RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 DCAF8L2P0C7V8 631 aa13.95□□□□□ -0.18
LPP-208ENST00000448637 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
LPP-208ENST00000448637 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
LPP-208ENST00000448637 APLP2Q06481 763 aa13.05□□□□□ -0.32
LPP-208ENST00000448637 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
LPP-208ENST00000448637 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
LPP-208ENST00000448637 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
LPP-208ENST00000448637 MYT1Q01538 1121 aa12.87□□□□□ -0.35
LPP-208ENST00000448637 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
LPP-208ENST00000448637 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
LPP-208ENST00000448637 NEFLP07196 543 aa12.54□□□□□ -0.4
LPP-208ENST00000448637 SHROOM4Q9ULL8 1493 aa12.5□□□□□ -0.41
LPP-208ENST00000448637 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
LPP-208ENST00000448637 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
LPP-208ENST00000448637 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
LPP-208ENST00000448637 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
LPP-208ENST00000448637 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
LPP-208ENST00000448637 YTHDC1Q96MU7 727 aaKnown RBP12.34□□□□□ -0.43
LPP-208ENST00000448637 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
LPP-208ENST00000448637 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.46
LPP-208ENST00000448637 NISCHQ9Y2I1 1504 aa12.17□□□□□ -0.46
LPP-208ENST00000448637 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
LPP-208ENST00000448637 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
LPP-208ENST00000448637 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
LPP-208ENST00000448637 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
LPP-208ENST00000448637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
LPP-208ENST00000448637 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
LPP-208ENST00000448637 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
LPP-208ENST00000448637 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
LPP-208ENST00000448637 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
LPP-208ENST00000448637 HRCP23327 699 aa11.98□□□□□ -0.49
LPP-208ENST00000448637 CHIC1Q5VXU3 224 aa11.88□□□□□ -0.51
LPP-208ENST00000448637 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
LPP-208ENST00000448637 ITGAEP38570 1179 aa11.81□□□□□ -0.52
LPP-208ENST00000448637 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
LPP-208ENST00000448637 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
LPP-208ENST00000448637 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
LPP-208ENST00000448637 NEFMP07197 916 aa11.66□□□□□ -0.54
LPP-208ENST00000448637 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
LPP-208ENST00000448637 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
LPP-208ENST00000448637 TRIM52Q96A61 297 aa11.57□□□□□ -0.56
LPP-208ENST00000448637 BCANQ96GW7 911 aa11.54□□□□□ -0.56
LPP-208ENST00000448637 ANP32BQ92688 251 aaKnown RBP11.53□□□□□ -0.56
LPP-208ENST00000448637 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
LPP-208ENST00000448637 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
LPP-208ENST00000448637 FAM50AQ14320 339 aaKnown RBP11.49□□□□□ -0.57
LPP-208ENST00000448637 ANP32CO43423 234 aa11.46□□□□□ -0.58
LPP-208ENST00000448637 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
LPP-208ENST00000448637 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
LPP-208ENST00000448637 CDK11BP21127 795 aaKnown RBP11.44□□□□□ -0.58
LPP-208ENST00000448637 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
LPP-208ENST00000448637 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
LPP-208ENST00000448637 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
LPP-208ENST00000448637 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
LPP-208ENST00000448637 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
LPP-208ENST00000448637 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
LPP-208ENST00000448637 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
LPP-208ENST00000448637 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
LPP-208ENST00000448637 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
LPP-208ENST00000448637 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
LPP-208ENST00000448637 FBLN2P98095 1184 aa11.26□□□□□ -0.61
LPP-208ENST00000448637 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
LPP-208ENST00000448637 LOC105371045A0A1W2PR82 267 aa11.19□□□□□ -0.62
LPP-208ENST00000448637 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.17□□□□□ -0.62
LPP-208ENST00000448637 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
LPP-208ENST00000448637 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
LPP-208ENST00000448637 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
LPP-208ENST00000448637 A0A0G2JS52 829 aa11.11□□□□□ -0.63
LPP-208ENST00000448637 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
LPP-208ENST00000448637 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
LPP-208ENST00000448637 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
LPP-208ENST00000448637 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
LPP-208ENST00000448637 ZRSR1Q15695 479 aaKnown RBP11.07□□□□□ -0.64
LPP-208ENST00000448637 TNNT2P45379 298 aaPredicted RBP11.06□□□□□ -0.64
LPP-208ENST00000448637 ANP32EQ9BTT0 268 aa11.04□□□□□ -0.64
LPP-208ENST00000448637 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
LPP-208ENST00000448637 GOLGA6L22H0YM25 854 aa11.01□□□□□ -0.65
LPP-208ENST00000448637 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
LPP-208ENST00000448637 TRIM44Q96DX7 344 aaPredicted RBP11□□□□□ -0.65
LPP-208ENST00000448637 ARXQ96QS3 562 aa10.99□□□□□ -0.65
LPP-208ENST00000448637 CCDC136Q96JN2 1154 aa10.99□□□□□ -0.65
LPP-208ENST00000448637 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
LPP-208ENST00000448637 BECN1Q14457 450 aa10.98□□□□□ -0.65
LPP-208ENST00000448637 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
LPP-208ENST00000448637 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
LPP-208ENST00000448637 FKBP8Q14318 412 aa10.97□□□□□ -0.65
LPP-208ENST00000448637 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
LPP-208ENST00000448637 HNRNPUQ00839 825 aaKnown RBP eCLIP10.96□□□□□ -0.65
LPP-208ENST00000448637 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.66
LPP-208ENST00000448637 ZBTB7CA1YPR0 619 aa10.96□□□□□ -0.66
LPP-208ENST00000448637 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
LPP-208ENST00000448637 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
LPP-208ENST00000448637 PTMAP06454 111 aaKnown RBP10.94□□□□□ -0.66
LPP-208ENST00000448637 C14orf37Q86TY3 774 aa10.94□□□□□ -0.66
LPP-208ENST00000448637 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
LPP-208ENST00000448637 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
LPP-208ENST00000448637 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
LPP-208ENST00000448637 GOLGA6L6A8MZA4 724 aa10.92□□□□□ -0.66
LPP-208ENST00000448637 NBR1Q14596 966 aa10.9□□□□□ -0.66
LPP-208ENST00000448637 NRDCO43847 1150 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms