RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
ARHGEF1-214ENST00000596957 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
ARHGEF1-214ENST00000596957 ABCC9O60706 1549 aa30.2■■■□□ 2.42
ARHGEF1-214ENST00000596957 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
ARHGEF1-214ENST00000596957 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
ARHGEF1-214ENST00000596957 NACADO15069 1562 aa29.22■■■□□ 2.27
ARHGEF1-214ENST00000596957 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
ARHGEF1-214ENST00000596957 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ARHGEF1-214ENST00000596957 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
ARHGEF1-214ENST00000596957 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
ARHGEF1-214ENST00000596957 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
ARHGEF1-214ENST00000596957 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
ARHGEF1-214ENST00000596957 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
ARHGEF1-214ENST00000596957 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
ARHGEF1-214ENST00000596957 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
ARHGEF1-214ENST00000596957 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
ARHGEF1-214ENST00000596957 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF1-214ENST00000596957 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
ARHGEF1-214ENST00000596957 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
ARHGEF1-214ENST00000596957 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
ARHGEF1-214ENST00000596957 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
ARHGEF1-214ENST00000596957 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
ARHGEF1-214ENST00000596957 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
ARHGEF1-214ENST00000596957 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
ARHGEF1-214ENST00000596957 NCAPD3P42695 1498 aa26.96■■□□□ 1.91
ARHGEF1-214ENST00000596957 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
ARHGEF1-214ENST00000596957 WIZO95785 1651 aa26.92■■□□□ 1.9
ARHGEF1-214ENST00000596957 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
ARHGEF1-214ENST00000596957 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
ARHGEF1-214ENST00000596957 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
ARHGEF1-214ENST00000596957 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
ARHGEF1-214ENST00000596957 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
ARHGEF1-214ENST00000596957 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
ARHGEF1-214ENST00000596957 NESP48681 1621 aa26.21■■□□□ 1.79
ARHGEF1-214ENST00000596957 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
ARHGEF1-214ENST00000596957 CFTRP13569 1480 aa26.13■■□□□ 1.77
ARHGEF1-214ENST00000596957 PDS5BQ9NTI5 1447 aa26.06■■□□□ 1.76
ARHGEF1-214ENST00000596957 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
ARHGEF1-214ENST00000596957 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
ARHGEF1-214ENST00000596957 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
ARHGEF1-214ENST00000596957 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
ARHGEF1-214ENST00000596957 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
ARHGEF1-214ENST00000596957 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
ARHGEF1-214ENST00000596957 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
ARHGEF1-214ENST00000596957 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
ARHGEF1-214ENST00000596957 WDR62O43379 1518 aa25.59■■□□□ 1.69
ARHGEF1-214ENST00000596957 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
ARHGEF1-214ENST00000596957 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
ARHGEF1-214ENST00000596957 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
ARHGEF1-214ENST00000596957 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
ARHGEF1-214ENST00000596957 CUX2O14529 1486 aa25.53■■□□□ 1.68
ARHGEF1-214ENST00000596957 CUX1P39880 1505 aa25.5■■□□□ 1.67
ARHGEF1-214ENST00000596957 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
ARHGEF1-214ENST00000596957 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
ARHGEF1-214ENST00000596957 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
ARHGEF1-214ENST00000596957 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
ARHGEF1-214ENST00000596957 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
ARHGEF1-214ENST00000596957 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
ARHGEF1-214ENST00000596957 SOGA1O94964 1423 aa25.32■■□□□ 1.64
ARHGEF1-214ENST00000596957 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
ARHGEF1-214ENST00000596957 RAD54L2Q9Y4B4 1467 aa25.28■■□□□ 1.64
ARHGEF1-214ENST00000596957 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
ARHGEF1-214ENST00000596957 TARBP1Q13395 1621 aaKnown RBP25.18■■□□□ 1.62
ARHGEF1-214ENST00000596957 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
ARHGEF1-214ENST00000596957 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
ARHGEF1-214ENST00000596957 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
ARHGEF1-214ENST00000596957 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.611e-7■■■■■ 31.6
ARHGEF1-214ENST00000596957 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
ARHGEF1-214ENST00000596957 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
ARHGEF1-214ENST00000596957 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
ARHGEF1-214ENST00000596957 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
ARHGEF1-214ENST00000596957 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
ARHGEF1-214ENST00000596957 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
ARHGEF1-214ENST00000596957 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
ARHGEF1-214ENST00000596957 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
ARHGEF1-214ENST00000596957 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
ARHGEF1-214ENST00000596957 FBLN2P98095 1184 aa24.84■■□□□ 1.57
ARHGEF1-214ENST00000596957 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
ARHGEF1-214ENST00000596957 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
ARHGEF1-214ENST00000596957 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.56
ARHGEF1-214ENST00000596957 IGF1RP08069 1367 aa24.8■■□□□ 1.56
ARHGEF1-214ENST00000596957 EEA1Q15075 1411 aa24.79■■□□□ 1.56
ARHGEF1-214ENST00000596957 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
ARHGEF1-214ENST00000596957 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
ARHGEF1-214ENST00000596957 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
ARHGEF1-214ENST00000596957 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
ARHGEF1-214ENST00000596957 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
ARHGEF1-214ENST00000596957 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
ARHGEF1-214ENST00000596957 CUL7Q14999 1698 aa24.69■■□□□ 1.54
ARHGEF1-214ENST00000596957 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
ARHGEF1-214ENST00000596957 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
ARHGEF1-214ENST00000596957 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
ARHGEF1-214ENST00000596957 CHD1O14646 1710 aa24.6■■□□□ 1.53
ARHGEF1-214ENST00000596957 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
ARHGEF1-214ENST00000596957 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
ARHGEF1-214ENST00000596957 NUP160Q12769 1436 aa24.46■■□□□ 1.51
ARHGEF1-214ENST00000596957 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
ARHGEF1-214ENST00000596957 KIF21BO75037 1637 aa24.43■■□□□ 1.5
ARHGEF1-214ENST00000596957 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
ARHGEF1-214ENST00000596957 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms