RNA–Protein interactions for RNA: ENST00000454789.5

LPP-209, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-209ENST00000454789 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
LPP-209ENST00000454789 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
LPP-209ENST00000454789 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
LPP-209ENST00000454789 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
LPP-209ENST00000454789 ABCC9O60706 1549 aa19.7■□□□□ 0.74
LPP-209ENST00000454789 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
LPP-209ENST00000454789 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
LPP-209ENST00000454789 NACADO15069 1562 aa18.76■□□□□ 0.59
LPP-209ENST00000454789 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
LPP-209ENST00000454789 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
LPP-209ENST00000454789 UNC13AQ9UPW8 1703 aa18.4■□□□□ 0.54
LPP-209ENST00000454789 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
LPP-209ENST00000454789 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
LPP-209ENST00000454789 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
LPP-209ENST00000454789 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
LPP-209ENST00000454789 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
LPP-209ENST00000454789 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
LPP-209ENST00000454789 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
LPP-209ENST00000454789 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
LPP-209ENST00000454789 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
LPP-209ENST00000454789 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
LPP-209ENST00000454789 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.45
LPP-209ENST00000454789 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
LPP-209ENST00000454789 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
LPP-209ENST00000454789 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
LPP-209ENST00000454789 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
LPP-209ENST00000454789 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
LPP-209ENST00000454789 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
LPP-209ENST00000454789 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
LPP-209ENST00000454789 ADRA2BP18089 450 aa17.16■□□□□ 0.34
LPP-209ENST00000454789 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
LPP-209ENST00000454789 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
LPP-209ENST00000454789 CUX2O14529 1486 aa17.05■□□□□ 0.32
LPP-209ENST00000454789 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
LPP-209ENST00000454789 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
LPP-209ENST00000454789 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
LPP-209ENST00000454789 NESP48681 1621 aa16.94■□□□□ 0.3
LPP-209ENST00000454789 FOXD1Q16676 465 aa16.93■□□□□ 0.3
LPP-209ENST00000454789 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
LPP-209ENST00000454789 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
LPP-209ENST00000454789 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
LPP-209ENST00000454789 WIZO95785 1651 aa16.8■□□□□ 0.28
LPP-209ENST00000454789 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
LPP-209ENST00000454789 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
LPP-209ENST00000454789 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
LPP-209ENST00000454789 KCNA4P22459 653 aa16.75■□□□□ 0.27
LPP-209ENST00000454789 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
LPP-209ENST00000454789 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
LPP-209ENST00000454789 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
LPP-209ENST00000454789 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
LPP-209ENST00000454789 WDR62O43379 1518 aa16.62■□□□□ 0.25
LPP-209ENST00000454789 CFTRP13569 1480 aa16.6■□□□□ 0.25
LPP-209ENST00000454789 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
LPP-209ENST00000454789 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
LPP-209ENST00000454789 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
LPP-209ENST00000454789 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
LPP-209ENST00000454789 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
LPP-209ENST00000454789 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
LPP-209ENST00000454789 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
LPP-209ENST00000454789 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
LPP-209ENST00000454789 DNMBPQ6XZF7 1577 aa16.22■□□□□ 0.19
LPP-209ENST00000454789 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
LPP-209ENST00000454789 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
LPP-209ENST00000454789 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
LPP-209ENST00000454789 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
LPP-209ENST00000454789 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
LPP-209ENST00000454789 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
LPP-209ENST00000454789 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
LPP-209ENST00000454789 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
LPP-209ENST00000454789 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
LPP-209ENST00000454789 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
LPP-209ENST00000454789 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
LPP-209ENST00000454789 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
LPP-209ENST00000454789 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
LPP-209ENST00000454789 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
LPP-209ENST00000454789 SOGA1O94964 1423 aa16■□□□□ 0.15
LPP-209ENST00000454789 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
LPP-209ENST00000454789 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
LPP-209ENST00000454789 CUX1P39880 1505 aa15.99■□□□□ 0.15
LPP-209ENST00000454789 CHD1O14646 1710 aa15.98■□□□□ 0.15
LPP-209ENST00000454789 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
LPP-209ENST00000454789 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
LPP-209ENST00000454789 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
LPP-209ENST00000454789 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
LPP-209ENST00000454789 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
LPP-209ENST00000454789 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
LPP-209ENST00000454789 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
LPP-209ENST00000454789 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
LPP-209ENST00000454789 FBLN2P98095 1184 aa15.87■□□□□ 0.13
LPP-209ENST00000454789 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
LPP-209ENST00000454789 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
LPP-209ENST00000454789 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
LPP-209ENST00000454789 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
LPP-209ENST00000454789 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
LPP-209ENST00000454789 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
LPP-209ENST00000454789 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
LPP-209ENST00000454789 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
LPP-209ENST00000454789 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
LPP-209ENST00000454789 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
LPP-209ENST00000454789 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms