RNA–Protein interactions for RNA: ENST00000440778.5

CCDC18-AS1-212, CCDC18 antisense RNA 1, humanhuman

TSL 5

Gene CCDC18-AS1, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-AS1-212ENST00000440778 AEBP2Q6ZN18 517 aaPredicted RBP31.63■■■□□ 2.65
CCDC18-AS1-212ENST00000440778 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
CCDC18-AS1-212ENST00000440778 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CCDC18-AS1-212ENST00000440778 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
CCDC18-AS1-212ENST00000440778 FOXD1Q16676 465 aa25.17■■□□□ 1.62
CCDC18-AS1-212ENST00000440778 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
CCDC18-AS1-212ENST00000440778 MSH5O43196 834 aa23.71■■□□□ 1.39
CCDC18-AS1-212ENST00000440778 PIAS4Q8N2W9 510 aaPredicted RBP23.6■■□□□ 1.37
CCDC18-AS1-212ENST00000440778 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
CCDC18-AS1-212ENST00000440778 ADRA2BP18089 450 aa23.47■■□□□ 1.35
CCDC18-AS1-212ENST00000440778 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
CCDC18-AS1-212ENST00000440778 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
CCDC18-AS1-212ENST00000440778 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
CCDC18-AS1-212ENST00000440778 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
CCDC18-AS1-212ENST00000440778 PPP4R3CPQ6ZMV5 832 aa21.25■□□□□ 0.99
CCDC18-AS1-212ENST00000440778 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
CCDC18-AS1-212ENST00000440778 HOXD11P31277 338 aaPredicted RBP20.82■□□□□ 0.92
CCDC18-AS1-212ENST00000440778 RNF216Q9NWF9 866 aaPredicted RBP20.71■□□□□ 0.91
CCDC18-AS1-212ENST00000440778 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
CCDC18-AS1-212ENST00000440778 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
CCDC18-AS1-212ENST00000440778 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
CCDC18-AS1-212ENST00000440778 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
CCDC18-AS1-212ENST00000440778 RNF39Q9H2S5 420 aa20.15■□□□□ 0.82
CCDC18-AS1-212ENST00000440778 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
CCDC18-AS1-212ENST00000440778 C1QBPQ07021 282 aaKnown RBP19.95■□□□□ 0.78
CCDC18-AS1-212ENST00000440778 KCNA4P22459 653 aa19.81■□□□□ 0.76
CCDC18-AS1-212ENST00000440778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC18-AS1-212ENST00000440778 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
CCDC18-AS1-212ENST00000440778 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
CCDC18-AS1-212ENST00000440778 APLP2Q06481 763 aa19.09■□□□□ 0.65
CCDC18-AS1-212ENST00000440778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
CCDC18-AS1-212ENST00000440778 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
CCDC18-AS1-212ENST00000440778 CAPN15O75808 1086 aa18.99■□□□□ 0.63
CCDC18-AS1-212ENST00000440778 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
CCDC18-AS1-212ENST00000440778 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CCDC18-AS1-212ENST00000440778 DSG3P32926 999 aa18.87■□□□□ 0.61
CCDC18-AS1-212ENST00000440778 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
CCDC18-AS1-212ENST00000440778 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
CCDC18-AS1-212ENST00000440778 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
CCDC18-AS1-212ENST00000440778 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
CCDC18-AS1-212ENST00000440778 FOXD4L1Q9NU39 408 aa18.59■□□□□ 0.57
CCDC18-AS1-212ENST00000440778 ABCB7O75027 752 aa18.47■□□□□ 0.55
CCDC18-AS1-212ENST00000440778 POLA2Q14181 598 aa18.24■□□□□ 0.51
CCDC18-AS1-212ENST00000440778 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
CCDC18-AS1-212ENST00000440778 ZBTB22O15209 634 aa18.16■□□□□ 0.5
CCDC18-AS1-212ENST00000440778 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
CCDC18-AS1-212ENST00000440778 ZBTB12Q9Y330 459 aaPredicted RBP18.1■□□□□ 0.49
CCDC18-AS1-212ENST00000440778 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
CCDC18-AS1-212ENST00000440778 POTEHQ6S545 545 aa17.9■□□□□ 0.46
CCDC18-AS1-212ENST00000440778 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
CCDC18-AS1-212ENST00000440778 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
CCDC18-AS1-212ENST00000440778 FBLN2P98095 1184 aa17.61■□□□□ 0.41
CCDC18-AS1-212ENST00000440778 CHRDL2Q6WN34 429 aa17.59■□□□□ 0.41
CCDC18-AS1-212ENST00000440778 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
CCDC18-AS1-212ENST00000440778 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
CCDC18-AS1-212ENST00000440778 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
CCDC18-AS1-212ENST00000440778 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
CCDC18-AS1-212ENST00000440778 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
CCDC18-AS1-212ENST00000440778 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
CCDC18-AS1-212ENST00000440778 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
CCDC18-AS1-212ENST00000440778 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
CCDC18-AS1-212ENST00000440778 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
CCDC18-AS1-212ENST00000440778 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
CCDC18-AS1-212ENST00000440778 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
CCDC18-AS1-212ENST00000440778 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC18-AS1-212ENST00000440778 SPDYE1Q8NFV5 336 aaPredicted RBP17.12■□□□□ 0.33
CCDC18-AS1-212ENST00000440778 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
CCDC18-AS1-212ENST00000440778 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC18-AS1-212ENST00000440778 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
CCDC18-AS1-212ENST00000440778 HAX1O00165 279 aa16.81■□□□□ 0.28
CCDC18-AS1-212ENST00000440778 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
CCDC18-AS1-212ENST00000440778 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CCDC18-AS1-212ENST00000440778 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
CCDC18-AS1-212ENST00000440778 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
CCDC18-AS1-212ENST00000440778 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
CCDC18-AS1-212ENST00000440778 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
CCDC18-AS1-212ENST00000440778 EVX2Q03828 476 aa16.47■□□□□ 0.23
CCDC18-AS1-212ENST00000440778 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
CCDC18-AS1-212ENST00000440778 CLCN6P51797 869 aa16.33■□□□□ 0.2
CCDC18-AS1-212ENST00000440778 PROM2Q8N271 834 aa16.32■□□□□ 0.2
CCDC18-AS1-212ENST00000440778 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
CCDC18-AS1-212ENST00000440778 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
CCDC18-AS1-212ENST00000440778 GABBR2O75899 941 aa16.24■□□□□ 0.19
CCDC18-AS1-212ENST00000440778 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
CCDC18-AS1-212ENST00000440778 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
CCDC18-AS1-212ENST00000440778 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
CCDC18-AS1-212ENST00000440778 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
CCDC18-AS1-212ENST00000440778 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CCDC18-AS1-212ENST00000440778 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
CCDC18-AS1-212ENST00000440778 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
CCDC18-AS1-212ENST00000440778 FKBP8Q14318 412 aa15.86■□□□□ 0.13
CCDC18-AS1-212ENST00000440778 MIER1Q8N108 512 aa15.85■□□□□ 0.13
CCDC18-AS1-212ENST00000440778 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 LHX8Q68G74 356 aa15.78■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 PHF12Q96QT6 1004 aa15.78■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.12
CCDC18-AS1-212ENST00000440778 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
CCDC18-AS1-212ENST00000440778 TSPYL2Q9H2G4 693 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms