RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
KDM1A-202ENST00000400181 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
KDM1A-202ENST00000400181 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.55
KDM1A-202ENST00000400181 HRCP23327 699 aa30.21■■■□□ 2.43
KDM1A-202ENST00000400181 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
KDM1A-202ENST00000400181 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
KDM1A-202ENST00000400181 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
KDM1A-202ENST00000400181 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.38
KDM1A-202ENST00000400181 PPARGC1BQ86YN6 1023 aaKnown RBP29.88■■■□□ 2.37
KDM1A-202ENST00000400181 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
KDM1A-202ENST00000400181 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
KDM1A-202ENST00000400181 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
KDM1A-202ENST00000400181 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
KDM1A-202ENST00000400181 TRIM26Q12899 539 aaPredicted RBP29.02■■■□□ 2.24
KDM1A-202ENST00000400181 EHMT2Q96KQ7 1210 aa28.76■■■□□ 2.19
KDM1A-202ENST00000400181 FAM9AQ8IZU1 332 aaPredicted RBP28.71■■■□□ 2.19
KDM1A-202ENST00000400181 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
KDM1A-202ENST00000400181 ZEB1P37275 1124 aaPredicted RBP28.52■■■□□ 2.16
KDM1A-202ENST00000400181 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
KDM1A-202ENST00000400181 PELP1Q8IZL8 1130 aaKnown RBP28.24■■■□□ 2.11
KDM1A-202ENST00000400181 RSF1Q96T23 1441 aaPredicted RBP28.2■■■□□ 2.11
KDM1A-202ENST00000400181 ABCC9O60706 1549 aa28.18■■■□□ 2.1
KDM1A-202ENST00000400181 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
KDM1A-202ENST00000400181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
KDM1A-202ENST00000400181 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
KDM1A-202ENST00000400181 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
KDM1A-202ENST00000400181 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
KDM1A-202ENST00000400181 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
KDM1A-202ENST00000400181 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
KDM1A-202ENST00000400181 DIEXFQ68CQ4 756 aaKnown RBP27.68■■■□□ 2.02
KDM1A-202ENST00000400181 GTF3C3Q9Y5Q9 886 aa27.67■■■□□ 2.02
KDM1A-202ENST00000400181 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
KDM1A-202ENST00000400181 CENPBP07199 599 aaPredicted RBP27.55■■■□□ 2
KDM1A-202ENST00000400181 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
KDM1A-202ENST00000400181 YTHDC1Q96MU7 727 aaKnown RBP27.42■■□□□ 1.98
KDM1A-202ENST00000400181 WIZO95785 1651 aa27.39■■□□□ 1.98
KDM1A-202ENST00000400181 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
KDM1A-202ENST00000400181 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
KDM1A-202ENST00000400181 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
KDM1A-202ENST00000400181 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
KDM1A-202ENST00000400181 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
KDM1A-202ENST00000400181 HNRNPUL2Q1KMD3 747 aaKnown RBP27.1■■□□□ 1.93
KDM1A-202ENST00000400181 SOGA1O94964 1423 aa27.09■■□□□ 1.93
KDM1A-202ENST00000400181 MIER1Q8N108 512 aa27.04■■□□□ 1.92
KDM1A-202ENST00000400181 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
KDM1A-202ENST00000400181 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
KDM1A-202ENST00000400181 NACADO15069 1562 aa27■■□□□ 1.91
KDM1A-202ENST00000400181 CSRNP3Q8WYN3 585 aa26.99■■□□□ 1.91
KDM1A-202ENST00000400181 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
KDM1A-202ENST00000400181 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
KDM1A-202ENST00000400181 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
KDM1A-202ENST00000400181 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
KDM1A-202ENST00000400181 MYT1Q01538 1121 aa26.9■■□□□ 1.9
KDM1A-202ENST00000400181 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
KDM1A-202ENST00000400181 SMARCA2P51531 1590 aa26.7■■□□□ 1.86
KDM1A-202ENST00000400181 APLP2Q06481 763 aa26.69■■□□□ 1.86
KDM1A-202ENST00000400181 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
KDM1A-202ENST00000400181 EEA1Q15075 1411 aa26.63■■□□□ 1.85
KDM1A-202ENST00000400181 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
KDM1A-202ENST00000400181 CLIP1P30622 1438 aa26.55■■□□□ 1.84
KDM1A-202ENST00000400181 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
KDM1A-202ENST00000400181 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
KDM1A-202ENST00000400181 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.82
KDM1A-202ENST00000400181 SUPT16HQ9Y5B9 1047 aaKnown RBP26.37■■□□□ 1.81
KDM1A-202ENST00000400181 RAPGEF2Q9Y4G8 1499 aa26.32■■□□□ 1.8
KDM1A-202ENST00000400181 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
KDM1A-202ENST00000400181 ITGAEP38570 1179 aa26.27■■□□□ 1.8
KDM1A-202ENST00000400181 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
KDM1A-202ENST00000400181 KANK4Q5T7N3 995 aaPredicted RBP26.21■■□□□ 1.79
KDM1A-202ENST00000400181 KIF21BO75037 1637 aa26.21■■□□□ 1.79
KDM1A-202ENST00000400181 KCNH8Q96L42 1107 aa26.16■■□□□ 1.78
KDM1A-202ENST00000400181 BCANQ96GW7 911 aa26.16■■□□□ 1.78
KDM1A-202ENST00000400181 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
KDM1A-202ENST00000400181 TSHZ2Q9NRE2 1034 aa26.12■■□□□ 1.77
KDM1A-202ENST00000400181 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
KDM1A-202ENST00000400181 CLSPNQ9HAW4 1339 aa26.07■■□□□ 1.76
KDM1A-202ENST00000400181 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
KDM1A-202ENST00000400181 FKBP8Q14318 412 aa25.91■■□□□ 1.74
KDM1A-202ENST00000400181 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
KDM1A-202ENST00000400181 ANP32EQ9BTT0 268 aa25.89■■□□□ 1.74
KDM1A-202ENST00000400181 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
KDM1A-202ENST00000400181 HIRIP3Q9BW71 556 aaPredicted RBP25.85■■□□□ 1.73
KDM1A-202ENST00000400181 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
KDM1A-202ENST00000400181 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
KDM1A-202ENST00000400181 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
KDM1A-202ENST00000400181 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
KDM1A-202ENST00000400181 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
KDM1A-202ENST00000400181 RAB3GAP2Q9H2M9 1393 aa25.77■■□□□ 1.72
KDM1A-202ENST00000400181 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
KDM1A-202ENST00000400181 TRIM52Q96A61 297 aa25.75■■□□□ 1.71
KDM1A-202ENST00000400181 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
KDM1A-202ENST00000400181 FAM50AQ14320 339 aaKnown RBP25.72■■□□□ 1.71
KDM1A-202ENST00000400181 ATP1B4Q9UN42 357 aaPredicted RBP25.71■■□□□ 1.71
KDM1A-202ENST00000400181 NEFLP07196 543 aa25.68■■□□□ 1.7
KDM1A-202ENST00000400181 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
KDM1A-202ENST00000400181 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
KDM1A-202ENST00000400181 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
KDM1A-202ENST00000400181 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
KDM1A-202ENST00000400181 MAPKBP1O60336 1514 aa25.59■■□□□ 1.69
KDM1A-202ENST00000400181 CUX2O14529 1486 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms