RNA–Protein interactions for RNA: ENST00000530151.5

CELF1-213, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 3

Gene CELF1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-213ENST00000530151 NISCHQ9Y2I1 1504 aa53.54■■■■■ 6.16
CELF1-213ENST00000530151 CCDC180Q9P1Z9 1646 aa47.7■■■■■ 5.23
CELF1-213ENST00000530151 ABCC9O60706 1549 aa47.07■■■■■ 5.13
CELF1-213ENST00000530151 RB1CC1Q8TDY2 1594 aa45.07■■■■■ 4.81
CELF1-213ENST00000530151 NACADO15069 1562 aa44.94■■■■■ 4.79
CELF1-213ENST00000530151 DCAF8L2P0C7V8 631 aa44.92■■■■■ 4.78
CELF1-213ENST00000530151 MYO15BQ96JP2 1530 aa44.55■■■■■ 4.72
CELF1-213ENST00000530151 ZCCHC6Q5VYS8 1495 aaKnown RBP44.53■■■■■ 4.72
CELF1-213ENST00000530151 DCAF1Q9Y4B6 1507 aa44.24■■■■■ 4.67
CELF1-213ENST00000530151 UNC13AQ9UPW8 1703 aa44.1■■■■■ 4.65
CELF1-213ENST00000530151 PABPN1Q86U42 306 aaKnown RBP eCLIP43.96■■■■■ 4.63
CELF1-213ENST00000530151 BICRAQ9NZM4 1560 aa43.76■■■■■ 4.6
CELF1-213ENST00000530151 SCRIBQ14160 1630 aa43.58■■■■■ 4.57
CELF1-213ENST00000530151 DNAJC5BQ9UF47 199 aa43.54■■■■■ 4.56
CELF1-213ENST00000530151 SHROOM4Q9ULL8 1493 aa43.19■■■■■ 4.51
CELF1-213ENST00000530151 EIF4G1Q04637 1599 aaKnown RBP42.63■■■■■ 4.41
CELF1-213ENST00000530151 CC2D2AQ9P2K1 1620 aa42.56■■■■■ 4.4
CELF1-213ENST00000530151 CECR2Q9BXF3 1484 aa42.31■■■■■ 4.36
CELF1-213ENST00000530151 SMARCA4P51532 1647 aa41.62■■■■■ 4.25
CELF1-213ENST00000530151 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
CELF1-213ENST00000530151 ATAD2BQ9ULI0 1458 aa41.49■■■■■ 4.23
CELF1-213ENST00000530151 NCAPD3P42695 1498 aa41.48■■■■■ 4.23
CELF1-213ENST00000530151 SMARCA2P51531 1590 aa41.38■■■■■ 4.22
CELF1-213ENST00000530151 MROH2BQ7Z745 1585 aa41.29■■■■■ 4.2
CELF1-213ENST00000530151 HMGXB3Q12766 1538 aa41.24■■■■■ 4.19
CELF1-213ENST00000530151 PEG3Q9GZU2 1588 aa41.19■■■■■ 4.18
CELF1-213ENST00000530151 BAZ1BQ9UIG0 1483 aaKnown RBP41.12■■■■■ 4.17
CELF1-213ENST00000530151 WIZO95785 1651 aa40.84■■■■■ 4.13
CELF1-213ENST00000530151 RSF1Q96T23 1441 aaPredicted RBP40.68■■■■■ 4.1
CELF1-213ENST00000530151 NESP48681 1621 aa40.65■■■■■ 4.1
CELF1-213ENST00000530151 ERCC6Q03468 1493 aa40.58■■■■■ 4.09
CELF1-213ENST00000530151 LAMC3Q9Y6N6 1575 aa40.44■■■■■ 4.06
CELF1-213ENST00000530151 TOP2AP11388 1531 aaKnown RBP40.35■■■■■ 4.05
CELF1-213ENST00000530151 CADPSQ9ULU8 1353 aa40.28■■■■■ 4.04
CELF1-213ENST00000530151 CUX2O14529 1486 aa40.24■■■■■ 4.03
CELF1-213ENST00000530151 PDS5BQ9NTI5 1447 aa40.18■■■■■ 4.02
CELF1-213ENST00000530151 KIF21AQ7Z4S6 1674 aa40.14■■■■■ 4.02
CELF1-213ENST00000530151 THOC2Q8NI27 1593 aaKnown RBP40.08■■■■■ 4.01
CELF1-213ENST00000530151 CFTRP13569 1480 aa39.96■■■■□ 3.99
CELF1-213ENST00000530151 CCDC88BA6NC98 1476 aa39.89■■■■□ 3.98
CELF1-213ENST00000530151 FANCD2Q9BXW9 1451 aa39.82■■■■□ 3.97
CELF1-213ENST00000530151 MRC2Q9UBG0 1479 aa39.81■■■■□ 3.96
CELF1-213ENST00000530151 CEP164Q9UPV0 1460 aa39.8■■■■□ 3.96
CELF1-213ENST00000530151 WDR62O43379 1518 aa39.69■■■■□ 3.94
CELF1-213ENST00000530151 PRDM2Q13029 1718 aa39.62■■■■□ 3.93
CELF1-213ENST00000530151 URB2Q14146 1524 aaKnown RBP39.46■■■■□ 3.91
CELF1-213ENST00000530151 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
CELF1-213ENST00000530151 DNAJC5Q9H3Z4 198 aa39.41■■■■□ 3.9
CELF1-213ENST00000530151 TOPBP1Q92547 1522 aa39.15■■■■□ 3.86
CELF1-213ENST00000530151 ABCC8Q09428 1581 aa39.07■■■■□ 3.84
CELF1-213ENST00000530151 DNMBPQ6XZF7 1577 aa39.06■■■■□ 3.84
CELF1-213ENST00000530151 IFT140Q96RY7 1462 aa38.97■■■■□ 3.83
CELF1-213ENST00000530151 ZNF608Q9ULD9 1512 aaPredicted RBP38.87■■■■□ 3.81
CELF1-213ENST00000530151 POLA1P09884 1462 aaPredicted RBP38.8■■■■□ 3.8
CELF1-213ENST00000530151 CUX1P39880 1505 aa38.75■■■■□ 3.79
CELF1-213ENST00000530151 TARBP1Q13395 1621 aaKnown RBP38.74■■■■□ 3.79
CELF1-213ENST00000530151 EIF4G3O43432 1585 aaKnown RBP38.67■■■■□ 3.78
CELF1-213ENST00000530151 FGD5Q6ZNL6 1462 aa38.66■■■■□ 3.78
CELF1-213ENST00000530151 RAD54L2Q9Y4B4 1467 aa38.66■■■■□ 3.78
CELF1-213ENST00000530151 SOGA1O94964 1423 aa38.63■■■■□ 3.78
CELF1-213ENST00000530151 AQRO60306 1485 aaKnown RBP eCLIP38.6■■■■□ 3.772e-8■□□□□ 10.2
CELF1-213ENST00000530151 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
CELF1-213ENST00000530151 TDRD9Q8NDG6 1382 aaKnown RBP38.47■■■■□ 3.75
CELF1-213ENST00000530151 WDR97A6NE52 1622 aa38.37■■■■□ 3.73
CELF1-213ENST00000530151 WRNQ14191 1432 aaPredicted RBP eCLIP38.36■■■■□ 3.73
CELF1-213ENST00000530151 SYNJ1O43426 1573 aa38.31■■■■□ 3.72
CELF1-213ENST00000530151 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
CELF1-213ENST00000530151 BIVM-ERCC5R4GMW8 1640 aa38.3■■■■□ 3.72
CELF1-213ENST00000530151 ABCA10Q8WWZ4 1543 aa38.26■■■■□ 3.72
CELF1-213ENST00000530151 CHD1O14646 1710 aa38.26■■■■□ 3.71
CELF1-213ENST00000530151 SNAPC4Q5SXM2 1469 aa38.23■■■■□ 3.71
CELF1-213ENST00000530151 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
CELF1-213ENST00000530151 FBLN2P98095 1184 aa38.2■■■■□ 3.71
CELF1-213ENST00000530151 GAPVD1Q14C86 1478 aa38.18■■■■□ 3.7
CELF1-213ENST00000530151 ABCA5Q8WWZ7 1642 aa38.14■■■■□ 3.7
CELF1-213ENST00000530151 MAGI1Q96QZ7 1491 aaPredicted RBP38.13■■■■□ 3.69
CELF1-213ENST00000530151 PBRM1Q86U86 1689 aa38.12■■■■□ 3.69
CELF1-213ENST00000530151 CHMP7Q8WUX9 453 aaPredicted RBP38.02■■■■□ 3.68
CELF1-213ENST00000530151 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
CELF1-213ENST00000530151 SYNJ2O15056 1496 aa38■■■■□ 3.67
CELF1-213ENST00000530151 RIMBP3CA6NJZ7 1639 aa37.97■■■■□ 3.67
CELF1-213ENST00000530151 RIMBP3BA6NNM3 1639 aa37.97■■■■□ 3.67
CELF1-213ENST00000530151 RIMBP3Q9UFD9 1639 aa37.97■■■■□ 3.67
CELF1-213ENST00000530151 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
CELF1-213ENST00000530151 CLASP1Q7Z460 1538 aa37.82■■■■□ 3.65
CELF1-213ENST00000530151 ADAMTS12P58397 1594 aa37.81■■■■□ 3.64
CELF1-213ENST00000530151 ERICH3Q5RHP9 1530 aa37.77■■■■□ 3.64
CELF1-213ENST00000530151 GRIN2AQ12879 1464 aa37.72■■■■□ 3.63
CELF1-213ENST00000530151 FHAD1B1AJZ9 1412 aa37.71■■■■□ 3.63
CELF1-213ENST00000530151 ARAP1Q96P48 1450 aa37.61■■■■□ 3.61
CELF1-213ENST00000530151 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
CELF1-213ENST00000530151 NUP160Q12769 1436 aa37.57■■■■□ 3.6
CELF1-213ENST00000530151 CEP170Q5SW79 1584 aa37.57■■■■□ 3.6
CELF1-213ENST00000530151 KIF27Q86VH2 1401 aa37.57■■■■□ 3.6
CELF1-213ENST00000530151 IGF1RP08069 1367 aa37.48■■■■□ 3.59
CELF1-213ENST00000530151 CUL7Q14999 1698 aa37.37■■■■□ 3.57
CELF1-213ENST00000530151 ERCC6L2Q5T890 1561 aa37.33■■■■□ 3.57
CELF1-213ENST00000530151 SHROOM2Q13796 1616 aa37.32■■■■□ 3.56
CELF1-213ENST00000530151 RUSC2Q8N2Y8 1516 aa37.26■■■■□ 3.55
CELF1-213ENST00000530151 CARMIL1Q5VZK9 1371 aa37.25■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms