RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
DDB1-203ENST00000451943 ABCC9O60706 1549 aa16.67■□□□□ 0.26
DDB1-203ENST00000451943 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
DDB1-203ENST00000451943 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
DDB1-203ENST00000451943 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
DDB1-203ENST00000451943 NACADO15069 1562 aa15.79■□□□□ 0.12
DDB1-203ENST00000451943 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
DDB1-203ENST00000451943 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
DDB1-203ENST00000451943 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
DDB1-203ENST00000451943 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
DDB1-203ENST00000451943 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDB1-203ENST00000451943 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
DDB1-203ENST00000451943 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
DDB1-203ENST00000451943 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
DDB1-203ENST00000451943 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
DDB1-203ENST00000451943 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
DDB1-203ENST00000451943 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
DDB1-203ENST00000451943 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
DDB1-203ENST00000451943 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
DDB1-203ENST00000451943 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
DDB1-203ENST00000451943 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
DDB1-203ENST00000451943 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.05
DDB1-203ENST00000451943 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
DDB1-203ENST00000451943 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
DDB1-203ENST00000451943 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
DDB1-203ENST00000451943 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
DDB1-203ENST00000451943 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
DDB1-203ENST00000451943 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
DDB1-203ENST00000451943 WIZO95785 1651 aa14.47□□□□□ -0.09
DDB1-203ENST00000451943 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
DDB1-203ENST00000451943 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
DDB1-203ENST00000451943 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
DDB1-203ENST00000451943 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
DDB1-203ENST00000451943 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
DDB1-203ENST00000451943 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
DDB1-203ENST00000451943 NESP48681 1621 aa14.35□□□□□ -0.11
DDB1-203ENST00000451943 CUX2O14529 1486 aa14.34□□□□□ -0.11
DDB1-203ENST00000451943 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
DDB1-203ENST00000451943 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
DDB1-203ENST00000451943 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
DDB1-203ENST00000451943 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
DDB1-203ENST00000451943 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
DDB1-203ENST00000451943 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
DDB1-203ENST00000451943 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
DDB1-203ENST00000451943 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
DDB1-203ENST00000451943 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
DDB1-203ENST00000451943 CFTRP13569 1480 aa14□□□□□ -0.17
DDB1-203ENST00000451943 WDR62O43379 1518 aa13.98□□□□□ -0.17
DDB1-203ENST00000451943 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
DDB1-203ENST00000451943 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
DDB1-203ENST00000451943 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
DDB1-203ENST00000451943 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
DDB1-203ENST00000451943 EEA1Q15075 1411 aa13.88□□□□□ -0.19
DDB1-203ENST00000451943 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
DDB1-203ENST00000451943 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
DDB1-203ENST00000451943 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
DDB1-203ENST00000451943 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
DDB1-203ENST00000451943 SOGA1O94964 1423 aa13.78□□□□□ -0.2
DDB1-203ENST00000451943 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
DDB1-203ENST00000451943 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
DDB1-203ENST00000451943 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
DDB1-203ENST00000451943 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
DDB1-203ENST00000451943 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
DDB1-203ENST00000451943 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
DDB1-203ENST00000451943 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
DDB1-203ENST00000451943 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
DDB1-203ENST00000451943 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
DDB1-203ENST00000451943 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
DDB1-203ENST00000451943 CUX1P39880 1505 aa13.64□□□□□ -0.23
DDB1-203ENST00000451943 KIF21BO75037 1637 aa13.64□□□□□ -0.23
DDB1-203ENST00000451943 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
DDB1-203ENST00000451943 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
DDB1-203ENST00000451943 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
DDB1-203ENST00000451943 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■□□ 18.5
DDB1-203ENST00000451943 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
DDB1-203ENST00000451943 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
DDB1-203ENST00000451943 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
DDB1-203ENST00000451943 POLA1P09884 1462 aaPredicted RBP13.58□□□□□ -0.24
DDB1-203ENST00000451943 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
DDB1-203ENST00000451943 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
DDB1-203ENST00000451943 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
DDB1-203ENST00000451943 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
DDB1-203ENST00000451943 PRXQ9BXM0 1461 aa13.52□□□□□ -0.25
DDB1-203ENST00000451943 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
DDB1-203ENST00000451943 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
DDB1-203ENST00000451943 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
DDB1-203ENST00000451943 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
DDB1-203ENST00000451943 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
DDB1-203ENST00000451943 HRCP23327 699 aa13.49□□□□□ -0.25
DDB1-203ENST00000451943 FBLN2P98095 1184 aa13.49□□□□□ -0.25
DDB1-203ENST00000451943 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
DDB1-203ENST00000451943 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
DDB1-203ENST00000451943 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
DDB1-203ENST00000451943 CHD1O14646 1710 aa13.46□□□□□ -0.25
DDB1-203ENST00000451943 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
DDB1-203ENST00000451943 CLIP1P30622 1438 aa13.42□□□□□ -0.26
DDB1-203ENST00000451943 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
DDB1-203ENST00000451943 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
DDB1-203ENST00000451943 IGF1RP08069 1367 aa13.4□□□□□ -0.26
DDB1-203ENST00000451943 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms