RNA–Protein interactions for RNA: ENST00000496131.1

ATP6V0B-209, Transcript of ATPase H+ transporting V0 subunit b, humanhuman

TSL 3

Gene ATP6V0B, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0B-209ENST00000496131 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
ATP6V0B-209ENST00000496131 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
ATP6V0B-209ENST00000496131 ABCC9O60706 1549 aa30.57■■■□□ 2.48
ATP6V0B-209ENST00000496131 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
ATP6V0B-209ENST00000496131 NACADO15069 1562 aa29.14■■■□□ 2.26
ATP6V0B-209ENST00000496131 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
ATP6V0B-209ENST00000496131 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
ATP6V0B-209ENST00000496131 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
ATP6V0B-209ENST00000496131 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
ATP6V0B-209ENST00000496131 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
ATP6V0B-209ENST00000496131 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
ATP6V0B-209ENST00000496131 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.13
ATP6V0B-209ENST00000496131 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
ATP6V0B-209ENST00000496131 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
ATP6V0B-209ENST00000496131 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
ATP6V0B-209ENST00000496131 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
ATP6V0B-209ENST00000496131 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
ATP6V0B-209ENST00000496131 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
ATP6V0B-209ENST00000496131 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
ATP6V0B-209ENST00000496131 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
ATP6V0B-209ENST00000496131 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
ATP6V0B-209ENST00000496131 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
ATP6V0B-209ENST00000496131 SMARCA2P51531 1590 aa26.79■■□□□ 1.88
ATP6V0B-209ENST00000496131 HMGXB3Q12766 1538 aa26.77■■□□□ 1.88
ATP6V0B-209ENST00000496131 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
ATP6V0B-209ENST00000496131 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
ATP6V0B-209ENST00000496131 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
ATP6V0B-209ENST00000496131 WIZO95785 1651 aa26.38■■□□□ 1.81
ATP6V0B-209ENST00000496131 NESP48681 1621 aa26.37■■□□□ 1.81
ATP6V0B-209ENST00000496131 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
ATP6V0B-209ENST00000496131 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
ATP6V0B-209ENST00000496131 CUX2O14529 1486 aa26.26■■□□□ 1.79
ATP6V0B-209ENST00000496131 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
ATP6V0B-209ENST00000496131 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
ATP6V0B-209ENST00000496131 RSF1Q96T23 1441 aaPredicted RBP26.09■■□□□ 1.77
ATP6V0B-209ENST00000496131 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
ATP6V0B-209ENST00000496131 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
ATP6V0B-209ENST00000496131 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
ATP6V0B-209ENST00000496131 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
ATP6V0B-209ENST00000496131 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
ATP6V0B-209ENST00000496131 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
ATP6V0B-209ENST00000496131 WDR62O43379 1518 aa25.82■■□□□ 1.72
ATP6V0B-209ENST00000496131 CFTRP13569 1480 aa25.81■■□□□ 1.72
ATP6V0B-209ENST00000496131 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
ATP6V0B-209ENST00000496131 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
ATP6V0B-209ENST00000496131 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
ATP6V0B-209ENST00000496131 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
ATP6V0B-209ENST00000496131 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
ATP6V0B-209ENST00000496131 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
ATP6V0B-209ENST00000496131 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
ATP6V0B-209ENST00000496131 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
ATP6V0B-209ENST00000496131 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
ATP6V0B-209ENST00000496131 TARBP1Q13395 1621 aaKnown RBP25.17■■□□□ 1.62
ATP6V0B-209ENST00000496131 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
ATP6V0B-209ENST00000496131 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
ATP6V0B-209ENST00000496131 CUX1P39880 1505 aa25.01■■□□□ 1.59
ATP6V0B-209ENST00000496131 CHD1O14646 1710 aa25■■□□□ 1.59
ATP6V0B-209ENST00000496131 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
ATP6V0B-209ENST00000496131 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
ATP6V0B-209ENST00000496131 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
ATP6V0B-209ENST00000496131 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
ATP6V0B-209ENST00000496131 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
ATP6V0B-209ENST00000496131 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.589e-10■■■■■ 42.9
ATP6V0B-209ENST00000496131 SOGA1O94964 1423 aa24.86■■□□□ 1.57
ATP6V0B-209ENST00000496131 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
ATP6V0B-209ENST00000496131 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
ATP6V0B-209ENST00000496131 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
ATP6V0B-209ENST00000496131 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
ATP6V0B-209ENST00000496131 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
ATP6V0B-209ENST00000496131 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
ATP6V0B-209ENST00000496131 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
ATP6V0B-209ENST00000496131 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
ATP6V0B-209ENST00000496131 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
ATP6V0B-209ENST00000496131 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
ATP6V0B-209ENST00000496131 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
ATP6V0B-209ENST00000496131 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
ATP6V0B-209ENST00000496131 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
ATP6V0B-209ENST00000496131 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
ATP6V0B-209ENST00000496131 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
ATP6V0B-209ENST00000496131 CLASP1Q7Z460 1538 aa24.63■■□□□ 1.53
ATP6V0B-209ENST00000496131 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
ATP6V0B-209ENST00000496131 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
ATP6V0B-209ENST00000496131 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
ATP6V0B-209ENST00000496131 FBLN2P98095 1184 aa24.56■■□□□ 1.52
ATP6V0B-209ENST00000496131 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
ATP6V0B-209ENST00000496131 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
ATP6V0B-209ENST00000496131 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
ATP6V0B-209ENST00000496131 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
ATP6V0B-209ENST00000496131 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
ATP6V0B-209ENST00000496131 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
ATP6V0B-209ENST00000496131 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
ATP6V0B-209ENST00000496131 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
ATP6V0B-209ENST00000496131 NUP160Q12769 1436 aa24.3■■□□□ 1.48
ATP6V0B-209ENST00000496131 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
ATP6V0B-209ENST00000496131 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
ATP6V0B-209ENST00000496131 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
ATP6V0B-209ENST00000496131 CUL7Q14999 1698 aa24.18■■□□□ 1.46
ATP6V0B-209ENST00000496131 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
ATP6V0B-209ENST00000496131 IGF1RP08069 1367 aa24.03■■□□□ 1.44
ATP6V0B-209ENST00000496131 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms