RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
CALR-206ENST00000588454 ABCC9O60706 1549 aa25.74■■□□□ 1.71
CALR-206ENST00000588454 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
CALR-206ENST00000588454 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
CALR-206ENST00000588454 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
CALR-206ENST00000588454 NACADO15069 1562 aa24.15■■□□□ 1.46
CALR-206ENST00000588454 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
CALR-206ENST00000588454 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
CALR-206ENST00000588454 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
CALR-206ENST00000588454 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
CALR-206ENST00000588454 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
CALR-206ENST00000588454 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
CALR-206ENST00000588454 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
CALR-206ENST00000588454 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
CALR-206ENST00000588454 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
CALR-206ENST00000588454 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
CALR-206ENST00000588454 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
CALR-206ENST00000588454 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
CALR-206ENST00000588454 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
CALR-206ENST00000588454 CUX2O14529 1486 aa22.33■■□□□ 1.16
CALR-206ENST00000588454 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
CALR-206ENST00000588454 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
CALR-206ENST00000588454 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
CALR-206ENST00000588454 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
CALR-206ENST00000588454 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
CALR-206ENST00000588454 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
CALR-206ENST00000588454 NESP48681 1621 aa22.03■■□□□ 1.12
CALR-206ENST00000588454 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
CALR-206ENST00000588454 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
CALR-206ENST00000588454 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
CALR-206ENST00000588454 THOC2Q8NI27 1593 aaKnown RBP21.85■■□□□ 1.09
CALR-206ENST00000588454 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
CALR-206ENST00000588454 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
CALR-206ENST00000588454 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
CALR-206ENST00000588454 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
CALR-206ENST00000588454 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
CALR-206ENST00000588454 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
CALR-206ENST00000588454 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
CALR-206ENST00000588454 WDR62O43379 1518 aa21.5■■□□□ 1.03
CALR-206ENST00000588454 WIZO95785 1651 aa21.44■■□□□ 1.02
CALR-206ENST00000588454 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
CALR-206ENST00000588454 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
CALR-206ENST00000588454 CFTRP13569 1480 aa21.31■■□□□ 1
CALR-206ENST00000588454 OSCARQ8IYS5 282 aa21.3■■□□□ 1
CALR-206ENST00000588454 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
CALR-206ENST00000588454 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
CALR-206ENST00000588454 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
CALR-206ENST00000588454 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
CALR-206ENST00000588454 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
CALR-206ENST00000588454 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
CALR-206ENST00000588454 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
CALR-206ENST00000588454 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
CALR-206ENST00000588454 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
CALR-206ENST00000588454 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
CALR-206ENST00000588454 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
CALR-206ENST00000588454 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
CALR-206ENST00000588454 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
CALR-206ENST00000588454 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
CALR-206ENST00000588454 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
CALR-206ENST00000588454 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
CALR-206ENST00000588454 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.925e-11■■■■□ 20.1
CALR-206ENST00000588454 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
CALR-206ENST00000588454 CHD1O14646 1710 aa20.72■□□□□ 0.91
CALR-206ENST00000588454 FBLN2P98095 1184 aa20.69■□□□□ 0.9
CALR-206ENST00000588454 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
CALR-206ENST00000588454 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
CALR-206ENST00000588454 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
CALR-206ENST00000588454 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
CALR-206ENST00000588454 SOGA1O94964 1423 aa20.6■□□□□ 0.89
CALR-206ENST00000588454 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
CALR-206ENST00000588454 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
CALR-206ENST00000588454 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
CALR-206ENST00000588454 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
CALR-206ENST00000588454 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CALR-206ENST00000588454 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
CALR-206ENST00000588454 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
CALR-206ENST00000588454 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
CALR-206ENST00000588454 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
CALR-206ENST00000588454 CUX1P39880 1505 aa20.43■□□□□ 0.86
CALR-206ENST00000588454 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
CALR-206ENST00000588454 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
CALR-206ENST00000588454 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
CALR-206ENST00000588454 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
CALR-206ENST00000588454 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.83
CALR-206ENST00000588454 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
CALR-206ENST00000588454 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
CALR-206ENST00000588454 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
CALR-206ENST00000588454 NUP160Q12769 1436 aa20.13■□□□□ 0.81
CALR-206ENST00000588454 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
CALR-206ENST00000588454 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
CALR-206ENST00000588454 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
CALR-206ENST00000588454 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
CALR-206ENST00000588454 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
CALR-206ENST00000588454 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
CALR-206ENST00000588454 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
CALR-206ENST00000588454 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
CALR-206ENST00000588454 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
CALR-206ENST00000588454 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
CALR-206ENST00000588454 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
CALR-206ENST00000588454 KIF13AQ9H1H9 1805 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms