Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 UROD-209ENST00000465678 756 ntTSL 212.57□□□□□ -0.49e-11■■■□□ 16.2
RPS3P23396 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC10.61□□□□□ -0.711e-7■■■□□ 16.2
RPS3P23396 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.821e-7■■■□□ 16.2
RPS3P23396 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.732e-9■■■□□ 16.2
RPS3P23396 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.98■□□□□ 0.155e-7■■■□□ 16.2
RPS3P23396 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.68□□□□□ -1.181e-7■■■□□ 16.2
RPS3P23396 E4F1-202ENST00000562589 817 ntTSL 524.48■■□□□ 1.513e-9■■■□□ 16.2
RPS3P23396 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.6■□□□□ 0.893e-9■■■□□ 16.2
RPS3P23396 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.75■□□□□ 0.753e-9■■■□□ 16.2
RPS3P23396 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.623e-9■■■□□ 16.2
RPS3P23396 E4F1-207ENST00000565413 940 ntTSL 318.93■□□□□ 0.623e-9■■■□□ 16.2
RPS3P23396 EPB41-210ENST00000482464 675 ntTSL 217.13■□□□□ 0.333e-9■■■□□ 16.2
RPS3P23396 E4F1-209ENST00000569796 5931 ntTSL 216.41■□□□□ 0.223e-9■■■□□ 16.2
RPS3P23396 KDM4B-206ENST00000588361 3039 ntTSL 214.87□□□□□ -0.033e-9■■■□□ 16.2
RPS3P23396 KDM4B-204ENST00000588166 477 ntTSL 514.29□□□□□ -0.123e-9■■■□□ 16.2
RPS3P23396 ITGA5-211ENST00000552564 4996 ntTSL 213.57□□□□□ -0.243e-9■■■□□ 16.2
RPS3P23396 IGSF8-203ENST00000448417 1059 ntAPPRIS ALT2 TSL 220.53■□□□□ 0.882e-6■■■□□ 16.2
RPS3P23396 IGSF8-204ENST00000460351 876 ntTSL 214.53□□□□□ -0.082e-6■■■□□ 16.2
RPS3P23396 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.377e-8■■■□□ 16.2
RPS3P23396 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.317e-8■■■□□ 16.2
RPS3P23396 KPNB1-205ENST00000577918 859 ntTSL 314.31□□□□□ -0.122e-7■■■□□ 16.2
RPS3P23396 KPNB1-204ENST00000577875 605 ntTSL 34.27□□□□□ -1.732e-7■■■□□ 16.2
RPS3P23396 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.362e-6■■■□□ 16.2
RPS3P23396 ABCC10-207ENST00000463024 4542 ntTSL 213.01□□□□□ -0.332e-6■■■□□ 16.2
RPS3P23396 ABCC10-202ENST00000372512 405 ntTSL 311.94□□□□□ -0.52e-6■■■□□ 16.2
RPS3P23396 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.829e-7■■■□□ 16.2
RPS3P23396 SPTAN1-217ENST00000629089 1546 ntTSL 217.44■□□□□ 0.384e-8■■■□□ 16.2
RPS3P23396 SPTAN1-214ENST00000628614 993 ntTSL 1 (best)16.63■□□□□ 0.254e-8■■■□□ 16.2
RPS3P23396 APP-213ENST00000464867 816 ntTSL 1 (best)8.51□□□□□ -1.057e-8■■■□□ 16.2
RPS3P23396 SNRNP200-207ENST00000493271 585 ntTSL 310.43□□□□□ -0.742e-9■■■□□ 16.2
RPS3P23396 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.244e-7■■■□□ 16.2
RPS3P23396 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)22.2■■□□□ 1.154e-7■■■□□ 16.2
RPS3P23396 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.15■■□□□ 1.144e-7■■■□□ 16.2
RPS3P23396 SNRNP70-209ENST00000601065 1757 ntTSL 321.82■■□□□ 1.084e-7■■■□□ 16.2
RPS3P23396 SNRNP70-202ENST00000401730 3144 ntTSL 216.49■□□□□ 0.234e-7■■■□□ 16.2
RPS3P23396 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.52■□□□□ 0.721e-7■■■□□ 16.2
RPS3P23396 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.171e-7■■■□□ 16.2
RPS3P23396 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.7■□□□□ 0.11e-7■■■□□ 16.2
RPS3P23396 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.97□□□□□ -0.011e-7■■■□□ 16.2
RPS3P23396 RETSAT-206ENST00000482694 601 ntTSL 24.8□□□□□ -1.645e-8■■■□□ 16.2
RPS3P23396 AK2-205ENST00000469238 423 ntTSL 26.58□□□□□ -1.366e-7■■■□□ 16.2
RPS3P23396 AK2-203ENST00000466029 223 ntTSL 34.59□□□□□ -1.676e-7■■■□□ 16.2
RPS3P23396 DDB1-221ENST00000543162 575 ntTSL 410.57□□□□□ -0.725e-7■■■□□ 16.2
RPS3P23396 DDB1-208ENST00000537120 1215 ntTSL 28.05□□□□□ -1.125e-7■■■□□ 16.2
RPS3P23396 ITM2B-204ENST00000607866 596 ntTSL 35.68□□□□□ -1.56e-11■■■□□ 16.2
RPS3P23396 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.84e-8■■■□□ 16.2
RPS3P23396 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.87■□□□□ 0.774e-8■■■□□ 16.2
RPS3P23396 PPP1CA-209ENST00000537694 882 ntTSL 514.65□□□□□ -0.064e-8■■■□□ 16.2
RPS3P23396 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.144e-8■■■□□ 16.2
RPS3P23396 PPP1CA-205ENST00000527663 765 ntTSL 39.15□□□□□ -0.944e-8■■■□□ 16.2
RPS3P23396 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.973e-9■■■□□ 16.2
RPS3P23396 SNW1-206ENST00000556428 1966 ntTSL 26.99□□□□□ -1.293e-9■■■□□ 16.2
RPS3P23396 ACAT1-210ENST00000533597 558 ntTSL 25.97□□□□□ -1.453e-9■■■□□ 16.2
RPS3P23396 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.92□□□□□ -1.463e-9■■■□□ 16.2
RPS3P23396 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.79□□□□□ -1.483e-9■■■□□ 16.2
RPS3P23396 SNW1-207ENST00000557663 602 ntTSL 22.96□□□□□ -1.943e-9■■■□□ 16.2
RPS3P23396 SNW1-203ENST00000554324 584 ntTSL 52.89□□□□□ -1.953e-9■■■□□ 16.2
RPS3P23396 VKORC1-207ENST00000472468 461 ntTSL 216.67■□□□□ 0.262e-9■■■□□ 16.2
RPS3P23396 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.33e-23■■■□□ 16.2
RPS3P23396 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.393e-23■■■□□ 16.2
RPS3P23396 FAM178B-202ENST00000470789 722 ntTSL 1 (best)11.05□□□□□ -0.643e-23■■■□□ 16.2
RPS3P23396 VARS-221ENST00000463184 619 ntTSL 218.85■□□□□ 0.611e-8■■■□□ 16.2
RPS3P23396 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.182e-6■■■□□ 16.2
RPS3P23396 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.77□□□□□ -0.042e-6■■■□□ 16.2
RPS3P23396 TMEM258-203ENST00000535297 395 ntTSL 213.43□□□□□ -0.262e-6■■■□□ 16.2
RPS3P23396 TMEM258-208ENST00000545210 579 ntTSL 310.79□□□□□ -0.682e-6■■■□□ 16.2
RPS3P23396 TMEM258-201ENST00000257262 468 ntTSL 38.3□□□□□ -1.082e-6■■■□□ 16.2
RPS3P23396 TMEM258-206ENST00000541893 517 ntTSL 54.86□□□□□ -1.632e-6■■■□□ 16.2
RPS3P23396 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.852e-23■■■□□ 16.2
RPS3P23396 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.544e-19■■■□□ 16.2
RPS3P23396 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.522e-23■■■□□ 16.2
RPS3P23396 RPL29-208ENST00000492277 537 ntTSL 314.77□□□□□ -0.052e-23■■■□□ 16.2
RPS3P23396 RPL29-201ENST00000294189 723 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.84e-19■■■□□ 16.2
RPS3P23396 RPL29-205ENST00000480306 719 ntTSL 28.48□□□□□ -1.054e-19■■■□□ 16.2
RPS3P23396 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.762e-23■■■□□ 16.2
RPS3P23396 EIF3M-210ENST00000531921 1697 ntTSL 217.24■□□□□ 0.355e-7■■■□□ 16.2
RPS3P23396 EIF3M-201ENST00000323213 889 ntTSL 515.16■□□□□ 0.025e-7■■■□□ 16.2
RPS3P23396 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.64□□□□□ -0.235e-7■■■□□ 16.2
RPS3P23396 EIF3M-205ENST00000525782 2236 ntTSL 211.65□□□□□ -0.545e-7■■■□□ 16.2
RPS3P23396 EIF3M-202ENST00000524711 1645 ntTSL 29.79□□□□□ -0.845e-7■■■□□ 16.2
RPS3P23396 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.65e-7■■■□□ 16.2
RPS3P23396 SERPINA5-204ENST00000554220 586 ntTSL 49.92□□□□□ -0.822e-7■■■□□ 16.2
RPS3P23396 SLC38A10-204ENST00000539748 528 ntTSL 313.55□□□□□ -0.247e-7■■■□□ 16.2
RPS3P23396 DDB1-203ENST00000451943 1224 ntTSL 28.54□□□□□ -1.041e-7■■■□□ 16.2
RPS3P23396 MARS-216ENST00000549048 755 ntTSL 314.95□□□□□ -0.022e-7■■■□□ 16.2
RPS3P23396 HSPD1-212ENST00000482167 491 ntTSL 1 (best)1.16□□□□□ -2.224e-8■■■□□ 16.2
RPS3P23396 RARRES2-204ENST00000478771 1907 ntTSL 221.14■□□□□ 0.972e-7■■■□□ 16.2
RPS3P23396 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.92e-7■■■□□ 16.2
RPS3P23396 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.92e-7■■■□□ 16.2
RPS3P23396 RARRES2-203ENST00000467793 583 ntTSL 315.36■□□□□ 0.052e-7■■■□□ 16.2
RPS3P23396 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.293e-11■■■□□ 16.1
RPS3P23396 AC002985.1-202ENST00000593484 584 ntAPPRIS P1 TSL 512.83□□□□□ -0.363e-11■■■□□ 16.1
RPS3P23396 SQSTM1-215ENST00000514093 842 ntTSL 519.09■□□□□ 0.653e-7■■■□□ 16.1
RPS3P23396 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.561e-7■■■□□ 16.1
RPS3P23396 PCMT1-209ENST00000494411 600 ntTSL 418.57■□□□□ 0.565e-15■■■□□ 16.1
RPS3P23396 CALR-206ENST00000588454 776 ntTSL 310.43□□□□□ -0.749e-23■■■□□ 16.1
RPS3P23396 IDH1-209ENST00000484575 1044 ntTSL 24.44□□□□□ -1.72e-12■■■□□ 16.1
RPS3P23396 SORT1-203ENST00000471996 469 ntTSL 317.79■□□□□ 0.442e-15■■■□□ 16.1
RPS3P23396 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC11.73□□□□□ -0.536e-7■■■□□ 16.1
RPS3P23396 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.756e-7■■■□□ 16.1
Retrieved 100 of 24,271 protein–RNA pairs in 228.5 ms