562163 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
DEF8-207ENST00000562163 CECR2Q9BXF3 1484 aa30.09■■■□□ 2.41
DEF8-207ENST00000562163 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
DEF8-207ENST00000562163 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
DEF8-207ENST00000562163 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
DEF8-207ENST00000562163 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
DEF8-207ENST00000562163 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
DEF8-207ENST00000562163 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
DEF8-207ENST00000562163 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
DEF8-207ENST00000562163 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
DEF8-207ENST00000562163 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
DEF8-207ENST00000562163 CUX2O14529 1486 aa28.78■■■□□ 2.2
DEF8-207ENST00000562163 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
DEF8-207ENST00000562163 NESP48681 1621 aa28.68■■■□□ 2.18
DEF8-207ENST00000562163 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
DEF8-207ENST00000562163 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
DEF8-207ENST00000562163 WIZO95785 1651 aa28.47■■■□□ 2.15
DEF8-207ENST00000562163 THOC2Q8NI27 1593 aaKnown RBP28.44■■■□□ 2.14
DEF8-207ENST00000562163 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
DEF8-207ENST00000562163 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
DEF8-207ENST00000562163 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
DEF8-207ENST00000562163 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
DEF8-207ENST00000562163 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
DEF8-207ENST00000562163 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
DEF8-207ENST00000562163 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
DEF8-207ENST00000562163 WDR62O43379 1518 aa28.08■■■□□ 2.08
DEF8-207ENST00000562163 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
DEF8-207ENST00000562163 CFTRP13569 1480 aa28.02■■■□□ 2.08
DEF8-207ENST00000562163 PRDM2Q13029 1718 aa27.9■■■□□ 2.06
DEF8-207ENST00000562163 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.03
DEF8-207ENST00000562163 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
DEF8-207ENST00000562163 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
DEF8-207ENST00000562163 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
DEF8-207ENST00000562163 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
DEF8-207ENST00000562163 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
DEF8-207ENST00000562163 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
DEF8-207ENST00000562163 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
DEF8-207ENST00000562163 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
DEF8-207ENST00000562163 EIF4G3O43432 1585 aaKnown RBP27.33■■□□□ 1.97
DEF8-207ENST00000562163 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
DEF8-207ENST00000562163 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
DEF8-207ENST00000562163 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.948e-8■■■■■ 39.5
DEF8-207ENST00000562163 CHD1O14646 1710 aa27.12■■□□□ 1.93
DEF8-207ENST00000562163 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
DEF8-207ENST00000562163 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
DEF8-207ENST00000562163 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
DEF8-207ENST00000562163 SOGA1O94964 1423 aa27.09■■□□□ 1.93
DEF8-207ENST00000562163 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
DEF8-207ENST00000562163 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.93
DEF8-207ENST00000562163 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
DEF8-207ENST00000562163 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
DEF8-207ENST00000562163 CUX1P39880 1505 aa27.04■■□□□ 1.92
DEF8-207ENST00000562163 ARHGEF11O15085 1522 aa27.02■■□□□ 1.92
DEF8-207ENST00000562163 FBLN2P98095 1184 aa27■■□□□ 1.91
DEF8-207ENST00000562163 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
DEF8-207ENST00000562163 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
DEF8-207ENST00000562163 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
DEF8-207ENST00000562163 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
DEF8-207ENST00000562163 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
DEF8-207ENST00000562163 CHMP7Q8WUX9 453 aaPredicted RBP26.82■■□□□ 1.88
DEF8-207ENST00000562163 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
DEF8-207ENST00000562163 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
DEF8-207ENST00000562163 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
DEF8-207ENST00000562163 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
DEF8-207ENST00000562163 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
DEF8-207ENST00000562163 ABCA5Q8WWZ7 1642 aa26.75■■□□□ 1.87
DEF8-207ENST00000562163 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
DEF8-207ENST00000562163 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
DEF8-207ENST00000562163 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
DEF8-207ENST00000562163 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
DEF8-207ENST00000562163 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
DEF8-207ENST00000562163 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
DEF8-207ENST00000562163 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
DEF8-207ENST00000562163 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
DEF8-207ENST00000562163 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
DEF8-207ENST00000562163 FHAD1B1AJZ9 1412 aa26.45■■□□□ 1.82
DEF8-207ENST00000562163 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
DEF8-207ENST00000562163 NUP160Q12769 1436 aa26.4■■□□□ 1.82
DEF8-207ENST00000562163 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
DEF8-207ENST00000562163 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
DEF8-207ENST00000562163 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
DEF8-207ENST00000562163 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
DEF8-207ENST00000562163 CUL7Q14999 1698 aa26.16■■□□□ 1.78
DEF8-207ENST00000562163 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms