RNA–Protein interactions for RNA: ENST00000416784.5

LPP-203, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-203ENST00000416784 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.94
LPP-203ENST00000416784 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
LPP-203ENST00000416784 ABCC9O60706 1549 aa18.54■□□□□ 0.56
LPP-203ENST00000416784 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
LPP-203ENST00000416784 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
LPP-203ENST00000416784 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
LPP-203ENST00000416784 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
LPP-203ENST00000416784 NACADO15069 1562 aa17.64■□□□□ 0.41
LPP-203ENST00000416784 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
LPP-203ENST00000416784 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
LPP-203ENST00000416784 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
LPP-203ENST00000416784 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
LPP-203ENST00000416784 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
LPP-203ENST00000416784 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
LPP-203ENST00000416784 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
LPP-203ENST00000416784 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
LPP-203ENST00000416784 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
LPP-203ENST00000416784 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
LPP-203ENST00000416784 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
LPP-203ENST00000416784 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
LPP-203ENST00000416784 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
LPP-203ENST00000416784 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
LPP-203ENST00000416784 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
LPP-203ENST00000416784 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
LPP-203ENST00000416784 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
LPP-203ENST00000416784 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
LPP-203ENST00000416784 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
LPP-203ENST00000416784 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
LPP-203ENST00000416784 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
LPP-203ENST00000416784 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
LPP-203ENST00000416784 WIZO95785 1651 aa15.96■□□□□ 0.15
LPP-203ENST00000416784 NESP48681 1621 aa15.94■□□□□ 0.14
LPP-203ENST00000416784 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
LPP-203ENST00000416784 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
LPP-203ENST00000416784 CUX2O14529 1486 aa15.89■□□□□ 0.13
LPP-203ENST00000416784 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
LPP-203ENST00000416784 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
LPP-203ENST00000416784 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
LPP-203ENST00000416784 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
LPP-203ENST00000416784 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.12
LPP-203ENST00000416784 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
LPP-203ENST00000416784 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
LPP-203ENST00000416784 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
LPP-203ENST00000416784 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
LPP-203ENST00000416784 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
LPP-203ENST00000416784 CFTRP13569 1480 aa15.61■□□□□ 0.09
LPP-203ENST00000416784 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
LPP-203ENST00000416784 WDR62O43379 1518 aa15.58■□□□□ 0.09
LPP-203ENST00000416784 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
LPP-203ENST00000416784 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
LPP-203ENST00000416784 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
LPP-203ENST00000416784 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
LPP-203ENST00000416784 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
LPP-203ENST00000416784 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
LPP-203ENST00000416784 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
LPP-203ENST00000416784 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
LPP-203ENST00000416784 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
LPP-203ENST00000416784 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
LPP-203ENST00000416784 EIF4G3O43432 1585 aaKnown RBP15.2■□□□□ 0.02
LPP-203ENST00000416784 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
LPP-203ENST00000416784 TARBP1Q13395 1621 aaKnown RBP15.16■□□□□ 0.02
LPP-203ENST00000416784 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
LPP-203ENST00000416784 SOGA1O94964 1423 aa15.14■□□□□ 0.01
LPP-203ENST00000416784 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
LPP-203ENST00000416784 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
LPP-203ENST00000416784 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.01
LPP-203ENST00000416784 CUX1P39880 1505 aa15.12■□□□□ 0.01
LPP-203ENST00000416784 FBLN2P98095 1184 aa15.09■□□□□ 0.01
LPP-203ENST00000416784 CHD1O14646 1710 aa15.08■□□□□ 0
LPP-203ENST00000416784 WDR97A6NE52 1622 aa15.07■□□□□ 0
LPP-203ENST00000416784 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
LPP-203ENST00000416784 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
LPP-203ENST00000416784 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
LPP-203ENST00000416784 PBRM1Q86U86 1689 aa15□□□□□ -0.01
LPP-203ENST00000416784 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
LPP-203ENST00000416784 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
LPP-203ENST00000416784 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
LPP-203ENST00000416784 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
LPP-203ENST00000416784 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
LPP-203ENST00000416784 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
LPP-203ENST00000416784 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
LPP-203ENST00000416784 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
LPP-203ENST00000416784 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
LPP-203ENST00000416784 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
LPP-203ENST00000416784 ABCA10Q8WWZ4 1543 aa14.95□□□□□ -0.02
LPP-203ENST00000416784 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
LPP-203ENST00000416784 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
LPP-203ENST00000416784 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
LPP-203ENST00000416784 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
LPP-203ENST00000416784 CLASP1Q7Z460 1538 aa14.84□□□□□ -0.03
LPP-203ENST00000416784 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
LPP-203ENST00000416784 ADAMTS12P58397 1594 aa14.82□□□□□ -0.04
LPP-203ENST00000416784 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
LPP-203ENST00000416784 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
LPP-203ENST00000416784 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
LPP-203ENST00000416784 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
LPP-203ENST00000416784 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
LPP-203ENST00000416784 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
LPP-203ENST00000416784 NUP160Q12769 1436 aa14.69□□□□□ -0.06
LPP-203ENST00000416784 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms