RNA–Protein interactions for RNA: ENST00000310513.10

CELF1-201, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF1, Length 4,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-201ENST00000310513 NISCHQ9Y2I1 1504 aa25.21■■□□□ 1.63
CELF1-201ENST00000310513 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
CELF1-201ENST00000310513 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
CELF1-201ENST00000310513 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
CELF1-201ENST00000310513 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
CELF1-201ENST00000310513 APLP2Q06481 763 aa22.27■■□□□ 1.16
CELF1-201ENST00000310513 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
CELF1-201ENST00000310513 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
CELF1-201ENST00000310513 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
CELF1-201ENST00000310513 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
CELF1-201ENST00000310513 TTBK1Q5TCY1 1321 aaPredicted RBP21.73■■□□□ 1.07
CELF1-201ENST00000310513 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
CELF1-201ENST00000310513 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
CELF1-201ENST00000310513 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
CELF1-201ENST00000310513 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
CELF1-201ENST00000310513 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
CELF1-201ENST00000310513 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.02
CELF1-201ENST00000310513 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
CELF1-201ENST00000310513 ABCC9O60706 1549 aa21.31■■□□□ 1
CELF1-201ENST00000310513 CENPBP07199 599 aaPredicted RBP21.29■■□□□ 1
CELF1-201ENST00000310513 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
CELF1-201ENST00000310513 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
CELF1-201ENST00000310513 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
CELF1-201ENST00000310513 HRCP23327 699 aa21.06■□□□□ 0.96
CELF1-201ENST00000310513 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
CELF1-201ENST00000310513 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
CELF1-201ENST00000310513 ITGAEP38570 1179 aa20.78■□□□□ 0.92
CELF1-201ENST00000310513 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
CELF1-201ENST00000310513 NEFLP07196 543 aa20.73■□□□□ 0.91
CELF1-201ENST00000310513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
CELF1-201ENST00000310513 YTHDC1Q96MU7 727 aaKnown RBP20.7■□□□□ 0.9
CELF1-201ENST00000310513 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
CELF1-201ENST00000310513 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
CELF1-201ENST00000310513 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
CELF1-201ENST00000310513 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
CELF1-201ENST00000310513 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
CELF1-201ENST00000310513 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
CELF1-201ENST00000310513 POLR3GLQ9BT43 218 aa20.32■□□□□ 0.84
CELF1-201ENST00000310513 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
CELF1-201ENST00000310513 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
CELF1-201ENST00000310513 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
CELF1-201ENST00000310513 NACADO15069 1562 aa20.17■□□□□ 0.82
CELF1-201ENST00000310513 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
CELF1-201ENST00000310513 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
CELF1-201ENST00000310513 FBLN2P98095 1184 aa20.1■□□□□ 0.81
CELF1-201ENST00000310513 MYT1Q01538 1121 aa20.08■□□□□ 0.8
CELF1-201ENST00000310513 P3H3Q8IVL6 736 aa20.06■□□□□ 0.8
CELF1-201ENST00000310513 ZNF316A6NFI3 1004 aaPredicted RBP20.03■□□□□ 0.8
CELF1-201ENST00000310513 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
CELF1-201ENST00000310513 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
CELF1-201ENST00000310513 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
CELF1-201ENST00000310513 EEA1Q15075 1411 aa19.96■□□□□ 0.79
CELF1-201ENST00000310513 ANP32CO43423 234 aa19.93■□□□□ 0.78
CELF1-201ENST00000310513 DAXXQ9UER7 740 aaPredicted RBP19.87■□□□□ 0.77
CELF1-201ENST00000310513 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
CELF1-201ENST00000310513 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
CELF1-201ENST00000310513 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
CELF1-201ENST00000310513 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.76
CELF1-201ENST00000310513 CLIP1P30622 1438 aa19.82■□□□□ 0.76
CELF1-201ENST00000310513 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
CELF1-201ENST00000310513 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.766e-6■□□□□ 10.9
CELF1-201ENST00000310513 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
CELF1-201ENST00000310513 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
CELF1-201ENST00000310513 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
CELF1-201ENST00000310513 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
CELF1-201ENST00000310513 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
CELF1-201ENST00000310513 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
CELF1-201ENST00000310513 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
CELF1-201ENST00000310513 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
CELF1-201ENST00000310513 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
CELF1-201ENST00000310513 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
CELF1-201ENST00000310513 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
CELF1-201ENST00000310513 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
CELF1-201ENST00000310513 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
CELF1-201ENST00000310513 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
CELF1-201ENST00000310513 BCANQ96GW7 911 aa19.53■□□□□ 0.72
CELF1-201ENST00000310513 CHIC2Q9UKJ5 165 aa19.49■□□□□ 0.71
CELF1-201ENST00000310513 TSPY4P0CV99 314 aa19.49■□□□□ 0.71
CELF1-201ENST00000310513 TSPY10P0CW01 314 aa19.49■□□□□ 0.71
CELF1-201ENST00000310513 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
CELF1-201ENST00000310513 RTL5Q5HYW3 569 aaPredicted RBP19.46■□□□□ 0.71
CELF1-201ENST00000310513 WIZO95785 1651 aa19.45■□□□□ 0.7
CELF1-201ENST00000310513 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
CELF1-201ENST00000310513 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
CELF1-201ENST00000310513 NEFMP07197 916 aa19.39■□□□□ 0.69
CELF1-201ENST00000310513 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
CELF1-201ENST00000310513 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
CELF1-201ENST00000310513 ESF1Q9H501 851 aaKnown RBP19.32■□□□□ 0.68
CELF1-201ENST00000310513 SOGA1O94964 1423 aa19.32■□□□□ 0.68
CELF1-201ENST00000310513 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
CELF1-201ENST00000310513 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
CELF1-201ENST00000310513 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.685e-8■□□□□ 8.2
CELF1-201ENST00000310513 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
CELF1-201ENST00000310513 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
CELF1-201ENST00000310513 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
CELF1-201ENST00000310513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.687e-7■■□□□ 14.2
CELF1-201ENST00000310513 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
CELF1-201ENST00000310513 CUX2O14529 1486 aa19.27■□□□□ 0.68
CELF1-201ENST00000310513 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
CELF1-201ENST00000310513 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms