RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-205ENST00000427561 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
UBA1-205ENST00000427561 ABCC9O60706 1549 aa30.94■■■□□ 2.54
UBA1-205ENST00000427561 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
UBA1-205ENST00000427561 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
UBA1-205ENST00000427561 NACADO15069 1562 aa29.24■■■□□ 2.27
UBA1-205ENST00000427561 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
UBA1-205ENST00000427561 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
UBA1-205ENST00000427561 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
UBA1-205ENST00000427561 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
UBA1-205ENST00000427561 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.24e-10■□□□□ 11.2
UBA1-205ENST00000427561 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
UBA1-205ENST00000427561 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
UBA1-205ENST00000427561 DCAF1Q9Y4B6 1507 aa28.39■■■□□ 2.14
UBA1-205ENST00000427561 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
UBA1-205ENST00000427561 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
UBA1-205ENST00000427561 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
UBA1-205ENST00000427561 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
UBA1-205ENST00000427561 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
UBA1-205ENST00000427561 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
UBA1-205ENST00000427561 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
UBA1-205ENST00000427561 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
UBA1-205ENST00000427561 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
UBA1-205ENST00000427561 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
UBA1-205ENST00000427561 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
UBA1-205ENST00000427561 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
UBA1-205ENST00000427561 CUX2O14529 1486 aa26.71■■□□□ 1.87
UBA1-205ENST00000427561 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
UBA1-205ENST00000427561 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
UBA1-205ENST00000427561 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
UBA1-205ENST00000427561 NESP48681 1621 aa26.55■■□□□ 1.84
UBA1-205ENST00000427561 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
UBA1-205ENST00000427561 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
UBA1-205ENST00000427561 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
UBA1-205ENST00000427561 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
UBA1-205ENST00000427561 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
UBA1-205ENST00000427561 WIZO95785 1651 aa26.18■■□□□ 1.78
UBA1-205ENST00000427561 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
UBA1-205ENST00000427561 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
UBA1-205ENST00000427561 WDR62O43379 1518 aa25.93■■□□□ 1.74
UBA1-205ENST00000427561 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
UBA1-205ENST00000427561 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
UBA1-205ENST00000427561 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
UBA1-205ENST00000427561 CFTRP13569 1480 aa25.83■■□□□ 1.73
UBA1-205ENST00000427561 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
UBA1-205ENST00000427561 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
UBA1-205ENST00000427561 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
UBA1-205ENST00000427561 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
UBA1-205ENST00000427561 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
UBA1-205ENST00000427561 OSCARQ8IYS5 282 aa25.51■■□□□ 1.67
UBA1-205ENST00000427561 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
UBA1-205ENST00000427561 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
UBA1-205ENST00000427561 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
UBA1-205ENST00000427561 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
UBA1-205ENST00000427561 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
UBA1-205ENST00000427561 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
UBA1-205ENST00000427561 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
UBA1-205ENST00000427561 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
UBA1-205ENST00000427561 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
UBA1-205ENST00000427561 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
UBA1-205ENST00000427561 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.612e-10■■■□□ 17.3
UBA1-205ENST00000427561 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
UBA1-205ENST00000427561 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
UBA1-205ENST00000427561 CHD1O14646 1710 aa25.06■■□□□ 1.6
UBA1-205ENST00000427561 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
UBA1-205ENST00000427561 SOGA1O94964 1423 aa24.98■■□□□ 1.59
UBA1-205ENST00000427561 FBLN2P98095 1184 aa24.97■■□□□ 1.59
UBA1-205ENST00000427561 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
UBA1-205ENST00000427561 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
UBA1-205ENST00000427561 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
UBA1-205ENST00000427561 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
UBA1-205ENST00000427561 CUX1P39880 1505 aa24.87■■□□□ 1.57
UBA1-205ENST00000427561 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.56
UBA1-205ENST00000427561 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
UBA1-205ENST00000427561 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
UBA1-205ENST00000427561 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
UBA1-205ENST00000427561 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
UBA1-205ENST00000427561 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
UBA1-205ENST00000427561 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
UBA1-205ENST00000427561 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
UBA1-205ENST00000427561 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
UBA1-205ENST00000427561 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
UBA1-205ENST00000427561 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
UBA1-205ENST00000427561 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
UBA1-205ENST00000427561 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
UBA1-205ENST00000427561 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
UBA1-205ENST00000427561 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.524e-7■■■□□ 16.7
UBA1-205ENST00000427561 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
UBA1-205ENST00000427561 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
UBA1-205ENST00000427561 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
UBA1-205ENST00000427561 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
UBA1-205ENST00000427561 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
UBA1-205ENST00000427561 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
UBA1-205ENST00000427561 NUP160Q12769 1436 aa24.35■■□□□ 1.49
UBA1-205ENST00000427561 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
UBA1-205ENST00000427561 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.48
UBA1-205ENST00000427561 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
UBA1-205ENST00000427561 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
UBA1-205ENST00000427561 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
UBA1-205ENST00000427561 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
UBA1-205ENST00000427561 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms