RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
HNRNPC-224ENST00000556226 ABCC9O60706 1549 aa22.19■■□□□ 1.14
HNRNPC-224ENST00000556226 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
HNRNPC-224ENST00000556226 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
HNRNPC-224ENST00000556226 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
HNRNPC-224ENST00000556226 NACADO15069 1562 aa20.85■□□□□ 0.93
HNRNPC-224ENST00000556226 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
HNRNPC-224ENST00000556226 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
HNRNPC-224ENST00000556226 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
HNRNPC-224ENST00000556226 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
HNRNPC-224ENST00000556226 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
HNRNPC-224ENST00000556226 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
HNRNPC-224ENST00000556226 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
HNRNPC-224ENST00000556226 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
HNRNPC-224ENST00000556226 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
HNRNPC-224ENST00000556226 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
HNRNPC-224ENST00000556226 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
HNRNPC-224ENST00000556226 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
HNRNPC-224ENST00000556226 NCAPD3P42695 1498 aa19.27■□□□□ 0.67
HNRNPC-224ENST00000556226 DNAJC5Q9H3Z4 198 aa19.26■□□□□ 0.67
HNRNPC-224ENST00000556226 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
HNRNPC-224ENST00000556226 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
HNRNPC-224ENST00000556226 CUX2O14529 1486 aa19.13■□□□□ 0.65
HNRNPC-224ENST00000556226 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
HNRNPC-224ENST00000556226 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
HNRNPC-224ENST00000556226 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
HNRNPC-224ENST00000556226 NESP48681 1621 aa19.06■□□□□ 0.64
HNRNPC-224ENST00000556226 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
HNRNPC-224ENST00000556226 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
HNRNPC-224ENST00000556226 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
HNRNPC-224ENST00000556226 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
HNRNPC-224ENST00000556226 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
HNRNPC-224ENST00000556226 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
HNRNPC-224ENST00000556226 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
HNRNPC-224ENST00000556226 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
HNRNPC-224ENST00000556226 WIZO95785 1651 aa18.69■□□□□ 0.58
HNRNPC-224ENST00000556226 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
HNRNPC-224ENST00000556226 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
HNRNPC-224ENST00000556226 WDR62O43379 1518 aa18.57■□□□□ 0.56
HNRNPC-224ENST00000556226 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
HNRNPC-224ENST00000556226 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
HNRNPC-224ENST00000556226 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
HNRNPC-224ENST00000556226 CFTRP13569 1480 aa18.45■□□□□ 0.54
HNRNPC-224ENST00000556226 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
HNRNPC-224ENST00000556226 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
HNRNPC-224ENST00000556226 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
HNRNPC-224ENST00000556226 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
HNRNPC-224ENST00000556226 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
HNRNPC-224ENST00000556226 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
HNRNPC-224ENST00000556226 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
HNRNPC-224ENST00000556226 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
HNRNPC-224ENST00000556226 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
HNRNPC-224ENST00000556226 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
HNRNPC-224ENST00000556226 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
HNRNPC-224ENST00000556226 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
HNRNPC-224ENST00000556226 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-224ENST00000556226 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
HNRNPC-224ENST00000556226 ABCC8Q09428 1581 aa18■□□□□ 0.47
HNRNPC-224ENST00000556226 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
HNRNPC-224ENST00000556226 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
HNRNPC-224ENST00000556226 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.464e-7■■■■■ 28.5
HNRNPC-224ENST00000556226 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
HNRNPC-224ENST00000556226 CHD1O14646 1710 aa17.92■□□□□ 0.46
HNRNPC-224ENST00000556226 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
HNRNPC-224ENST00000556226 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
HNRNPC-224ENST00000556226 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
HNRNPC-224ENST00000556226 SOGA1O94964 1423 aa17.81■□□□□ 0.44
HNRNPC-224ENST00000556226 FBLN2P98095 1184 aa17.81■□□□□ 0.44
HNRNPC-224ENST00000556226 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
HNRNPC-224ENST00000556226 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
HNRNPC-224ENST00000556226 CUX1P39880 1505 aa17.79■□□□□ 0.44
HNRNPC-224ENST00000556226 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
HNRNPC-224ENST00000556226 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
HNRNPC-224ENST00000556226 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
HNRNPC-224ENST00000556226 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
HNRNPC-224ENST00000556226 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
HNRNPC-224ENST00000556226 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
HNRNPC-224ENST00000556226 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
HNRNPC-224ENST00000556226 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
HNRNPC-224ENST00000556226 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
HNRNPC-224ENST00000556226 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
HNRNPC-224ENST00000556226 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
HNRNPC-224ENST00000556226 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
HNRNPC-224ENST00000556226 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
HNRNPC-224ENST00000556226 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
HNRNPC-224ENST00000556226 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
HNRNPC-224ENST00000556226 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
HNRNPC-224ENST00000556226 ADAMTS12P58397 1594 aa17.47■□□□□ 0.39
HNRNPC-224ENST00000556226 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
HNRNPC-224ENST00000556226 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
HNRNPC-224ENST00000556226 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
HNRNPC-224ENST00000556226 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
HNRNPC-224ENST00000556226 NUP160Q12769 1436 aa17.42■□□□□ 0.38
HNRNPC-224ENST00000556226 FHAD1B1AJZ9 1412 aa17.37■□□□□ 0.37
HNRNPC-224ENST00000556226 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
HNRNPC-224ENST00000556226 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
HNRNPC-224ENST00000556226 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
HNRNPC-224ENST00000556226 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
HNRNPC-224ENST00000556226 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
HNRNPC-224ENST00000556226 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
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