RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
SPTAN1-214ENST00000628614 CCDC180Q9P1Z9 1646 aa37.92■■■■□ 3.66
SPTAN1-214ENST00000628614 ABCC9O60706 1549 aa37.47■■■■□ 3.59
SPTAN1-214ENST00000628614 RB1CC1Q8TDY2 1594 aa35.9■■■■□ 3.34
SPTAN1-214ENST00000628614 NACADO15069 1562 aa35.76■■■■□ 3.32
SPTAN1-214ENST00000628614 DCAF8L2P0C7V8 631 aa35.59■■■■□ 3.29
SPTAN1-214ENST00000628614 MYO15BQ96JP2 1530 aa35.43■■■■□ 3.26
SPTAN1-214ENST00000628614 ZCCHC6Q5VYS8 1495 aaKnown RBP35.28■■■■□ 3.24
SPTAN1-214ENST00000628614 DCAF1Q9Y4B6 1507 aa35.12■■■■□ 3.21
SPTAN1-214ENST00000628614 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
SPTAN1-214ENST00000628614 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
SPTAN1-214ENST00000628614 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
SPTAN1-214ENST00000628614 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
SPTAN1-214ENST00000628614 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
SPTAN1-214ENST00000628614 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
SPTAN1-214ENST00000628614 EIF4G1Q04637 1599 aaKnown RBP33.93■■■■□ 3.02
SPTAN1-214ENST00000628614 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
SPTAN1-214ENST00000628614 CECR2Q9BXF3 1484 aa33.73■■■□□ 2.99
SPTAN1-214ENST00000628614 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
SPTAN1-214ENST00000628614 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
SPTAN1-214ENST00000628614 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
SPTAN1-214ENST00000628614 BAZ1AQ9NRL2 1556 aaPredicted RBP32.93■■■□□ 2.86
SPTAN1-214ENST00000628614 SMARCA2P51531 1590 aa32.91■■■□□ 2.86
SPTAN1-214ENST00000628614 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
SPTAN1-214ENST00000628614 PEG3Q9GZU2 1588 aa32.71■■■□□ 2.83
SPTAN1-214ENST00000628614 MROH2BQ7Z745 1585 aa32.67■■■□□ 2.82
SPTAN1-214ENST00000628614 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
SPTAN1-214ENST00000628614 ERCC6Q03468 1493 aa32.36■■■□□ 2.77
SPTAN1-214ENST00000628614 WIZO95785 1651 aa32.29■■■□□ 2.76
SPTAN1-214ENST00000628614 NESP48681 1621 aa32.29■■■□□ 2.76
SPTAN1-214ENST00000628614 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
SPTAN1-214ENST00000628614 CUX2O14529 1486 aa32.18■■■□□ 2.74
SPTAN1-214ENST00000628614 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
SPTAN1-214ENST00000628614 CADPSQ9ULU8 1353 aa32.01■■■□□ 2.71
SPTAN1-214ENST00000628614 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
SPTAN1-214ENST00000628614 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
SPTAN1-214ENST00000628614 THOC2Q8NI27 1593 aaKnown RBP31.92■■■□□ 2.7
SPTAN1-214ENST00000628614 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
SPTAN1-214ENST00000628614 CFTRP13569 1480 aa31.74■■■□□ 2.67
SPTAN1-214ENST00000628614 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
SPTAN1-214ENST00000628614 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
SPTAN1-214ENST00000628614 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
SPTAN1-214ENST00000628614 DNAJC5Q9H3Z4 198 aa31.62■■■□□ 2.65
SPTAN1-214ENST00000628614 WDR62O43379 1518 aa31.59■■■□□ 2.65
SPTAN1-214ENST00000628614 CCDC88BA6NC98 1476 aa31.58■■■□□ 2.65
SPTAN1-214ENST00000628614 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
SPTAN1-214ENST00000628614 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
SPTAN1-214ENST00000628614 ABCC8Q09428 1581 aa31.09■■■□□ 2.57
SPTAN1-214ENST00000628614 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
SPTAN1-214ENST00000628614 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
SPTAN1-214ENST00000628614 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
SPTAN1-214ENST00000628614 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
SPTAN1-214ENST00000628614 ZNF608Q9ULD9 1512 aaPredicted RBP30.87■■■□□ 2.53
SPTAN1-214ENST00000628614 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
SPTAN1-214ENST00000628614 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.52
SPTAN1-214ENST00000628614 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
SPTAN1-214ENST00000628614 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
SPTAN1-214ENST00000628614 CUX1P39880 1505 aa30.69■■■□□ 2.5
SPTAN1-214ENST00000628614 SOGA1O94964 1423 aa30.66■■■□□ 2.5
SPTAN1-214ENST00000628614 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
SPTAN1-214ENST00000628614 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.55e-10■■■■■ 39.2
SPTAN1-214ENST00000628614 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
SPTAN1-214ENST00000628614 WDR97A6NE52 1622 aa30.55■■■□□ 2.48
SPTAN1-214ENST00000628614 TDRD9Q8NDG6 1382 aaKnown RBP30.53■■■□□ 2.48
SPTAN1-214ENST00000628614 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
SPTAN1-214ENST00000628614 CHD1O14646 1710 aa30.4■■■□□ 2.46
SPTAN1-214ENST00000628614 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
SPTAN1-214ENST00000628614 FBLN2P98095 1184 aa30.37■■■□□ 2.45
SPTAN1-214ENST00000628614 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
SPTAN1-214ENST00000628614 WRNQ14191 1432 aaPredicted RBP eCLIP30.36■■■□□ 2.45
SPTAN1-214ENST00000628614 ABCA10Q8WWZ4 1543 aa30.36■■■□□ 2.45
SPTAN1-214ENST00000628614 MAGI1Q96QZ7 1491 aaPredicted RBP30.34■■■□□ 2.45
SPTAN1-214ENST00000628614 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
SPTAN1-214ENST00000628614 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
SPTAN1-214ENST00000628614 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
SPTAN1-214ENST00000628614 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
SPTAN1-214ENST00000628614 RIMBP3CA6NJZ7 1639 aa30.28■■■□□ 2.44
SPTAN1-214ENST00000628614 RIMBP3BA6NNM3 1639 aa30.28■■■□□ 2.44
SPTAN1-214ENST00000628614 RIMBP3Q9UFD9 1639 aa30.28■■■□□ 2.44
SPTAN1-214ENST00000628614 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.44
SPTAN1-214ENST00000628614 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
SPTAN1-214ENST00000628614 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
SPTAN1-214ENST00000628614 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
SPTAN1-214ENST00000628614 SYNJ2O15056 1496 aa30.22■■■□□ 2.43
SPTAN1-214ENST00000628614 CLASP1Q7Z460 1538 aa30.11■■■□□ 2.41
SPTAN1-214ENST00000628614 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
SPTAN1-214ENST00000628614 ERICH3Q5RHP9 1530 aa30■■■□□ 2.39
SPTAN1-214ENST00000628614 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
SPTAN1-214ENST00000628614 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
SPTAN1-214ENST00000628614 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
SPTAN1-214ENST00000628614 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
SPTAN1-214ENST00000628614 NUP160Q12769 1436 aa29.86■■■□□ 2.37
SPTAN1-214ENST00000628614 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
SPTAN1-214ENST00000628614 KIF27Q86VH2 1401 aa29.77■■■□□ 2.36
SPTAN1-214ENST00000628614 IGF1RP08069 1367 aa29.67■■■□□ 2.34
SPTAN1-214ENST00000628614 SHROOM2Q13796 1616 aa29.66■■■□□ 2.34
SPTAN1-214ENST00000628614 CUL7Q14999 1698 aa29.64■■■□□ 2.34
SPTAN1-214ENST00000628614 ERCC6L2Q5T890 1561 aa29.61■■■□□ 2.33
SPTAN1-214ENST00000628614 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
SPTAN1-214ENST00000628614 JPH4Q96JJ6 628 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms