RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
UBA1-203ENST00000377351 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
UBA1-203ENST00000377351 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.28
UBA1-203ENST00000377351 MYT1Q01538 1121 aa16.49■□□□□ 0.23
UBA1-203ENST00000377351 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
UBA1-203ENST00000377351 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
UBA1-203ENST00000377351 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.21
UBA1-203ENST00000377351 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
UBA1-203ENST00000377351 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
UBA1-203ENST00000377351 ABCC9O60706 1549 aa15.85■□□□□ 0.13
UBA1-203ENST00000377351 HRCP23327 699 aa15.78■□□□□ 0.12
UBA1-203ENST00000377351 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.1
UBA1-203ENST00000377351 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
UBA1-203ENST00000377351 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
UBA1-203ENST00000377351 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
UBA1-203ENST00000377351 NACADO15069 1562 aa15.61■□□□□ 0.09
UBA1-203ENST00000377351 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
UBA1-203ENST00000377351 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
UBA1-203ENST00000377351 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
UBA1-203ENST00000377351 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
UBA1-203ENST00000377351 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
UBA1-203ENST00000377351 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
UBA1-203ENST00000377351 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
UBA1-203ENST00000377351 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
UBA1-203ENST00000377351 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
UBA1-203ENST00000377351 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
UBA1-203ENST00000377351 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
UBA1-203ENST00000377351 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.018e-7■■■□□ 15
UBA1-203ENST00000377351 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
UBA1-203ENST00000377351 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
UBA1-203ENST00000377351 SLC24A1O60721 1099 aa15.07■□□□□ 0
UBA1-203ENST00000377351 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
UBA1-203ENST00000377351 WIZO95785 1651 aa15.03■□□□□ -0
UBA1-203ENST00000377351 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
UBA1-203ENST00000377351 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
UBA1-203ENST00000377351 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
UBA1-203ENST00000377351 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
UBA1-203ENST00000377351 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
UBA1-203ENST00000377351 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
UBA1-203ENST00000377351 APLP2Q06481 763 aa14.78□□□□□ -0.04
UBA1-203ENST00000377351 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
UBA1-203ENST00000377351 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
UBA1-203ENST00000377351 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
UBA1-203ENST00000377351 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
UBA1-203ENST00000377351 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
UBA1-203ENST00000377351 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
UBA1-203ENST00000377351 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
UBA1-203ENST00000377351 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
UBA1-203ENST00000377351 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
UBA1-203ENST00000377351 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
UBA1-203ENST00000377351 ANP32EQ9BTT0 268 aa14.56□□□□□ -0.08
UBA1-203ENST00000377351 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
UBA1-203ENST00000377351 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
UBA1-203ENST00000377351 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
UBA1-203ENST00000377351 EIF5BO60841 1220 aaKnown RBP14.48□□□□□ -0.09
UBA1-203ENST00000377351 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
UBA1-203ENST00000377351 YTHDC1Q96MU7 727 aaKnown RBP14.42□□□□□ -0.1
UBA1-203ENST00000377351 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
UBA1-203ENST00000377351 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.14e-7■■■□□ 16.7
UBA1-203ENST00000377351 SOGA1O94964 1423 aa14.36□□□□□ -0.11
UBA1-203ENST00000377351 ANO8Q9HCE9 1232 aaPredicted RBP14.35□□□□□ -0.11
UBA1-203ENST00000377351 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
UBA1-203ENST00000377351 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
UBA1-203ENST00000377351 EEA1Q15075 1411 aa14.27□□□□□ -0.12
UBA1-203ENST00000377351 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
UBA1-203ENST00000377351 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
UBA1-203ENST00000377351 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
UBA1-203ENST00000377351 CFTRP13569 1480 aa14.21□□□□□ -0.13
UBA1-203ENST00000377351 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
UBA1-203ENST00000377351 DIEXFQ68CQ4 756 aaKnown RBP14.2□□□□□ -0.14
UBA1-203ENST00000377351 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
UBA1-203ENST00000377351 DAXXQ9UER7 740 aaPredicted RBP14.16□□□□□ -0.14
UBA1-203ENST00000377351 TNIKQ9UKE5 1360 aa14.15□□□□□ -0.14
UBA1-203ENST00000377351 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
UBA1-203ENST00000377351 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
UBA1-203ENST00000377351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
UBA1-203ENST00000377351 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
UBA1-203ENST00000377351 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
UBA1-203ENST00000377351 CUX1P39880 1505 aa14.12□□□□□ -0.15
UBA1-203ENST00000377351 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
UBA1-203ENST00000377351 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
UBA1-203ENST00000377351 KIF21BO75037 1637 aa14.05□□□□□ -0.16
UBA1-203ENST00000377351 PODXL2Q9NZ53 605 aa14.05□□□□□ -0.16
UBA1-203ENST00000377351 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
UBA1-203ENST00000377351 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
UBA1-203ENST00000377351 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
UBA1-203ENST00000377351 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
UBA1-203ENST00000377351 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
UBA1-203ENST00000377351 KIF27Q86VH2 1401 aa14□□□□□ -0.17
UBA1-203ENST00000377351 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
UBA1-203ENST00000377351 NESP48681 1621 aa13.99□□□□□ -0.17
UBA1-203ENST00000377351 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
UBA1-203ENST00000377351 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
UBA1-203ENST00000377351 CLIP1P30622 1438 aa13.97□□□□□ -0.17
UBA1-203ENST00000377351 PKNOX2Q96KN3 472 aa13.95□□□□□ -0.18
UBA1-203ENST00000377351 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
UBA1-203ENST00000377351 CUX2O14529 1486 aa13.94□□□□□ -0.18
UBA1-203ENST00000377351 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
UBA1-203ENST00000377351 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
UBA1-203ENST00000377351 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms