RNA–Protein interactions for RNA: ENST00000414139.5

LPP-201, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 4

Gene LPP, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-201ENST00000414139 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
LPP-201ENST00000414139 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
LPP-201ENST00000414139 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
LPP-201ENST00000414139 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
LPP-201ENST00000414139 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
LPP-201ENST00000414139 FOXD1Q16676 465 aa15.53■□□□□ 0.08
LPP-201ENST00000414139 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
LPP-201ENST00000414139 ABCC9O60706 1549 aa15.12■□□□□ 0.01
LPP-201ENST00000414139 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
LPP-201ENST00000414139 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
LPP-201ENST00000414139 ADRA2BP18089 450 aa14.82□□□□□ -0.04
LPP-201ENST00000414139 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
LPP-201ENST00000414139 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
LPP-201ENST00000414139 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.1
LPP-201ENST00000414139 MSH5O43196 834 aa14.38□□□□□ -0.11
LPP-201ENST00000414139 NACADO15069 1562 aa14.3□□□□□ -0.12
LPP-201ENST00000414139 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
LPP-201ENST00000414139 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
LPP-201ENST00000414139 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
LPP-201ENST00000414139 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
LPP-201ENST00000414139 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
LPP-201ENST00000414139 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
LPP-201ENST00000414139 BICRAQ9NZM4 1560 aa13.9□□□□□ -0.18
LPP-201ENST00000414139 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
LPP-201ENST00000414139 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
LPP-201ENST00000414139 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
LPP-201ENST00000414139 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
LPP-201ENST00000414139 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
LPP-201ENST00000414139 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
LPP-201ENST00000414139 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
LPP-201ENST00000414139 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
LPP-201ENST00000414139 KCNA4P22459 653 aa13.4□□□□□ -0.26
LPP-201ENST00000414139 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
LPP-201ENST00000414139 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
LPP-201ENST00000414139 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
LPP-201ENST00000414139 POTEDQ86YR6 584 aa13.25□□□□□ -0.29
LPP-201ENST00000414139 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
LPP-201ENST00000414139 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
LPP-201ENST00000414139 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
LPP-201ENST00000414139 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
LPP-201ENST00000414139 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
LPP-201ENST00000414139 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
LPP-201ENST00000414139 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
LPP-201ENST00000414139 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
LPP-201ENST00000414139 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
LPP-201ENST00000414139 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
LPP-201ENST00000414139 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
LPP-201ENST00000414139 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
LPP-201ENST00000414139 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
LPP-201ENST00000414139 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
LPP-201ENST00000414139 NESP48681 1621 aa12.98□□□□□ -0.33
LPP-201ENST00000414139 CUX2O14529 1486 aa12.97□□□□□ -0.33
LPP-201ENST00000414139 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
LPP-201ENST00000414139 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
LPP-201ENST00000414139 WIZO95785 1651 aa12.89□□□□□ -0.35
LPP-201ENST00000414139 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
LPP-201ENST00000414139 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
LPP-201ENST00000414139 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
LPP-201ENST00000414139 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LPP-201ENST00000414139 THOC2Q8NI27 1593 aaKnown RBP12.79□□□□□ -0.36
LPP-201ENST00000414139 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
LPP-201ENST00000414139 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
LPP-201ENST00000414139 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
LPP-201ENST00000414139 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
LPP-201ENST00000414139 FANCD2Q9BXW9 1451 aa12.69□□□□□ -0.38
LPP-201ENST00000414139 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
LPP-201ENST00000414139 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
LPP-201ENST00000414139 CFTRP13569 1480 aa12.65□□□□□ -0.38
LPP-201ENST00000414139 WDR62O43379 1518 aa12.65□□□□□ -0.38
LPP-201ENST00000414139 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
LPP-201ENST00000414139 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
LPP-201ENST00000414139 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
LPP-201ENST00000414139 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
LPP-201ENST00000414139 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
LPP-201ENST00000414139 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
LPP-201ENST00000414139 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
LPP-201ENST00000414139 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
LPP-201ENST00000414139 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
LPP-201ENST00000414139 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
LPP-201ENST00000414139 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
LPP-201ENST00000414139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.43
LPP-201ENST00000414139 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
LPP-201ENST00000414139 FBLN2P98095 1184 aa12.33□□□□□ -0.44
LPP-201ENST00000414139 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
LPP-201ENST00000414139 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
LPP-201ENST00000414139 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
LPP-201ENST00000414139 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.44
LPP-201ENST00000414139 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
LPP-201ENST00000414139 SOGA1O94964 1423 aa12.29□□□□□ -0.44
LPP-201ENST00000414139 ZBTB22O15209 634 aa12.29□□□□□ -0.44
LPP-201ENST00000414139 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
LPP-201ENST00000414139 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
LPP-201ENST00000414139 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
LPP-201ENST00000414139 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
LPP-201ENST00000414139 CUX1P39880 1505 aa12.24□□□□□ -0.45
LPP-201ENST00000414139 CHD1O14646 1710 aa12.23□□□□□ -0.45
LPP-201ENST00000414139 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
LPP-201ENST00000414139 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
LPP-201ENST00000414139 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
LPP-201ENST00000414139 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms