RNA–Protein interactions for RNA: ENST00000333972.11

ARHGEF25-202, Transcript of Rho guanine nucleotide exchange factor 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF25, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF25-202ENST00000333972 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
ARHGEF25-202ENST00000333972 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
ARHGEF25-202ENST00000333972 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
ARHGEF25-202ENST00000333972 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
ARHGEF25-202ENST00000333972 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
ARHGEF25-202ENST00000333972 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
ARHGEF25-202ENST00000333972 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
ARHGEF25-202ENST00000333972 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
ARHGEF25-202ENST00000333972 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
ARHGEF25-202ENST00000333972 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
ARHGEF25-202ENST00000333972 ABCC9O60706 1549 aa27.62■■■□□ 2.01
ARHGEF25-202ENST00000333972 NACADO15069 1562 aa27.4■■□□□ 1.98
ARHGEF25-202ENST00000333972 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.98
ARHGEF25-202ENST00000333972 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
ARHGEF25-202ENST00000333972 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
ARHGEF25-202ENST00000333972 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
ARHGEF25-202ENST00000333972 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
ARHGEF25-202ENST00000333972 WIZO95785 1651 aa26.79■■□□□ 1.88
ARHGEF25-202ENST00000333972 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
ARHGEF25-202ENST00000333972 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
ARHGEF25-202ENST00000333972 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
ARHGEF25-202ENST00000333972 HRCP23327 699 aa26.63■■□□□ 1.85
ARHGEF25-202ENST00000333972 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
ARHGEF25-202ENST00000333972 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
ARHGEF25-202ENST00000333972 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
ARHGEF25-202ENST00000333972 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
ARHGEF25-202ENST00000333972 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
ARHGEF25-202ENST00000333972 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
ARHGEF25-202ENST00000333972 TRIM26Q12899 539 aaPredicted RBP26.29■■□□□ 1.8
ARHGEF25-202ENST00000333972 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
ARHGEF25-202ENST00000333972 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
ARHGEF25-202ENST00000333972 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
ARHGEF25-202ENST00000333972 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
ARHGEF25-202ENST00000333972 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
ARHGEF25-202ENST00000333972 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
ARHGEF25-202ENST00000333972 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
ARHGEF25-202ENST00000333972 SOGA1O94964 1423 aa25.83■■□□□ 1.73
ARHGEF25-202ENST00000333972 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.72
ARHGEF25-202ENST00000333972 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
ARHGEF25-202ENST00000333972 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
ARHGEF25-202ENST00000333972 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
ARHGEF25-202ENST00000333972 EEA1Q15075 1411 aa25.68■■□□□ 1.7
ARHGEF25-202ENST00000333972 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.7
ARHGEF25-202ENST00000333972 TNIKQ9UKE5 1360 aa25.61■■□□□ 1.69
ARHGEF25-202ENST00000333972 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
ARHGEF25-202ENST00000333972 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
ARHGEF25-202ENST00000333972 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF25-202ENST00000333972 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
ARHGEF25-202ENST00000333972 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
ARHGEF25-202ENST00000333972 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
ARHGEF25-202ENST00000333972 KIF21BO75037 1637 aa25.36■■□□□ 1.65
ARHGEF25-202ENST00000333972 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
ARHGEF25-202ENST00000333972 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
ARHGEF25-202ENST00000333972 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
ARHGEF25-202ENST00000333972 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
ARHGEF25-202ENST00000333972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
ARHGEF25-202ENST00000333972 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
ARHGEF25-202ENST00000333972 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
ARHGEF25-202ENST00000333972 CLIP1P30622 1438 aa25.15■■□□□ 1.62
ARHGEF25-202ENST00000333972 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
ARHGEF25-202ENST00000333972 CFTRP13569 1480 aa25.12■■□□□ 1.61
ARHGEF25-202ENST00000333972 CUX1P39880 1505 aa25.11■■□□□ 1.61
ARHGEF25-202ENST00000333972 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
ARHGEF25-202ENST00000333972 PRXQ9BXM0 1461 aa25.03■■□□□ 1.6
ARHGEF25-202ENST00000333972 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
ARHGEF25-202ENST00000333972 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
ARHGEF25-202ENST00000333972 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
ARHGEF25-202ENST00000333972 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
ARHGEF25-202ENST00000333972 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
ARHGEF25-202ENST00000333972 ARAP1Q96P48 1450 aa24.83■■□□□ 1.56
ARHGEF25-202ENST00000333972 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
ARHGEF25-202ENST00000333972 APLP2Q06481 763 aa24.78■■□□□ 1.56
ARHGEF25-202ENST00000333972 HNRNPUL2Q1KMD3 747 aaKnown RBP24.76■■□□□ 1.55
ARHGEF25-202ENST00000333972 IGF1RP08069 1367 aa24.7■■□□□ 1.54
ARHGEF25-202ENST00000333972 CUX2O14529 1486 aa24.69■■□□□ 1.54
ARHGEF25-202ENST00000333972 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
ARHGEF25-202ENST00000333972 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
ARHGEF25-202ENST00000333972 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.54
ARHGEF25-202ENST00000333972 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
ARHGEF25-202ENST00000333972 DIEXFQ68CQ4 756 aaKnown RBP24.55■■□□□ 1.52
ARHGEF25-202ENST00000333972 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
ARHGEF25-202ENST00000333972 NESP48681 1621 aa24.47■■□□□ 1.51
ARHGEF25-202ENST00000333972 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
ARHGEF25-202ENST00000333972 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
ARHGEF25-202ENST00000333972 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
ARHGEF25-202ENST00000333972 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
ARHGEF25-202ENST00000333972 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
ARHGEF25-202ENST00000333972 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
ARHGEF25-202ENST00000333972 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
ARHGEF25-202ENST00000333972 SCAF1Q9H7N4 1312 aaKnown RBP24.39■■□□□ 1.49
ARHGEF25-202ENST00000333972 DHX57Q6P158 1386 aaKnown RBP24.36■■□□□ 1.49
ARHGEF25-202ENST00000333972 MAP3K1Q13233 1512 aa24.34■■□□□ 1.49
ARHGEF25-202ENST00000333972 CCNB3Q8WWL7 1395 aa24.33■■□□□ 1.49
ARHGEF25-202ENST00000333972 TIAM1Q13009 1591 aa24.33■■□□□ 1.48
ARHGEF25-202ENST00000333972 CLSPNQ9HAW4 1339 aa24.3■■□□□ 1.48
ARHGEF25-202ENST00000333972 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
ARHGEF25-202ENST00000333972 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
ARHGEF25-202ENST00000333972 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
ARHGEF25-202ENST00000333972 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
ARHGEF25-202ENST00000333972 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms