RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
PPP1CA-209ENST00000537694 ABCC9O60706 1549 aa34.48■■■■□ 3.11
PPP1CA-209ENST00000537694 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
PPP1CA-209ENST00000537694 RB1CC1Q8TDY2 1594 aa32.63■■■□□ 2.81
PPP1CA-209ENST00000537694 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
PPP1CA-209ENST00000537694 DNAJC5BQ9UF47 199 aa32.58■■■□□ 2.81
PPP1CA-209ENST00000537694 NACADO15069 1562 aa32.37■■■□□ 2.77
PPP1CA-209ENST00000537694 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
PPP1CA-209ENST00000537694 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
PPP1CA-209ENST00000537694 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
PPP1CA-209ENST00000537694 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
PPP1CA-209ENST00000537694 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
PPP1CA-209ENST00000537694 DCAF1Q9Y4B6 1507 aa31.37■■■□□ 2.61
PPP1CA-209ENST00000537694 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
PPP1CA-209ENST00000537694 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
PPP1CA-209ENST00000537694 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
PPP1CA-209ENST00000537694 CC2D2AQ9P2K1 1620 aa31.03■■■□□ 2.56
PPP1CA-209ENST00000537694 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
PPP1CA-209ENST00000537694 DNAJC5Q9H3Z4 198 aa30.02■■■□□ 2.4
PPP1CA-209ENST00000537694 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
PPP1CA-209ENST00000537694 ATAD2BQ9ULI0 1458 aa29.84■■■□□ 2.37
PPP1CA-209ENST00000537694 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
PPP1CA-209ENST00000537694 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
PPP1CA-209ENST00000537694 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
PPP1CA-209ENST00000537694 CUX2O14529 1486 aa29.68■■■□□ 2.34
PPP1CA-209ENST00000537694 HMGXB3Q12766 1538 aa29.6■■■□□ 2.33
PPP1CA-209ENST00000537694 NESP48681 1621 aa29.55■■■□□ 2.32
PPP1CA-209ENST00000537694 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
PPP1CA-209ENST00000537694 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
PPP1CA-209ENST00000537694 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
PPP1CA-209ENST00000537694 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
PPP1CA-209ENST00000537694 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
PPP1CA-209ENST00000537694 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
PPP1CA-209ENST00000537694 THOC2Q8NI27 1593 aaKnown RBP29.11■■■□□ 2.25
PPP1CA-209ENST00000537694 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
PPP1CA-209ENST00000537694 KIF21AQ7Z4S6 1674 aa29.03■■■□□ 2.24
PPP1CA-209ENST00000537694 WIZO95785 1651 aa28.98■■■□□ 2.23
PPP1CA-209ENST00000537694 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
PPP1CA-209ENST00000537694 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
PPP1CA-209ENST00000537694 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
PPP1CA-209ENST00000537694 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
PPP1CA-209ENST00000537694 WDR62O43379 1518 aa28.73■■■□□ 2.19
PPP1CA-209ENST00000537694 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
PPP1CA-209ENST00000537694 CFTRP13569 1480 aa28.66■■■□□ 2.18
PPP1CA-209ENST00000537694 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
PPP1CA-209ENST00000537694 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
PPP1CA-209ENST00000537694 URB2Q14146 1524 aaKnown RBP28.45■■■□□ 2.15
PPP1CA-209ENST00000537694 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
PPP1CA-209ENST00000537694 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
PPP1CA-209ENST00000537694 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
PPP1CA-209ENST00000537694 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
PPP1CA-209ENST00000537694 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
PPP1CA-209ENST00000537694 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
PPP1CA-209ENST00000537694 FBLN2P98095 1184 aa27.97■■■□□ 2.07
PPP1CA-209ENST00000537694 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.077e-8■■■■■ 41.6
PPP1CA-209ENST00000537694 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
PPP1CA-209ENST00000537694 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
PPP1CA-209ENST00000537694 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
PPP1CA-209ENST00000537694 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
PPP1CA-209ENST00000537694 CYB5RLQ6IPT4 315 aa27.92■■■□□ 2.06
PPP1CA-209ENST00000537694 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
PPP1CA-209ENST00000537694 ARHGEF11O15085 1522 aa27.86■■■□□ 2.05
PPP1CA-209ENST00000537694 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
PPP1CA-209ENST00000537694 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
PPP1CA-209ENST00000537694 SOGA1O94964 1423 aa27.82■■■□□ 2.04
PPP1CA-209ENST00000537694 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
PPP1CA-209ENST00000537694 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
PPP1CA-209ENST00000537694 CHD1O14646 1710 aa27.7■■■□□ 2.02
PPP1CA-209ENST00000537694 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
PPP1CA-209ENST00000537694 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
PPP1CA-209ENST00000537694 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
PPP1CA-209ENST00000537694 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
PPP1CA-209ENST00000537694 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
PPP1CA-209ENST00000537694 ARAP1Q96P48 1450 aa27.57■■■□□ 2
PPP1CA-209ENST00000537694 CUX1P39880 1505 aa27.57■■■□□ 2
PPP1CA-209ENST00000537694 GRIN2BQ13224 1484 aa27.51■■■□□ 2
PPP1CA-209ENST00000537694 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
PPP1CA-209ENST00000537694 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
PPP1CA-209ENST00000537694 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
PPP1CA-209ENST00000537694 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
PPP1CA-209ENST00000537694 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
PPP1CA-209ENST00000537694 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
PPP1CA-209ENST00000537694 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
PPP1CA-209ENST00000537694 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
PPP1CA-209ENST00000537694 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
PPP1CA-209ENST00000537694 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
PPP1CA-209ENST00000537694 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
PPP1CA-209ENST00000537694 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
PPP1CA-209ENST00000537694 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
PPP1CA-209ENST00000537694 NUP160Q12769 1436 aa27.03■■□□□ 1.92
PPP1CA-209ENST00000537694 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
PPP1CA-209ENST00000537694 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
PPP1CA-209ENST00000537694 ADAMTS12P58397 1594 aa27■■□□□ 1.91
PPP1CA-209ENST00000537694 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
PPP1CA-209ENST00000537694 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
PPP1CA-209ENST00000537694 JPH4Q96JJ6 628 aa26.96■■□□□ 1.91
PPP1CA-209ENST00000537694 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
PPP1CA-209ENST00000537694 PRG4Q92954 1404 aaPredicted RBP26.89■■□□□ 1.89
PPP1CA-209ENST00000537694 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
PPP1CA-209ENST00000537694 NPM1P06748 294 aaKnown RBP eCLIP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms