RNA–Protein interactions for RNA: ENST00000471859.6

ATP6V0B-204, Transcript of ATPase H+ transporting V0 subunit b, humanhuman

TSL 5 BASIC

Gene ATP6V0B, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0B-204ENST00000471859 NISCHQ9Y2I1 1504 aa54.6■■■■■ 6.33
ATP6V0B-204ENST00000471859 ABCC9O60706 1549 aa49.23■■■■■ 5.47
ATP6V0B-204ENST00000471859 CCDC180Q9P1Z9 1646 aa49.09■■■■■ 5.45
ATP6V0B-204ENST00000471859 RB1CC1Q8TDY2 1594 aa46.81■■■■■ 5.08
ATP6V0B-204ENST00000471859 NACADO15069 1562 aa46.46■■■■■ 5.03
ATP6V0B-204ENST00000471859 DNAJC5BQ9UF47 199 aa46.34■■■■■ 5.01
ATP6V0B-204ENST00000471859 DCAF8L2P0C7V8 631 aa46.09■■■■■ 4.97
ATP6V0B-204ENST00000471859 MYO15BQ96JP2 1530 aa45.8■■■■■ 4.92
ATP6V0B-204ENST00000471859 PABPN1Q86U42 306 aaKnown RBP eCLIP45.79■■■■■ 4.92
ATP6V0B-204ENST00000471859 UNC13AQ9UPW8 1703 aa45.68■■■■■ 4.9
ATP6V0B-204ENST00000471859 BICRAQ9NZM4 1560 aa45.44■■■■■ 4.86
ATP6V0B-204ENST00000471859 ZCCHC6Q5VYS8 1495 aaKnown RBP45.21■■■■■ 4.83
ATP6V0B-204ENST00000471859 DCAF1Q9Y4B6 1507 aa45.13■■■■■ 4.82
ATP6V0B-204ENST00000471859 SHROOM4Q9ULL8 1493 aa44.9■■■■■ 4.78
ATP6V0B-204ENST00000471859 SCRIBQ14160 1630 aa44.65■■■■■ 4.74
ATP6V0B-204ENST00000471859 CC2D2AQ9P2K1 1620 aa44.46■■■■■ 4.71
ATP6V0B-204ENST00000471859 CECR2Q9BXF3 1484 aa44.4■■■■■ 4.7
ATP6V0B-204ENST00000471859 EIF4G1Q04637 1599 aaKnown RBP44.35■■■■■ 4.69
ATP6V0B-204ENST00000471859 NCAPD3P42695 1498 aa42.91■■■■■ 4.46
ATP6V0B-204ENST00000471859 DNAJC5Q9H3Z4 198 aa42.75■■■■■ 4.43
ATP6V0B-204ENST00000471859 ATAD2BQ9ULI0 1458 aa42.72■■■■■ 4.43
ATP6V0B-204ENST00000471859 SMARCA4P51532 1647 aa42.61■■■■■ 4.41
ATP6V0B-204ENST00000471859 SMARCA2P51531 1590 aa42.61■■■■■ 4.41
ATP6V0B-204ENST00000471859 CUX2O14529 1486 aa42.57■■■■■ 4.41
ATP6V0B-204ENST00000471859 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
ATP6V0B-204ENST00000471859 ERCC6Q03468 1493 aa42.54■■■■■ 4.4
ATP6V0B-204ENST00000471859 BAZ1AQ9NRL2 1556 aaPredicted RBP42.39■■■■■ 4.38
ATP6V0B-204ENST00000471859 BAZ1BQ9UIG0 1483 aaKnown RBP42.3■■■■■ 4.36
ATP6V0B-204ENST00000471859 PEG3Q9GZU2 1588 aa42.24■■■■■ 4.35
ATP6V0B-204ENST00000471859 NESP48681 1621 aa42.23■■■■■ 4.35
ATP6V0B-204ENST00000471859 MROH2BQ7Z745 1585 aa42.04■■■■■ 4.32
ATP6V0B-204ENST00000471859 LAMC3Q9Y6N6 1575 aa41.95■■■■■ 4.31
ATP6V0B-204ENST00000471859 THOC2Q8NI27 1593 aaKnown RBP41.86■■■■■ 4.29
ATP6V0B-204ENST00000471859 PDS5BQ9NTI5 1447 aa41.73■■■■■ 4.27
ATP6V0B-204ENST00000471859 KIF21AQ7Z4S6 1674 aa41.66■■■■■ 4.26
ATP6V0B-204ENST00000471859 CADPSQ9ULU8 1353 aa41.58■■■■■ 4.25
ATP6V0B-204ENST00000471859 WIZO95785 1651 aa41.49■■■■■ 4.23
ATP6V0B-204ENST00000471859 MRC2Q9UBG0 1479 aa41.37■■■■■ 4.21
ATP6V0B-204ENST00000471859 WDR62O43379 1518 aa41.27■■■■■ 4.2
ATP6V0B-204ENST00000471859 CEP164Q9UPV0 1460 aa41.16■■■■■ 4.18
ATP6V0B-204ENST00000471859 RSF1Q96T23 1441 aaPredicted RBP41.11■■■■■ 4.17
ATP6V0B-204ENST00000471859 FANCD2Q9BXW9 1451 aa41.09■■■■■ 4.17
ATP6V0B-204ENST00000471859 CFTRP13569 1480 aa41.07■■■■■ 4.16
ATP6V0B-204ENST00000471859 TOP2AP11388 1531 aaKnown RBP41.01■■■■■ 4.16
ATP6V0B-204ENST00000471859 URB2Q14146 1524 aaKnown RBP40.76■■■■■ 4.12
ATP6V0B-204ENST00000471859 TRIM41Q8WV44 630 aa40.74■■■■■ 4.11
ATP6V0B-204ENST00000471859 PRDM2Q13029 1718 aa40.59■■■■■ 4.09
ATP6V0B-204ENST00000471859 OSCARQ8IYS5 282 aa40.57■■■■■ 4.09
ATP6V0B-204ENST00000471859 CCDC88BA6NC98 1476 aa40.53■■■■■ 4.08
ATP6V0B-204ENST00000471859 IFT140Q96RY7 1462 aa40.36■■■■■ 4.05
ATP6V0B-204ENST00000471859 TOPBP1Q92547 1522 aa40.29■■■■■ 4.04
ATP6V0B-204ENST00000471859 ZNF608Q9ULD9 1512 aaPredicted RBP40.27■■■■■ 4.04
ATP6V0B-204ENST00000471859 ABCC8Q09428 1581 aa40.23■■■■■ 4.03
ATP6V0B-204ENST00000471859 DNMBPQ6XZF7 1577 aa40.14■■■■■ 4.02
ATP6V0B-204ENST00000471859 EIF4G3O43432 1585 aaKnown RBP40.05■■■■■ 4
ATP6V0B-204ENST00000471859 RIMBP3CA6NJZ7 1639 aa40.04■■■■■ 4
ATP6V0B-204ENST00000471859 RIMBP3BA6NNM3 1639 aa40.04■■■■■ 4
ATP6V0B-204ENST00000471859 RIMBP3Q9UFD9 1639 aa40.04■■■■■ 4
ATP6V0B-204ENST00000471859 TARBP1Q13395 1621 aaKnown RBP39.94■■■■□ 3.99
ATP6V0B-204ENST00000471859 ARHGEF11O15085 1522 aa39.91■■■■□ 3.98
ATP6V0B-204ENST00000471859 AQRO60306 1485 aaKnown RBP eCLIP39.88■■■■□ 3.982e-9■■■■■ 47
ATP6V0B-204ENST00000471859 POLA1P09884 1462 aaPredicted RBP39.88■■■■□ 3.97
ATP6V0B-204ENST00000471859 CHD1O14646 1710 aa39.75■■■■□ 3.95
ATP6V0B-204ENST00000471859 RAD54L2Q9Y4B4 1467 aa39.69■■■■□ 3.94
ATP6V0B-204ENST00000471859 SOGA1O94964 1423 aa39.68■■■■□ 3.94
ATP6V0B-204ENST00000471859 FBLN2P98095 1184 aa39.65■■■■□ 3.94
ATP6V0B-204ENST00000471859 TDRD9Q8NDG6 1382 aaKnown RBP39.61■■■■□ 3.93
ATP6V0B-204ENST00000471859 CYB5RLQ6IPT4 315 aa39.61■■■■□ 3.93
ATP6V0B-204ENST00000471859 FGD5Q6ZNL6 1462 aa39.58■■■■□ 3.93
ATP6V0B-204ENST00000471859 WDR97A6NE52 1622 aa39.58■■■■□ 3.93
ATP6V0B-204ENST00000471859 CUX1P39880 1505 aa39.51■■■■□ 3.92
ATP6V0B-204ENST00000471859 ARAP1Q96P48 1450 aa39.5■■■■□ 3.91
ATP6V0B-204ENST00000471859 SNAPC4Q5SXM2 1469 aa39.49■■■■□ 3.91
ATP6V0B-204ENST00000471859 MAGI1Q96QZ7 1491 aaPredicted RBP39.41■■■■□ 3.9
ATP6V0B-204ENST00000471859 GRIN2BQ13224 1484 aa39.38■■■■□ 3.9
ATP6V0B-204ENST00000471859 CHMP7Q8WUX9 453 aaPredicted RBP39.36■■■■□ 3.89
ATP6V0B-204ENST00000471859 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
ATP6V0B-204ENST00000471859 SYNJ1O43426 1573 aa39.31■■■■□ 3.88
ATP6V0B-204ENST00000471859 SYNJ2O15056 1496 aa39.28■■■■□ 3.88
ATP6V0B-204ENST00000471859 TRHP20396 242 aaPredicted RBP39.22■■■■□ 3.87
ATP6V0B-204ENST00000471859 GAPVD1Q14C86 1478 aa39.2■■■■□ 3.87
ATP6V0B-204ENST00000471859 PBRM1Q86U86 1689 aa39.16■■■■□ 3.86
ATP6V0B-204ENST00000471859 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
ATP6V0B-204ENST00000471859 SUPT5HO00267 1087 aaKnown RBP39.1■■■■□ 3.85
ATP6V0B-204ENST00000471859 ABCA5Q8WWZ7 1642 aa39.09■■■■□ 3.85
ATP6V0B-204ENST00000471859 WRNQ14191 1432 aaPredicted RBP eCLIP38.95■■■■□ 3.83
ATP6V0B-204ENST00000471859 GRIN2AQ12879 1464 aa38.86■■■■□ 3.81
ATP6V0B-204ENST00000471859 TOP2BQ02880 1626 aa38.84■■■■□ 3.81
ATP6V0B-204ENST00000471859 BIVM-ERCC5R4GMW8 1640 aa38.84■■■■□ 3.81
ATP6V0B-204ENST00000471859 ADAMTS12P58397 1594 aa38.81■■■■□ 3.8
ATP6V0B-204ENST00000471859 NUP160Q12769 1436 aa38.75■■■■□ 3.79
ATP6V0B-204ENST00000471859 FHAD1B1AJZ9 1412 aa38.72■■■■□ 3.79
ATP6V0B-204ENST00000471859 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
ATP6V0B-204ENST00000471859 ERCC6L2Q5T890 1561 aa38.68■■■■□ 3.78
ATP6V0B-204ENST00000471859 ERICH3Q5RHP9 1530 aa38.66■■■■□ 3.78
ATP6V0B-204ENST00000471859 SHROOM2Q13796 1616 aa38.59■■■■□ 3.77
ATP6V0B-204ENST00000471859 PRG4Q92954 1404 aaPredicted RBP38.38■■■■□ 3.73
ATP6V0B-204ENST00000471859 JPH4Q96JJ6 628 aa38.34■■■■□ 3.73
ATP6V0B-204ENST00000471859 RUSC2Q8N2Y8 1516 aa38.27■■■■□ 3.72
ATP6V0B-204ENST00000471859 AEBP2Q6ZN18 517 aaPredicted RBP38.23■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms