RNA–Protein interactions for RNA: ENST00000559250.5

PCK2-208, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 5 BASIC

Gene PCK2, Length 1,804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-208ENST00000559250 NISCHQ9Y2I1 1504 aa33.15■■■□□ 2.9
PCK2-208ENST00000559250 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
PCK2-208ENST00000559250 ABCC9O60706 1549 aa29.1■■■□□ 2.25
PCK2-208ENST00000559250 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
PCK2-208ENST00000559250 NACADO15069 1562 aa27.76■■■□□ 2.03
PCK2-208ENST00000559250 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
PCK2-208ENST00000559250 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
PCK2-208ENST00000559250 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
PCK2-208ENST00000559250 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
PCK2-208ENST00000559250 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
PCK2-208ENST00000559250 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
PCK2-208ENST00000559250 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
PCK2-208ENST00000559250 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
PCK2-208ENST00000559250 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
PCK2-208ENST00000559250 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
PCK2-208ENST00000559250 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
PCK2-208ENST00000559250 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
PCK2-208ENST00000559250 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
PCK2-208ENST00000559250 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
PCK2-208ENST00000559250 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
PCK2-208ENST00000559250 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
PCK2-208ENST00000559250 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
PCK2-208ENST00000559250 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
PCK2-208ENST00000559250 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
PCK2-208ENST00000559250 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
PCK2-208ENST00000559250 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PCK2-208ENST00000559250 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
PCK2-208ENST00000559250 WIZO95785 1651 aa25.35■■□□□ 1.65
PCK2-208ENST00000559250 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
PCK2-208ENST00000559250 NESP48681 1621 aa25.18■■□□□ 1.62
PCK2-208ENST00000559250 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
PCK2-208ENST00000559250 TOP2AP11388 1531 aaKnown RBP24.99■■□□□ 1.59
PCK2-208ENST00000559250 LAMC3Q9Y6N6 1575 aa24.98■■□□□ 1.59
PCK2-208ENST00000559250 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
PCK2-208ENST00000559250 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
PCK2-208ENST00000559250 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
PCK2-208ENST00000559250 CUX2O14529 1486 aa24.78■■□□□ 1.56
PCK2-208ENST00000559250 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
PCK2-208ENST00000559250 CFTRP13569 1480 aa24.72■■□□□ 1.55
PCK2-208ENST00000559250 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
PCK2-208ENST00000559250 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
PCK2-208ENST00000559250 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
PCK2-208ENST00000559250 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
PCK2-208ENST00000559250 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
PCK2-208ENST00000559250 WDR62O43379 1518 aa24.54■■□□□ 1.52
PCK2-208ENST00000559250 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
PCK2-208ENST00000559250 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
PCK2-208ENST00000559250 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
PCK2-208ENST00000559250 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
PCK2-208ENST00000559250 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
PCK2-208ENST00000559250 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
PCK2-208ENST00000559250 ZNF608Q9ULD9 1512 aaPredicted RBP24.07■■□□□ 1.44
PCK2-208ENST00000559250 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
PCK2-208ENST00000559250 CUX1P39880 1505 aa24.02■■□□□ 1.44
PCK2-208ENST00000559250 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
PCK2-208ENST00000559250 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
PCK2-208ENST00000559250 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
PCK2-208ENST00000559250 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
PCK2-208ENST00000559250 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
PCK2-208ENST00000559250 AQRO60306 1485 aaKnown RBP eCLIP23.88■■□□□ 1.415e-7■■■■■ 36
PCK2-208ENST00000559250 SOGA1O94964 1423 aa23.86■■□□□ 1.41
PCK2-208ENST00000559250 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
PCK2-208ENST00000559250 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
PCK2-208ENST00000559250 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
PCK2-208ENST00000559250 BIVM-ERCC5R4GMW8 1640 aa23.75■■□□□ 1.39
PCK2-208ENST00000559250 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
PCK2-208ENST00000559250 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
PCK2-208ENST00000559250 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
PCK2-208ENST00000559250 CHD1O14646 1710 aa23.71■■□□□ 1.39
PCK2-208ENST00000559250 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
PCK2-208ENST00000559250 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
PCK2-208ENST00000559250 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.37
PCK2-208ENST00000559250 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
PCK2-208ENST00000559250 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
PCK2-208ENST00000559250 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
PCK2-208ENST00000559250 FBLN2P98095 1184 aa23.57■■□□□ 1.36
PCK2-208ENST00000559250 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
PCK2-208ENST00000559250 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
PCK2-208ENST00000559250 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
PCK2-208ENST00000559250 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
PCK2-208ENST00000559250 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
PCK2-208ENST00000559250 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
PCK2-208ENST00000559250 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
PCK2-208ENST00000559250 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
PCK2-208ENST00000559250 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
PCK2-208ENST00000559250 CLASP1Q7Z460 1538 aa23.4■■□□□ 1.34
PCK2-208ENST00000559250 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
PCK2-208ENST00000559250 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
PCK2-208ENST00000559250 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
PCK2-208ENST00000559250 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
PCK2-208ENST00000559250 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
PCK2-208ENST00000559250 NUP160Q12769 1436 aa23.23■■□□□ 1.31
PCK2-208ENST00000559250 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
PCK2-208ENST00000559250 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
PCK2-208ENST00000559250 IGF1RP08069 1367 aa23.19■■□□□ 1.3
PCK2-208ENST00000559250 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
PCK2-208ENST00000559250 CUL7Q14999 1698 aa23.13■■□□□ 1.29
PCK2-208ENST00000559250 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
PCK2-208ENST00000559250 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
PCK2-208ENST00000559250 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms