RNA–Protein interactions for RNA: ENST00000563805.1

DEF8-212, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 3

Gene DEF8, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-212ENST00000563805 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
DEF8-212ENST00000563805 ABCC9O60706 1549 aa34.77■■■■□ 3.16
DEF8-212ENST00000563805 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
DEF8-212ENST00000563805 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
DEF8-212ENST00000563805 NACADO15069 1562 aa32.79■■■□□ 2.84
DEF8-212ENST00000563805 DNAJC5BQ9UF47 199 aa32.71■■■□□ 2.83
DEF8-212ENST00000563805 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
DEF8-212ENST00000563805 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
DEF8-212ENST00000563805 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
DEF8-212ENST00000563805 UNC13AQ9UPW8 1703 aa32.35■■■□□ 2.77
DEF8-212ENST00000563805 BICRAQ9NZM4 1560 aa32.19■■■□□ 2.74
DEF8-212ENST00000563805 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
DEF8-212ENST00000563805 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
DEF8-212ENST00000563805 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
DEF8-212ENST00000563805 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
DEF8-212ENST00000563805 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
DEF8-212ENST00000563805 EIF4G1Q04637 1599 aaKnown RBP31.32■■■□□ 2.6
DEF8-212ENST00000563805 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
DEF8-212ENST00000563805 NCAPD3P42695 1498 aa30.33■■■□□ 2.45
DEF8-212ENST00000563805 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
DEF8-212ENST00000563805 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
DEF8-212ENST00000563805 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
DEF8-212ENST00000563805 DNAJC5Q9H3Z4 198 aa30.08■■■□□ 2.41
DEF8-212ENST00000563805 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
DEF8-212ENST00000563805 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
DEF8-212ENST00000563805 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
DEF8-212ENST00000563805 NESP48681 1621 aa29.93■■■□□ 2.38
DEF8-212ENST00000563805 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
DEF8-212ENST00000563805 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
DEF8-212ENST00000563805 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
DEF8-212ENST00000563805 CUX2O14529 1486 aa29.84■■■□□ 2.37
DEF8-212ENST00000563805 LAMC3Q9Y6N6 1575 aa29.59■■■□□ 2.33
DEF8-212ENST00000563805 WIZO95785 1651 aa29.56■■■□□ 2.32
DEF8-212ENST00000563805 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
DEF8-212ENST00000563805 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
DEF8-212ENST00000563805 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
DEF8-212ENST00000563805 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
DEF8-212ENST00000563805 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
DEF8-212ENST00000563805 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
DEF8-212ENST00000563805 WDR62O43379 1518 aa29.14■■■□□ 2.25
DEF8-212ENST00000563805 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
DEF8-212ENST00000563805 CFTRP13569 1480 aa29.1■■■□□ 2.25
DEF8-212ENST00000563805 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
DEF8-212ENST00000563805 CEP164Q9UPV0 1460 aa29.06■■■□□ 2.24
DEF8-212ENST00000563805 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.22
DEF8-212ENST00000563805 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
DEF8-212ENST00000563805 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
DEF8-212ENST00000563805 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
DEF8-212ENST00000563805 TOPBP1Q92547 1522 aa28.55■■■□□ 2.16
DEF8-212ENST00000563805 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
DEF8-212ENST00000563805 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
DEF8-212ENST00000563805 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
DEF8-212ENST00000563805 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
DEF8-212ENST00000563805 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
DEF8-212ENST00000563805 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
DEF8-212ENST00000563805 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
DEF8-212ENST00000563805 AQRO60306 1485 aaKnown RBP eCLIP28.28■■■□□ 2.128e-7■■■■□ 22.3
DEF8-212ENST00000563805 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
DEF8-212ENST00000563805 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
DEF8-212ENST00000563805 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
DEF8-212ENST00000563805 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
DEF8-212ENST00000563805 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
DEF8-212ENST00000563805 SOGA1O94964 1423 aa28.12■■■□□ 2.09
DEF8-212ENST00000563805 CUX1P39880 1505 aa28.12■■■□□ 2.09
DEF8-212ENST00000563805 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
DEF8-212ENST00000563805 CHD1O14646 1710 aa28.09■■■□□ 2.09
DEF8-212ENST00000563805 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
DEF8-212ENST00000563805 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
DEF8-212ENST00000563805 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
DEF8-212ENST00000563805 FBLN2P98095 1184 aa28.01■■■□□ 2.07
DEF8-212ENST00000563805 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
DEF8-212ENST00000563805 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
DEF8-212ENST00000563805 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
DEF8-212ENST00000563805 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
DEF8-212ENST00000563805 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
DEF8-212ENST00000563805 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
DEF8-212ENST00000563805 CLASP1Q7Z460 1538 aa27.81■■■□□ 2.04
DEF8-212ENST00000563805 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
DEF8-212ENST00000563805 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.04
DEF8-212ENST00000563805 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
DEF8-212ENST00000563805 SYNJ2O15056 1496 aa27.75■■■□□ 2.03
DEF8-212ENST00000563805 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
DEF8-212ENST00000563805 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
DEF8-212ENST00000563805 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
DEF8-212ENST00000563805 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
DEF8-212ENST00000563805 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
DEF8-212ENST00000563805 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
DEF8-212ENST00000563805 TRHP20396 242 aaPredicted RBP27.51■■□□□ 1.99
DEF8-212ENST00000563805 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
DEF8-212ENST00000563805 GRIN2AQ12879 1464 aa27.51■■□□□ 1.99
DEF8-212ENST00000563805 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
DEF8-212ENST00000563805 CEP170Q5SW79 1584 aa27.45■■□□□ 1.99
DEF8-212ENST00000563805 NUP160Q12769 1436 aa27.43■■□□□ 1.98
DEF8-212ENST00000563805 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
DEF8-212ENST00000563805 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
DEF8-212ENST00000563805 SHROOM2Q13796 1616 aa27.29■■□□□ 1.96
DEF8-212ENST00000563805 JPH4Q96JJ6 628 aa27.15■■□□□ 1.94
DEF8-212ENST00000563805 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
DEF8-212ENST00000563805 IGF1RP08069 1367 aa27.12■■□□□ 1.93
DEF8-212ENST00000563805 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms