RNA–Protein interactions for RNA: ENST00000531165.5

CELF1-214, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 2 BASIC

Gene CELF1, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-214ENST00000531165 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
CELF1-214ENST00000531165 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
CELF1-214ENST00000531165 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
CELF1-214ENST00000531165 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
CELF1-214ENST00000531165 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
CELF1-214ENST00000531165 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
CELF1-214ENST00000531165 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
CELF1-214ENST00000531165 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
CELF1-214ENST00000531165 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
CELF1-214ENST00000531165 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
CELF1-214ENST00000531165 ABCC9O60706 1549 aa24.07■■□□□ 1.44
CELF1-214ENST00000531165 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
CELF1-214ENST00000531165 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
CELF1-214ENST00000531165 PCGF6Q9BYE7 350 aa23.76■■□□□ 1.39
CELF1-214ENST00000531165 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
CELF1-214ENST00000531165 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
CELF1-214ENST00000531165 HRCP23327 699 aa23.63■■□□□ 1.37
CELF1-214ENST00000531165 NACADO15069 1562 aa23.59■■□□□ 1.37
CELF1-214ENST00000531165 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.36
CELF1-214ENST00000531165 WIZO95785 1651 aa23.48■■□□□ 1.35
CELF1-214ENST00000531165 PPARGC1BQ86YN6 1023 aaKnown RBP23.47■■□□□ 1.35
CELF1-214ENST00000531165 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
CELF1-214ENST00000531165 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
CELF1-214ENST00000531165 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
CELF1-214ENST00000531165 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
CELF1-214ENST00000531165 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
CELF1-214ENST00000531165 EIF4G1Q04637 1599 aaKnown RBP23.13■■□□□ 1.29
CELF1-214ENST00000531165 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
CELF1-214ENST00000531165 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
CELF1-214ENST00000531165 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
CELF1-214ENST00000531165 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
CELF1-214ENST00000531165 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
CELF1-214ENST00000531165 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
CELF1-214ENST00000531165 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
CELF1-214ENST00000531165 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
CELF1-214ENST00000531165 SOGA1O94964 1423 aa22.72■■□□□ 1.23
CELF1-214ENST00000531165 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
CELF1-214ENST00000531165 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
CELF1-214ENST00000531165 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
CELF1-214ENST00000531165 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
CELF1-214ENST00000531165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
CELF1-214ENST00000531165 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
CELF1-214ENST00000531165 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
CELF1-214ENST00000531165 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
CELF1-214ENST00000531165 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
CELF1-214ENST00000531165 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
CELF1-214ENST00000531165 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.16
CELF1-214ENST00000531165 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
CELF1-214ENST00000531165 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
CELF1-214ENST00000531165 EEA1Q15075 1411 aa22.2■■□□□ 1.14
CELF1-214ENST00000531165 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
CELF1-214ENST00000531165 CCER1Q8TC90 406 aaPredicted RBP22.17■■□□□ 1.14
CELF1-214ENST00000531165 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
CELF1-214ENST00000531165 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
CELF1-214ENST00000531165 KIF21BO75037 1637 aa22.08■■□□□ 1.12
CELF1-214ENST00000531165 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
CELF1-214ENST00000531165 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
CELF1-214ENST00000531165 CLIP1P30622 1438 aa22■■□□□ 1.11
CELF1-214ENST00000531165 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
CELF1-214ENST00000531165 CUX1P39880 1505 aa21.92■■□□□ 1.1
CELF1-214ENST00000531165 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
CELF1-214ENST00000531165 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
CELF1-214ENST00000531165 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
CELF1-214ENST00000531165 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
CELF1-214ENST00000531165 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
CELF1-214ENST00000531165 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
CELF1-214ENST00000531165 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
CELF1-214ENST00000531165 CFTRP13569 1480 aa21.77■■□□□ 1.08
CELF1-214ENST00000531165 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
CELF1-214ENST00000531165 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
CELF1-214ENST00000531165 ERICH3Q5RHP9 1530 aa21.69■■□□□ 1.06
CELF1-214ENST00000531165 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
CELF1-214ENST00000531165 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
CELF1-214ENST00000531165 ARHGAP35Q9NRY4 1499 aa21.57■■□□□ 1.04
CELF1-214ENST00000531165 APLP2Q06481 763 aa21.57■■□□□ 1.04
CELF1-214ENST00000531165 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
CELF1-214ENST00000531165 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
CELF1-214ENST00000531165 IGF1RP08069 1367 aa21.53■■□□□ 1.04
CELF1-214ENST00000531165 CUX2O14529 1486 aa21.52■■□□□ 1.04
CELF1-214ENST00000531165 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
CELF1-214ENST00000531165 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
CELF1-214ENST00000531165 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
CELF1-214ENST00000531165 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
CELF1-214ENST00000531165 DHX57Q6P158 1386 aaKnown RBP21.44■■□□□ 1.02
CELF1-214ENST00000531165 MIER1Q8N108 512 aa21.42■■□□□ 1.02
CELF1-214ENST00000531165 NESP48681 1621 aa21.41■■□□□ 1.02
CELF1-214ENST00000531165 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
CELF1-214ENST00000531165 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
CELF1-214ENST00000531165 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
CELF1-214ENST00000531165 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
CELF1-214ENST00000531165 ITGAEP38570 1179 aa21.35■■□□□ 1.01
CELF1-214ENST00000531165 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
CELF1-214ENST00000531165 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
CELF1-214ENST00000531165 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
CELF1-214ENST00000531165 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
CELF1-214ENST00000531165 CCNB3Q8WWL7 1395 aa21.28■■□□□ 1
CELF1-214ENST00000531165 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
CELF1-214ENST00000531165 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
CELF1-214ENST00000531165 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
CELF1-214ENST00000531165 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms